© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2380 |
| Gene name | |
| Location | Contig_1568:459..2630 |
| Strand | + |
| Gene length (bp) | 2171 |
| Transcript length (bp) | 1959 |
| Coding sequence length (bp) | 1959 |
| Protein length (aa) | 653 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8IDX6|RBP2A_PLAF7 | Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0198 PE=3 SV=1 | 292 | 451 | 2.0E-10 |
| sp|Q8IDX6|RBP2A_PLAF7 | Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0198 PE=3 SV=1 | 283 | 469 | 2.0E-08 |
| sp|Q8IDX6|RBP2A_PLAF7 | Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0198 PE=3 SV=1 | 291 | 482 | 8.0E-08 |
| sp|Q8IID4|DYHC2_PLAF7 | Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0240 PE=3 SV=1 | 272 | 428 | 2.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.7129 | 0.4701 | 0.0568 | 0.2556 | 0.1067 | 0.0142 | 0.1839 | 0.0848 | 0.1265 | 0.012 |
| Orthofinder run ID | 4 |
| Orthogroup | 2064 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2380 MPLKRRPAKITIHTGGESSRSTSYNSEEDSSQHDQDYSPVDGEWEDDEPEYYEDEEVNPSDSASASNEVPPSRPP TAARSTPRHHRQSRQETPYPSVREPAPNPPSLDPSEEFSGHYGHAFQPHPAHRGGGGYYGGRGNAHLYSQNHGNH YMAGYPGGNQMVPYGNYGPNPFTPMSNNNSSGASYFGGGEQRHMYDMMPYQPGAFYGAPQYNLPAHMQQFHLSPP PPPATEAPAQPASPAPPKEPPVDIEKIKLEAQIAALKAQEDKQKALDEQRERDAQIRKETEESIFRKMEEMKKAQ EEAQKEIARAKADADAAAVARLAAERQAAEERLRQEADAIQRAEEKAIKKYEADQKAAEEQRKREQEERVRIEEA ARARYEAAMKAEAEAKAAAEKRAAEEAEKLKQLQEEARRKAEAEVLAKVEAEKEAAKKAAEAEAAAKKEQELLKK RIQDEAKAKFEEAAKKSEKGPIKFKDAVGRKFSFPFHLCNTWQGMEELIKQAFLHVDVIGPHVQEGHYDLIGPNG DIILPSVWEKTVEPEWSISMTMWPVEKMPPLGPKMPPPPRGRGQGPGMPPPPPMAGIPMPRPGMPMPPGMAPHPD WEPERRRPGHVPAGINVVNVNPPTKSSKPSKRNSAMLTFFAGKPTKKKTSKK* |
| Coding | >Hirsu2|2380 ATGCCGCTAAAAAGACGGCCGGCCAAAATCACCATCCACACGGGCGGCGAGAGCTCCCGGTCGACTTCCTACAAT AGCGAGGAGGATTCATCGCAGCACGACCAAGACTACTCCCCCGTCGACGGCGAGTGGGAAGACGACGAGCCCGAG TACTACGAAGACGAAGAAGTCAACCCGTCCGACTCTGCTTCGGCCAGCAACGAGGTGCCGCCCTCGCGACCGCCA ACAGCCGCCAGGAGCACGCCCCGGCATCACCGACAGTCCCGTCAGGAAACTCCCTATCCCTCCGTGCGGGAGCCC