© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2372 |
| Gene name | |
| Location | Contig_1564:3163..5302 |
| Strand | - |
| Gene length (bp) | 2139 |
| Transcript length (bp) | 2139 |
| Coding sequence length (bp) | 2139 |
| Protein length (aa) | 713 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.3855 | 0.8372 | 0.0743 | 0.0484 | 0.07 | 0.0074 | 0.0516 | 0.0209 | 0.0238 | 0.0197 |
| Orthofinder run ID | 4 |
| Orthogroup | 2058 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2372 MTVTRSAGQAATRGTYRCHPSRTSRSRQARLRAAKPILHTESSNSDAEASQPTECSNIDGAPIATEPLFDRRPSP SDTVPKRCITRANAARRMIKAKNIRAGPLWVSKVPRLSGAMTGHDATIPPLAQTRKSSLQPDQHGPAGLVPDWRD PRISFECWADIFHFAASLSTTGDLASGWLVHSATTCRAFAEPALTTLYRCPQIRNPTKAKRLVTLLELSPSDTLY NYRSKVELLHVNIHVVPQAVLFQLIRPLHRLKELIIYTPMDQPPYRELDRTVRWHYSDDIFRALAQSGDHTDAAD DREFATALKSWEWSGRLIGGCVPNIQSIACVHDTPPFSQLTKLSVTNFQVPSLGNLQQPESEEAELRNYHEDCLV VDAVAHAISRLARLDHLVFESSTVLNDRLLHLLPKQLVHLELINCWEVKSEDLAAFLHTHGSNLRILTLLHNQSL NLGFLTTLSQTCPRLGELYMNLSYYRHHDCVDDADPMYEHALLPSQVPTWPSSLRVIRIEHIQHWSVQAAEICLQ SLVDSASVLPNLRHLVIKTRLDIPWQARATLRRKWRATMEKVFQRPWTSPRPYTTLHALPRTKRLVSEPSSPTSL RSRKKAAGHLPEANKSLRRQSQRLSYRDFNTDEDGANLSDGAESLSADSFRRGDEVCKPAIQGLCSTVNLQFDNQ KVRELQYGMGDFVNEDEAESEDEWEGDKDEDESIVSF* |
| Coding | >Hirsu2|2372 ATGACTGTGACTCGCAGCGCTGGGCAAGCGGCCACCCGGGGCACATATCGGTGTCACCCTAGCCGTACGTCTCGC TCCCGGCAAGCCCGTCTGCGCGCGGCGAAACCAATTTTACACACCGAGTCGTCGAACTCGGATGCAGAGGCGTCA CAGCCCACCGAATGTTCTAACATAGACGGAGCCCCTATTGCTACTGAGCCCCTCTTTGACCGGCGCCCTTCGCCC TCTGATACTGTTCCTAAGCGTTGTATAACCCGAGCAAATGCTGCTAGGCGGATGATTAAGGCCAAGAATATACGT GCAGGGCCTCTATGGGTATCCAAAGTACCCCGGTTGAGCGGCGCTATGACCGGGCACGACGCGACCATACCACCA CTAGCCCAAACGCGAAAGTCGTCTCTGCAGCCGGACCAGCATGGGCCAGCAGGCCTAGTTCCAGATTGGAGGGAT CCACGAATCTCCTTTGAGTGTTGGGCGGATATCTTCCATTTCGCTGCGAGCCTCAGCACCACCGGCGATCTCGCC TCCGGCTGGCTTGTACACAGTGCCACAACTTGCCGCGCCTTCGCCGAACCCGCCCTGACAACACTCTACCGATGC CCTCAGATCAGGAATCCCACCAAAGCCAAACGTCTTGTCACATTGCTTGAATTATCACCCTCTGACACTCTCTAC