Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2379
Gene name
LocationContig_1567:3930..5188
Strand+
Gene length (bp)1258
Transcript length (bp)1206
Coding sequence length (bp)1206
Protein length (aa) 402

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02184 HAT HAT (Half-A-TPR) repeat 1.4E-05 86 112
PF02184 HAT HAT (Half-A-TPR) repeat 1.3E-11 188 218
PF14559 TPR_19 Tetratricopeptide repeat 1.6E-06 83 135

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3 SV=1 1 399 0.0E+00
sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1 PE=3 SV=2 1 399 0.0E+00
sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1 1 398 0.0E+00
sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis GN=CLF1 PE=3 SV=1 1 399 0.0E+00
sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=clf-1 PE=3 SV=1 1 399 0.0E+00
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3 SV=1 1 399 0.0E+00
sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1 PE=3 SV=2 1 399 0.0E+00
sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1 1 398 0.0E+00
sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis GN=CLF1 PE=3 SV=1 1 399 0.0E+00
sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=clf-1 PE=3 SV=1 1 399 0.0E+00
sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf4 PE=1 SV=1 8 401 7.0E-177
sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=1 SV=1 9 399 1.0E-167
sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2 SV=1 9 399 1.0E-167
sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4 9 399 8.0E-165
sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2 9 399 6.0E-159
sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CLF1 PE=3 SV=1 9 399 1.0E-158
sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CLF1 PE=3 SV=1 8 398 1.0E-156
sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1 8 398 3.0E-156
sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CLF1 PE=3 SV=1 8 398 3.0E-156
sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CLF1 PE=3 SV=1 4 399 1.0E-155
sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1 PE=3 SV=1 6 401 3.0E-151
sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CLF1 PE=3 SV=2 19 398 1.0E-97
sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CLF1 PE=3 SV=2 19 399 8.0E-97
sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CLF1 PE=3 SV=1 20 399 1.0E-89
sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1 14 398 7.0E-87
sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3 SV=1 46 399 2.0E-84
sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1 PE=3 SV=1 19 397 3.0E-76
sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4 75 400 8.0E-21
sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2 SV=1 75 400 8.0E-19
sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=1 SV=1 75 400 8.0E-19
sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=1 SV=1 73 352 7.0E-17
sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=1 SV=1 73 352 1.0E-16
sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1 73 390 2.0E-16
sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2 43 400 2.0E-16
sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1 73 366 4.0E-16
sp|Q5RCC2|PRP6_PONAB Pre-mRNA-processing factor 6 OS=Pongo abelii GN=PRPF6 PE=2 SV=1 73 390 8.0E-16
sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis GN=CLF1 PE=3 SV=1 75 400 2.0E-15
sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CLF1 PE=3 SV=1 55 357 5.0E-15
sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CLF1 PE=3 SV=1 55 357 5.0E-15
sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1 55 357 5.0E-15
sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1 PE=3 SV=2 75 400 3.0E-14
sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1 75 400 5.0E-14
sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2 75 327 8.0E-13
sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CLF1 PE=3 SV=1 83 392 1.0E-12
sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CLF1 PE=3 SV=1 56 365 1.0E-11
sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf4 PE=1 SV=1 72 345 1.0E-11
sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prp1 PE=1 SV=1 74 390 2.0E-11
sp|Q8RWG2|CF107_ARATH Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana GN=HCF107 PE=1 SV=1 75 344 3.0E-11
sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2 SV=1 43 357 3.0E-11
sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=1 SV=1 43 357 3.0E-11
sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=SYF1 PE=3 SV=1 86 229 4.0E-11
sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4 75 338 4.0E-11
sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1 86 229 4.0E-11
sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2 SV=1 75 247 6.0E-11
sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=1 SV=1 75 247 6.0E-11
sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf3 PE=1 SV=1 90 379 2.0E-10
sp|Q05022|RRP5_YEAST rRNA biogenesis protein RRP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP5 PE=1 SV=1 95 358 4.0E-10
sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=SYF1 PE=3 SV=1 90 296 1.0E-09
sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1 PE=3 SV=2 72 216 1.0E-09
sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1 90 296 1.0E-09
sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2 70 229 2.0E-09
sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=clf-1 PE=3 SV=1 56 336 2.0E-09
sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas reinhardtii GN=MBB1 PE=2 SV=1 83 401 4.0E-09
sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1 PE=3 SV=2 55 336 4.0E-09
sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=1 SV=2 95 364 6.0E-09
sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3 95 364 7.0E-09
sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1 75 216 8.0E-09
sp|Q8RWG2|CF107_ARATH Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana GN=HCF107 PE=1 SV=1 61 228 9.0E-09
sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3 22 234 2.0E-08
sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3 SV=1 72 216 3.0E-08
sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1 PE=3 SV=1 75 278 3.0E-08
sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis GN=CLF1 PE=3 SV=1 72 216 3.0E-08
sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1 PE=3 SV=1 70 229 5.0E-08
sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=msp-41 PE=3 SV=1 70 229 5.0E-08
sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas reinhardtii GN=MBB1 PE=2 SV=1 68 366 7.0E-08
sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CLF1 PE=3 SV=1 78 394 8.0E-08
sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CLF1 PE=3 SV=1 74 399 8.0E-08
sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=1 SV=2 22 234 9.0E-08
sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1 89 396 2.0E-07
sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1 22 234 2.0E-07
sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3 SV=1 70 229 3.0E-07
sp|Q54Z08|SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2 PE=3 SV=1 75 380 4.0E-07
sp|Q5RDW9|CSTF3_PONAB Cleavage stimulation factor subunit 3 OS=Pongo abelii GN=CSTF3 PE=2 SV=1 48 394 5.0E-07
sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SYF1 PE=3 SV=1 91 361 6.0E-07
sp|Q9ZT71|STA1_ARATH Protein STABILIZED1 OS=Arabidopsis thaliana GN=STA1 PE=1 SV=1 91 284 6.0E-07
sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1 42 343 7.0E-07
sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3 SV=1 44 394 7.0E-07
sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf3 PE=1 SV=1 88 353 7.0E-07
sp|Q99LI7|CSTF3_MOUSE Cleavage stimulation factor subunit 3 OS=Mus musculus GN=Cstf3 PE=1 SV=1 48 394 8.0E-07
sp|Q12996|CSTF3_HUMAN Cleavage stimulation factor subunit 3 OS=Homo sapiens GN=CSTF3 PE=1 SV=1 48 394 8.0E-07
sp|Q9ZT71|STA1_ARATH Protein STABILIZED1 OS=Arabidopsis thaliana GN=STA1 PE=1 SV=1 44 233 1.0E-06
sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas reinhardtii GN=MBB1 PE=2 SV=1 78 228 2.0E-06
sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2 67 306 2.0E-06
sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2 65 205 2.0E-06
sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=1 SV=1 65 205 2.0E-06
sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2 SV=1 65 205 2.0E-06
sp|Q5RCC2|PRP6_PONAB Pre-mRNA-processing factor 6 OS=Pongo abelii GN=PRPF6 PE=2 SV=1 89 396 3.0E-06
sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=1 SV=1 90 229 3.0E-06
sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=1 SV=1 67 306 3.0E-06
sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2 SV=1 90 229 3.0E-06
sp|Q9ZT71|STA1_ARATH Protein STABILIZED1 OS=Arabidopsis thaliana GN=STA1 PE=1 SV=1 71 389 4.0E-06
sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2 SV=1 67 306 4.0E-06
sp|F4J8K6|RRP5_ARATH rRNA biogenesis protein RRP5 OS=Arabidopsis thaliana GN=RRP5 PE=2 SV=2 157 353 4.0E-06
sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1 111 275 5.0E-06
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GO

GO Term Description Terminal node
GO:0006396 RNA processing Yes
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0090304 nucleic acid metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0044238 primary metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0008150 biological_process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3372 0.5684 0.0125 0.1635 0.0596 0.0022 0.1037 0.2997 0.3641 0.0055

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup519
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6230
Ophiocordyceps australis 1348a (Ghana) OphauG2|918
Ophiocordyceps australis map64 (Brazil) OphauB2|2593
Ophiocordyceps australis map64 (Brazil) OphauB2|3503
Ophiocordyceps camponoti-floridani Ophcf2|00155
Ophiocordyceps camponoti-rufipedis Ophun1|7160
Ophiocordyceps kimflemingae Ophio5|631
Ophiocordyceps subramaniannii Hirsu2|2379 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2379
MESSRGPPRVKNKAAAPVQISAEQLLREAVDRQEVSLQAPTQRFSDLEELHEYQGRKRKEFEDYVRRNRVSLHNW
TQYAQWELEQKEFLRARSVFERALDVHPHNVQLWVRYIEAEMKSRNINHARNLLDRAVTTLPRVDKLWYKYVYME
EMLGNIPGTRQVFDRWMQWQPDEAAWSAYIKLEKRYGEFERARDIFRTFTMVHPEPRNWIKWTKFEEEHGTSDGV
REVFGAAVEALGDDLVDERLFIAYARFESKLKEYERARAIYKYALDRLPRSRAMQLHKAYTTFEKQFGDRDGVED
VVLSKRRRLYEEQVKDNAKNYDAWFDYAALEESSGDADRVRDVYERAVAQVPPTQEKRHWRRYIYLWIFYAVWEE
LEGRDAERTRQIYSLCLSLIPHKKAS*
Coding >Hirsu2|2379
ATGGAGTCCTCGAGAGGCCCACCGCGCGTCAAGAACAAGGCCGCCGCGCCGGTTCAGATCAGCGCCGAGCAGCTC
CTGCGCGAAGCCGTCGACCGGCAGGAGGTGTCCCTTCAGGCGCCGACGCAGCGGTTCAGCGACCTCGAGGAGCTG
CACGAGTATCAGGGCAGGAAGCGCAAGGAGTTCGAGGACTACGTGCGGCGGAACCGGGTCAGCCTCCACAACTGG
ACCCAGTACGCGCAATGGGAGCTGGAGCAGAAGGAGTTCTTGCGCGCGCGCTCCGTCTTCGAGCGGGCGCTCGAC