GCACCCAATCCGCCCAGCCTGGATCCCTCCGAAGAGTTCAGCGGCCACTACGGCCATGCTTTCCAGCCCCATCCC GCCCACCGTGGCGGCGGCGGCTACTACGGTGGGCGCGGAAATGCCCATCTTTACTCGCAAAACCACGGCAACCAC TACATGGCCGGCTATCCCGGCGGCAACCAGATGGTGCCGTACGGCAACTATGGCCCCAACCCATTCACCCCCATG AGCAATAACAACTCGAGCGGCGCCAGCTACTTCGGCGGCGGCGAACAGAGGCACATGTATGACATGATGCCCTAC CAGCCCGGTGCCTTCTACGGCGCGCCGCAGTATAATCTGCCCGCCCACATGCAGCAATTCCACCTCTCGCCGCCC CCGCCTCCTGCCACCGAGGCTCCCGCCCAGCCTGCCAGCCCGGCGCCCCCGAAGGAGCCTCCCGTCGACATCGAA AAGATCAAGCTTGAGGCCCAGATTGCCGCCCTCAAGGCTCAGGAGGACAAGCAAAAGGCCCTCGACGAGCAGCGA GAAAGAGACGCCCAGATCCGCAAAGAAACCGAGGAGTCCATCTTCCGAAAGATGGAGGAGATGAAGAAGGCGCAA GAGGAGGCTCAGAAGGAGATTGCGCGCGCCAAGGCAGATGCCGATGCCGCCGCCGTGGCGAGATTGGCGGCCGAG CGCCAGGCGGCTGAGGAGAGGTTGCGCCAGGAGGCCGATGCCATTCAGCGCGCAGAGGAAAAGGCGATCAAAAAG TACGAGGCCGACCAGAAGGCGGCCGAAGAGCAACGGAAGCGGGAGCAAGAAGAGCGCGTCAGGATCGAGGAAGCG GCAAGGGCTCGCTACGAGGCGGCCATGAAGGCAGAAGCCGAGGCCAAGGCAGCTGCCGAGAAGAGGGCTGCCGAG GAGGCTGAGAAACTGAAACAGCTGCAGGAGGAGGCCAGGCGCAAAGCCGAAGCCGAAGTCCTGGCCAAGGTCGAA GCTGAAAAGGAGGCGGCCAAGAAGGCGGCCGAGGCCGAAGCGGCCGCCAAGAAAGAACAGGAACTCCTCAAGAAA CGGATCCAGGACGAGGCCAAGGCCAAGTTCGAAGAGGCGGCAAAGAAGTCGGAGAAGGGGCCGATCAAGTTCAAA GACGCCGTCGGACGCAAGTTTAGCTTTCCCTTCCATCTCTGCAACACGTGGCAGGGCATGGAGGAGCTCATCAAA CAAGCCTTCCTGCACGTCGACGTGATTGGGCCCCACGTGCAGGAGGGCCATTACGACTTGATCGGTCCAAACGGC GACATCATCCTTCCTTCTGTGTGGGAAAAGACAGTCGAGCCGGAATGGTCAATCAGTATGACCATGTGGCCGGTA GAGAAGATGCCGCCACTCGGCCCCAAGATGCCGCCACCTCCCCGCGGTCGCGGCCAAGGGCCCGGTATGCCTCCC CCGCCACCAATGGCGGGCATTCCCATGCCGCGGCCGGGCATGCCGATGCCTCCGGGCATGGCGCCCCATCCGGAC TGGGAGCCAGAACGACGGCGGCCGGGCCACGTCCCCGCGGGTATAAACGTTGTCAATGTCAATCCGCCGACGAAG TCGAGCAAGCCGAGCAAGAGGAATTCGGCCATGCTGACCTTCTTTGCCGGCAAGCCTACCAAAAAGAAGACGAGC AAGAAATGA |