AATTACCGATCCAAGGTTGAACTTTTGCATGTCAACATCCACGTTGTCCCCCAGGCTGTACTGTTTCAACTAATC CGCCCGCTCCATCGCCTCAAAGAGTTGATCATTTACACACCGATGGATCAGCCTCCATACCGGGAGCTAGACAGG ACTGTGCGCTGGCACTACTCTGATGACATATTCCGCGCTCTGGCGCAGTCCGGGGACCACACGGATGCGGCGGAT GACAGGGAGTTTGCAACGGCACTCAAGAGTTGGGAATGGAGCGGGAGGTTGATCGGTGGATGCGTCCCTAACATT CAAAGCATAGCCTGCGTCCACGACACACCGCCATTCTCTCAACTGACGAAGCTTAGTGTTACCAATTTTCAAGTA CCGTCGCTTGGAAACTTGCAACAGCCAGAGAGCGAAGAGGCAGAACTGCGAAATTACCATGAAGACTGTCTCGTG GTTGACGCCGTTGCACACGCCATATCACGCCTGGCTCGTCTCGACCATCTCGTCTTTGAATCCTCAACAGTGTTG AATGATCGTTTGCTTCACCTTCTGCCAAAACAGCTCGTTCACCTAGAACTGATCAACTGCTGGGAGGTCAAGTCG GAGGATCTCGCTGCCTTTCTCCACACGCACGGTAGCAACCTCCGAATACTGACCCTTTTACATAACCAGTCGTTA AACCTGGGATTCCTGACTACCTTGTCCCAGACTTGCCCCCGCCTTGGAGAGTTGTACATGAACCTATCGTACTAC CGTCACCATGACTGCGTCGACGACGCAGACCCCATGTACGAGCATGCCCTGCTTCCGTCTCAAGTGCCGACATGG CCGTCGAGCCTCCGTGTAATCAGGATTGAGCACATCCAACACTGGTCCGTCCAGGCAGCGGAGATTTGTCTGCAG TCTCTTGTCGATAGTGCTAGCGTCCTGCCCAACCTTCGTCATCTGGTGATCAAGACAAGGCTTGATATACCGTGG CAAGCTCGTGCCACCTTACGCCGCAAATGGCGTGCGACGATGGAGAAAGTCTTCCAACGACCGTGGACGAGTCCT AGGCCTTATACGACCCTGCATGCCTTACCGAGGACGAAGAGGCTGGTCAGTGAGCCAAGCAGCCCGACTTCGCTC CGCAGCAGGAAGAAAGCGGCCGGTCATCTGCCAGAGGCAAACAAATCGCTGCGACGCCAGAGTCAGAGACTTTCT TACAGGGATTTCAACACTGACGAGGACGGGGCAAACCTCTCCGACGGAGCCGAGAGCCTCTCTGCCGACTCCTTC CGCCGCGGTGACGAAGTTTGCAAGCCGGCCATCCAGGGACTCTGCAGCACGGTCAATTTGCAATTCGACAACCAA AAGGTTCGGGAGCTGCAGTACGGCATGGGGGACTTCGTGAATGAAGACGAAGCCGAATCGGAGGACGAATGGGAA GGAGATAAGGACGAAGATGAATCAATTGTCTCTTTCTAA |
| Transcript | >Hirsu2|2372 ATGACTGTGACTCGCAGCGCTGGGCAAGCGGCCACCCGGGGCACATATCGGTGTCACCCTAGCCGTACGTCTCGC TCCCGGCAAGCCCGTCTGCGCGCGGCGAAACCAATTTTACACACCGAGTCGTCGAACTCGGATGCAGAGGCGTCA CAGCCCACCGAATGTTCTAACATAGACGGAGCCCCTATTGCTACTGAGCCCCTCTTTGACCGGCGCCCTTCGCCC TCTGATACTGTTCCTAAGCGTTGTATAACCCGAGCAAATGCTGCTAGGCGGATGATTAAGGCCAAGAATATACGT GCAGGGCCTCTATGGGTATCCAAAGTACCCCGGTTGAGCGGCGCTATGACCGGGCACGACGCGACCATACCACCA CTAGCCCAAACGCGAAAGTCGTCTCTGCAGCCGGACCAGCATGGGCCAGCAGGCCTAGTTCCAGATTGGAGGGAT