GTGCACCCGCACAACGTGCAGCTATGGGTTCGGTACATCGAGGCGGAGATGAAGTCGCGCAACATCAACCACGCG
CGCAACCTGCTGGACCGGGCCGTGACGACGCTGCCCCGCGTGGACAAGCTGTGGTACAAGTACGTGTACATGGAG
GAGATGCTGGGCAACATCCCGGGCACGAGGCAGGTGTTCGACCGGTGGATGCAGTGGCAGCCGGACGAGGCGGCG
TGGAGCGCGTACATCAAGCTGGAGAAGCGGTACGGCGAGTTCGAGAGGGCGCGCGACATCTTCCGGACCTTCACC
ATGGTCCACCCGGAGCCGCGCAACTGGATCAAGTGGACCAAGTTCGAGGAGGAGCACGGGACGAGCGACGGGGTG
CGCGAGGTGTTCGGGGCCGCGGTCGAGGCGCTCGGCGACGACCTGGTCGACGAACGGCTCTTCATCGCCTACGCG
CGGTTCGAGTCGAAGCTCAAGGAGTACGAGCGGGCGCGGGCCATCTACAAGTACGCGCTGGACCGGCTGCCGCGG
TCGCGGGCGATGCAGCTGCACAAGGCCTACACGACGTTCGAGAAGCAGTTCGGCGACCGGGACGGCGTCGAGGAC
GTGGTGCTGTCGAAGCGGAGGAGGCTGTACGAGGAGCAGGTCAAGGACAACGCCAAGAACTACGACGCCTGGTTC
GACTACGCCGCGCTGGAGGAGTCGTCGGGCGACGCGGACCGGGTGCGGGACGTGTACGAGCGGGCGGTGGCGCAG
GTGCCGCCGACGCAGGAGAAGCGGCACTGGCGGCGCTACATCTACCTCTGGATCTTCTACGCCGTCTGGGAGGAG
CTCGAGGGCCGGGACGCGGAGCGGACGCGGCAGATCTACAGCCTGTGCCTGTCGCTGATACCGCACAAGAAGGCC
AGCTGA
Transcript >Hirsu2|2379
ATGGAGTCCTCGAGAGGCCCACCGCGCGTCAAGAACAAGGCCGCCGCGCCGGTTCAGATCAGCGCCGAGCAGCTC
CTGCGCGAAGCCGTCGACCGGCAGGAGGTGTCCCTTCAGGCGCCGACGCAGCGGTTCAGCGACCTCGAGGAGCTG
CACGAGTATCAGGGCAGGAAGCGCAAGGAGTTCGAGGACTACGTGCGGCGGAACCGGGTCAGCCTCCACAACTGG
ACCCAGTACGCGCAATGGGAGCTGGAGCAGAAGGAGTTCTTGCGCGCGCGCTCCGTCTTCGAGCGGGCGCTCGAC
GTGCACCCGCACAACGTGCAGCTATGGGTTCGGTACATCGAGGCGGAGATGAAGTCGCGCAACATCAACCACGCG
CGCAACCTGCTGGACCGGGCCGTGACGACGCTGCCCCGCGTGGACAAGCTGTGGTACAAGTACGTGTACATGGAG
GAGATGCTGGGCAACATCCCGGGCACGAGGCAGGTGTTCGACCGGTGGATGCAGTGGCAGCCGGACGAGGCGGCG
TGGAGCGCGTACATCAAGCTGGAGAAGCGGTACGGCGAGTTCGAGAGGGCGCGCGACATCTTCCGGACCTTCACC
ATGGTCCACCCGGAGCCGCGCAACTGGATCAAGTGGACCAAGTTCGAGGAGGAGCACGGGACGAGCGACGGGGTG
CGCGAGGTGTTCGGGGCCGCGGTCGAGGCGCTCGGCGACGACCTGGTCGACGAACGGCTCTTCATCGCCTACGCG
CGGTTCGAGTCGAAGCTCAAGGAGTACGAGCGGGCGCGGGCCATCTACAAGTACGCGCTGGACCGGCTGCCGCGG
TCGCGGGCGATGCAGCTGCACAAGGCCTACACGACGTTCGAGAAGCAGTTCGGCGACCGGGACGGCGTCGAGGAC
GTGGTGCTGTCGAAGCGGAGGAGGCTGTACGAGGAGCAGGTCAAGGACAACGCCAAGAACTACGACGCCTGGTTC
GACTACGCCGCGCTGGAGGAGTCGTCGGGCGACGCGGACCGGGTGCGGGACGTGTACGAGCGGGCGGTGGCGCAG
GTGCCGCCGACGCAGGAGAAGCGGCACTGGCGGCGCTACATCTACCTCTGGATCTTCTACGCCGTCTGGGAGGAG
CTCGAGGGCCGGGACGCGGAGCGGACGCGGCAGATCTACAGCCTGTGCCTGTCGCTGATACCGCACAAGAAGGCC
AGCTGA
Gene >Hirsu2|2379
ATGGAGTCCTCGAGAGGCCCACCGCGCGTCAAGAACAAGGCCGCCGCGCCGGTTCAGATCAGCGCCGAGCAGCTC
CTGCGCGAAGCCGTCGACCGGCAGGAGGTGTCCCTTCAGGCGCCGACGCAGCGGTTCAGCGACCTCGAGGAGCTG
CACGAGTATCAGGGCAGGAAGCGCAAGGAGTTCGAGGACTACGTGCGGCGGAACCGGGTCAGCCTCCACAACTGG
ACCCAGTACGCGCAATGGGAGCTGGAGCAGAAGGAGTTCTTGCGCGCGCGCTCCGTCTTCGAGCGGGCGCTCGAC
GTGCACCCGCACAACGTGCAGCTATGGGTTCGGTACATCGAGGCGGAGATGAAGTCGCGCAACATCAACCACGCG
CGCAACCTGCTGGACCGGGCCGTGACGACGCTGCCCCGCGTGGACAAGCTGTGGTACAAGTACGTGTACATGGAG
GAGATGCTGGGCAACATCCCGGGCACGAGGCAGGTGTTCGACCGGTGGATGCAGTGGCAGCCGGACGAGGCGGCG
TGGAGCGCGTACATCAAGCTGGAGAAGCGGTACGGCGAGTTCGAGAGGGCGCGCGACATCTTCCGGACCTTCACC
ATGGTCCACCCGGAGCCGCGCAACTGGATCAAGTGGACCAAGTTCGAGGAGGAGCACGGGACGAGCGACGGGGTG
CGCGAGGTGTTCGGGGCCGCGGTCGAGGCGCTCGGCGACGACCTGGTCGACGAACGGCTCTTCATCGCCTACGCG
CGGTTCGAGTCGAAGCTCAAGGAGTACGAGCGGGCGCGGGCCATCTACAAGTACGCGCTGGACCGGCTGCCGCGG
TCGCGGGCGATGCAGCTGCACAAGGCCTACACGACGTTCGAGAAGCAGTTCGGCGACCGGGACGGCGTCGAGGAC
GTGGTGCTGTCGAAGCGGAGGAGGCTGTACGAGGAGCAGGTCAAGGACAACGCCAAGAACTACGACGCCTGGTTC
GACTACGCCGCGCTGGAGGAGTCGTCGGGCGACGCGGACCGGGTGCGGGACGTGTACGAGCGGGCGGTGGCGCAG
GTGCCGCCGACGCAGGAGAAGCGGCACTGGCGGCGCTACATCTACCTCTGGATCTTCTACGCCGTCTGGGAGGAG
CTCGAGGGCCGGGACGCGGAGCGGACGCGGCAGATCTACAGCCTGTGCCTGTCGCTGATACCGCACAAGAAGTTC
ACCTTTGCCAAGATCTGGCTGCTCGCGGCCCAGTTCGAGGTGCGGCAGGGCCAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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