| Transcript | >Hirsu2|2380 ATGCCGCTAAAAAGACGGCCGGCCAAAATCACCATCCACACGGGCGGCGAGAGCTCCCGGTCGACTTCCTACAAT AGCGAGGAGGATTCATCGCAGCACGACCAAGACTACTCCCCCGTCGACGGCGAGTGGGAAGACGACGAGCCCGAG TACTACGAAGACGAAGAAGTCAACCCGTCCGACTCTGCTTCGGCCAGCAACGAGGTGCCGCCCTCGCGACCGCCA ACAGCCGCCAGGAGCACGCCCCGGCATCACCGACAGTCCCGTCAGGAAACTCCCTATCCCTCCGTGCGGGAGCCC GCACCCAATCCGCCCAGCCTGGATCCCTCCGAAGAGTTCAGCGGCCACTACGGCCATGCTTTCCAGCCCCATCCC GCCCACCGTGGCGGCGGCGGCTACTACGGTGGGCGCGGAAATGCCCATCTTTACTCGCAAAACCACGGCAACCAC TACATGGCCGGCTATCCCGGCGGCAACCAGATGGTGCCGTACGGCAACTATGGCCCCAACCCATTCACCCCCATG AGCAATAACAACTCGAGCGGCGCCAGCTACTTCGGCGGCGGCGAACAGAGGCACATGTATGACATGATGCCCTAC CAGCCCGGTGCCTTCTACGGCGCGCCGCAGTATAATCTGCCCGCCCACATGCAGCAATTCCACCTCTCGCCGCCC CCGCCTCCTGCCACCGAGGCTCCCGCCCAGCCTGCCAGCCCGGCGCCCCCGAAGGAGCCTCCCGTCGACATCGAA AAGATCAAGCTTGAGGCCCAGATTGCCGCCCTCAAGGCTCAGGAGGACAAGCAAAAGGCCCTCGACGAGCAGCGA GAAAGAGACGCCCAGATCCGCAAAGAAACCGAGGAGTCCATCTTCCGAAAGATGGAGGAGATGAAGAAGGCGCAA GAGGAGGCTCAGAAGGAGATTGCGCGCGCCAAGGCAGATGCCGATGCCGCCGCCGTGGCGAGATTGGCGGCCGAG CGCCAGGCGGCTGAGGAGAGGTTGCGCCAGGAGGCCGATGCCATTCAGCGCGCAGAGGAAAAGGCGATCAAAAAG TACGAGGCCGACCAGAAGGCGGCCGAAGAGCAACGGAAGCGGGAGCAAGAAGAGCGCGTCAGGATCGAGGAAGCG GCAAGGGCTCGCTACGAGGCGGCCATGAAGGCAGAAGCCGAGGCCAAGGCAGCTGCCGAGAAGAGGGCTGCCGAG GAGGCTGAGAAACTGAAACAGCTGCAGGAGGAGGCCAGGCGCAAAGCCGAAGCCGAAGTCCTGGCCAAGGTCGAA GCTGAAAAGGAGGCGGCCAAGAAGGCGGCCGAGGCCGAAGCGGCCGCCAAGAAAGAACAGGAACTCCTCAAGAAA CGGATCCAGGACGAGGCCAAGGCCAAGTTCGAAGAGGCGGCAAAGAAGTCGGAGAAGGGGCCGATCAAGTTCAAA GACGCCGTCGGACGCAAGTTTAGCTTTCCCTTCCATCTCTGCAACACGTGGCAGGGCATGGAGGAGCTCATCAAA CAAGCCTTCCTGCACGTCGACGTGATTGGGCCCCACGTGCAGGAGGGCCATTACGACTTGATCGGTCCAAACGGC GACATCATCCTTCCTTCTGTGTGGGAAAAGACAGTCGAGCCGGAATGGTCAATCAGTATGACCATGTGGCCGGTA GAGAAGATGCCGCCACTCGGCCCCAAGATGCCGCCACCTCCCCGCGGTCGCGGCCAAGGGCCCGGTATGCCTCCC CCGCCACCAATGGCGGGCATTCCCATGCCGCGGCCGGGCATGCCGATGCCTCCGGGCATGGCGCCCCATCCGGAC TGGGAGCCAGAACGACGGCGGCCGGGCCACGTCCCCGCGGGTATAAACGTTGTCAATGTCAATCCGCCGACGAAG TCGAGCAAGCCGAGCAAGAGGAATTCGGCCATGCTGACCTTCTTTGCCGGCAAGCCTACCAAAAAGAAGACGAGC AAGAAATGA |