CCACGAATCTCCTTTGAGTGTTGGGCGGATATCTTCCATTTCGCTGCGAGCCTCAGCACCACCGGCGATCTCGCC TCCGGCTGGCTTGTACACAGTGCCACAACTTGCCGCGCCTTCGCCGAACCCGCCCTGACAACACTCTACCGATGC CCTCAGATCAGGAATCCCACCAAAGCCAAACGTCTTGTCACATTGCTTGAATTATCACCCTCTGACACTCTCTAC AATTACCGATCCAAGGTTGAACTTTTGCATGTCAACATCCACGTTGTCCCCCAGGCTGTACTGTTTCAACTAATC CGCCCGCTCCATCGCCTCAAAGAGTTGATCATTTACACACCGATGGATCAGCCTCCATACCGGGAGCTAGACAGG ACTGTGCGCTGGCACTACTCTGATGACATATTCCGCGCTCTGGCGCAGTCCGGGGACCACACGGATGCGGCGGAT GACAGGGAGTTTGCAACGGCACTCAAGAGTTGGGAATGGAGCGGGAGGTTGATCGGTGGATGCGTCCCTAACATT CAAAGCATAGCCTGCGTCCACGACACACCGCCATTCTCTCAACTGACGAAGCTTAGTGTTACCAATTTTCAAGTA CCGTCGCTTGGAAACTTGCAACAGCCAGAGAGCGAAGAGGCAGAACTGCGAAATTACCATGAAGACTGTCTCGTG GTTGACGCCGTTGCACACGCCATATCACGCCTGGCTCGTCTCGACCATCTCGTCTTTGAATCCTCAACAGTGTTG AATGATCGTTTGCTTCACCTTCTGCCAAAACAGCTCGTTCACCTAGAACTGATCAACTGCTGGGAGGTCAAGTCG GAGGATCTCGCTGCCTTTCTCCACACGCACGGTAGCAACCTCCGAATACTGACCCTTTTACATAACCAGTCGTTA AACCTGGGATTCCTGACTACCTTGTCCCAGACTTGCCCCCGCCTTGGAGAGTTGTACATGAACCTATCGTACTAC CGTCACCATGACTGCGTCGACGACGCAGACCCCATGTACGAGCATGCCCTGCTTCCGTCTCAAGTGCCGACATGG CCGTCGAGCCTCCGTGTAATCAGGATTGAGCACATCCAACACTGGTCCGTCCAGGCAGCGGAGATTTGTCTGCAG TCTCTTGTCGATAGTGCTAGCGTCCTGCCCAACCTTCGTCATCTGGTGATCAAGACAAGGCTTGATATACCGTGG CAAGCTCGTGCCACCTTACGCCGCAAATGGCGTGCGACGATGGAGAAAGTCTTCCAACGACCGTGGACGAGTCCT AGGCCTTATACGACCCTGCATGCCTTACCGAGGACGAAGAGGCTGGTCAGTGAGCCAAGCAGCCCGACTTCGCTC CGCAGCAGGAAGAAAGCGGCCGGTCATCTGCCAGAGGCAAACAAATCGCTGCGACGCCAGAGTCAGAGACTTTCT TACAGGGATTTCAACACTGACGAGGACGGGGCAAACCTCTCCGACGGAGCCGAGAGCCTCTCTGCCGACTCCTTC CGCCGCGGTGACGAAGTTTGCAAGCCGGCCATCCAGGGACTCTGCAGCACGGTCAATTTGCAATTCGACAACCAA AAGGTTCGGGAGCTGCAGTACGGCATGGGGGACTTCGTGAATGAAGACGAAGCCGAATCGGAGGACGAATGGGAA GGAGATAAGGACGAAGATGAATCAATTGTCTCTTTCTAA |
| Gene | >Hirsu2|2372 ATGACTGTGACTCGCAGCGCTGGGCAAGCGGCCACCCGGGGCACATATCGGTGTCACCCTAGCCGTACGTCTCGC TCCCGGCAAGCCCGTCTGCGCGCGGCGAAACCAATTTTACACACCGAGTCGTCGAACTCGGATGCAGAGGCGTCA CAGCCCACCGAATGTTCTAACATAGACGGAGCCCCTATTGCTACTGAGCCCCTCTTTGACCGGCGCCCTTCGCCC TCTGATACTGTTCCTAAGCGTTGTATAACCCGAGCAAATGCTGCTAGGCGGATGATTAAGGCCAAGAATATACGT GCAGGGCCTCTATGGGTATCCAAAGTACCCCGGTTGAGCGGCGCTATGACCGGGCACGACGCGACCATACCACCA CTAGCCCAAACGCGAAAGTCGTCTCTGCAGCCGGACCAGCATGGGCCAGCAGGCCTAGTTCCAGATTGGAGGGAT CCACGAATCTCCTTTGAGTGTTGGGCGGATATCTTCCATTTCGCTGCGAGCCTCAGCACCACCGGCGATCTCGCC TCCGGCTGGCTTGTACACAGTGCCACAACTTGCCGCGCCTTCGCCGAACCCGCCCTGACAACACTCTACCGATGC CCTCAGATCAGGAATCCCACCAAAGCCAAACGTCTTGTCACATTGCTTGAATTATCACCCTCTGACACTCTCTAC AATTACCGATCCAAGGTTGAACTTTTGCATGTCAACATCCACGTTGTCCCCCAGGCTGTACTGTTTCAACTAATC CGCCCGCTCCATCGCCTCAAAGAGTTGATCATTTACACACCGATGGATCAGCCTCCATACCGGGAGCTAGACAGG ACTGTGCGCTGGCACTACTCTGATGACATATTCCGCGCTCTGGCGCAGTCCGGGGACCACACGGATGCGGCGGAT GACAGGGAGTTTGCAACGGCACTCAAGAGTTGGGAATGGAGCGGGAGGTTGATCGGTGGATGCGTCCCTAACATT CAAAGCATAGCCTGCGTCCACGACACACCGCCATTCTCTCAACTGACGAAGCTTAGTGTTACCAATTTTCAAGTA CCGTCGCTTGGAAACTTGCAACAGCCAGAGAGCGAAGAGGCAGAACTGCGAAATTACCATGAAGACTGTCTCGTG GTTGACGCCGTTGCACACGCCATATCACGCCTGGCTCGTCTCGACCATCTCGTCTTTGAATCCTCAACAGTGTTG AATGATCGTTTGCTTCACCTTCTGCCAAAACAGCTCGTTCACCTAGAACTGATCAACTGCTGGGAGGTCAAGTCG GAGGATCTCGCTGCCTTTCTCCACACGCACGGTAGCAACCTCCGAATACTGACCCTTTTACATAACCAGTCGTTA AACCTGGGATTCCTGACTACCTTGTCCCAGACTTGCCCCCGCCTTGGAGAGTTGTACATGAACCTATCGTACTAC CGTCACCATGACTGCGTCGACGACGCAGACCCCATGTACGAGCATGCCCTGCTTCCGTCTCAAGTGCCGACATGG CCGTCGAGCCTCCGTGTAATCAGGATTGAGCACATCCAACACTGGTCCGTCCAGGCAGCGGAGATTTGTCTGCAG TCTCTTGTCGATAGTGCTAGCGTCCTGCCCAACCTTCGTCATCTGGTGATCAAGACAAGGCTTGATATACCGTGG CAAGCTCGTGCCACCTTACGCCGCAAATGGCGTGCGACGATGGAGAAAGTCTTCCAACGACCGTGGACGAGTCCT AGGCCTTATACGACCCTGCATGCCTTACCGAGGACGAAGAGGCTGGTCAGTGAGCCAAGCAGCCCGACTTCGCTC CGCAGCAGGAAGAAAGCGGCCGGTCATCTGCCAGAGGCAAACAAATCGCTGCGACGCCAGAGTCAGAGACTTTCT TACAGGGATTTCAACACTGACGAGGACGGGGCAAACCTCTCCGACGGAGCCGAGAGCCTCTCTGCCGACTCCTTC CGCCGCGGTGACGAAGTTTGCAAGCCGGCCATCCAGGGACTCTGCAGCACGGTCAATTTGCAATTCGACAACCAA AAGGTTCGGGAGCTGCAGTACGGCATGGGGGACTTCGTGAATGAAGACGAAGCCGAATCGGAGGACGAATGGGAA GGAGATAAGGACGAAGATGAATCAATTGTCTCTTTCTAA |