| Gene | >Hirsu2|2380 ATGCCGTGAGTCGAGTCCCGCCATCCGTCTCCCTGGCCACTCATCCGCATGATCGACGCCTCCCGCCGTCTTCAA CCGCTTACCGCTGACCAGGCTAAAAAGACGGCCGGCCAAAATCACCATCCACACGGGCGGCGAGAGCTCCCGGTC GACTTCCTACAATAGCGAGGAGGATTCATCGCAGCACGACCAAGACTACTCCCCCGTCGACGGCGAGTGGGAAGA CGACGAGCCCGAGTACTACGAAGACGAAGAAGTCAACCCGTCCGACTCTGCTTCGGCCAGCAACGAGGTGCCGCC CTCGCGACCGCCAACAGCCGCCAGGAGCACGCCCCGGCATCACCGACAGTCCCGTCAGGAAACTCCCTATCCCTC CGTGCGGGAGCCCGCACCCAATCCGCCCAGCCTGGATCCCTCCGAAGAGTTCAGCGGCCACTACGGCCATGCTTT CCAGCCCCATCCCGCCCACCGTGGCGGCGGCGGCTACTACGGTGGGCGCGGAAATGCCCATCTTTACTCGCAAAA CCACGGCAACCACTACATGGCCGGCTATCCCGGCGGCAACCAGATGGTGCCGTACGGCAACTATGGCCCCAACCC ATTCACCCCCATGAGCAATAACAACTCGAGCGGCGCCAGCTACTTCGGCGGCGGCGAACAGAGGCACATGTATGA CATGATGCCCTACCAGCCCGGTGCCTTCTACGGCGCGCCGCAGTATAATCTGCCCGCCCACATGCAGCAATTCCA CCTCTCGCCGCCCCCGCCTCCTGCCACCGAGGCTCCCGCCCAGCCTGCCAGCCCGGCGCCCCCGAAGGAGCCTCC CGTCGACATCGAAAAGATCAAGCTTGAGGCCCAGATTGCCGCCCTCAAGGCTCAGGAGGACAAGCAAAAGGCCCT CGACGAGCAGCGAGAAAGAGACGCCCAGATCCGCAAAGAAACCGAGGAGTCCATCTTCCGAAAGATGGAGGAGAT GAAGAAGGCGCAAGAGGAGGCTCAGAAGGAGATTGCGCGCGCCAAGGCAGATGCCGATGCCGCCGCCGTGGCGAG ATTGGCGGCCGAGCGCCAGGCGGCTGAGGAGAGGTTGCGCCAGGAGGCCGATGCCATTCAGCGCGCAGAGGAAAA GGCGATCAAAAAGTACGAGGCCGACCAGAAGGCGGCCGAAGAGCAACGGAAGCGGGAGCAAGAAGAGCGCGTCAG GATCGAGGAAGCGGCAAGGGCTCGCTACGAGGCGGCCATGAAGGCAGAAGCCGAGGCCAAGGCAGCTGCCGAGAA GAGGGCTGCCGAGGAGGCTGAGAAACTGAAACAGCTGCAGGAGGAGGCCAGGCGCAAAGCCGAAGCCGAAGTCCT GGCCAAGGTCGAAGCTGAAAAGGAGGCGGCCAAGAAGGCGGCCGAGGCCGAAGCGGCCGCCAAGAAAGAACAGGA ACTCCTCAAGAAACGGATCCAGGACGAGGCCAAGGCCAAGTTCGAAGAGGCGGCAAAGAAGTCGGAGAAGGGGCC GATCAAGTTCAAAGACGCCGTCGGACGCAAGTTTAGCTTTCCCTTCCATCTCTGCAACACGTGGCAGGTATGTCA TCGGCACCTCATCACATCACCATGTCCGCCTTGTCTGCTAACCCCAGTTTGCTCAGGGCATGGAGGAGCTCATCA AACAAGCCTTCCTGCACGTCGACGTGATTGGGCCCCACGTGCAGGAGGGCCATTACGACTTGATCGGTCCAAACG GCGACATCATCCTTCCTTCTGTGTGGGAAAAGACAGTCGAGCCGGAATGGTCAATCAGTATGACCATGTGGCCGG TAGAGAAGATGCCGCCACTCGGCCCCAAGATGCCGCCACCTCCCCGCGGTCGCGGCCAAGGGCCCGGTATGCCTC CCCCGCCACCAATGGCGGGCATTCCCATGCCGCGGCCGGGCATGCCGATGCCTCCGGGCATGGCGCCCCATCCGG ACTGGGAGCCAGAACGACGGCGGCCGGGCCACGTCCCCGCGGGTATAAACGTTGTCAATGTCAATCCGCCGACGA AGTCGAGCAAGCCGAGCAAGAGGAATTCGGCCATGCTGACCTTCTTTGCCGGCAAGCCTACCAAAAAGAAGTAAG GACAGATGGTGCCACTTTTCCTCGGCCCGTCCCGTTACTGACGCGAGAGATACAGGACGAGCAAGAAATGA |