Protein ID | Hirsu2|2369 |
Gene name | |
Location | Contig_1562:4304..5409 |
Strand | + |
Gene length (bp) | 1105 |
Transcript length (bp) | 1044 |
Coding sequence length (bp) | 1044 |
Protein length (aa) | 348 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-14 | 1 | 260 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0051179 | localization | No |
GO:0005215 | transporter activity | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Lysosome/Vacuole | Transmembrane domain | 0.2093 | 0.1348 | 0.0737 | 0.4366 | 0.1581 | 0.0152 | 0.4353 | 0.5527 | 0.5168 | 0.0191 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
2 | 45 | 67 | 22 |
3 | 117 | 139 | 22 |
4 | 154 | 176 | 22 |
5 | 197 | 219 | 22 |
6 | 254 | 276 | 22 |
7 | 283 | 305 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 170 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2369 MYSAVADVTADEDRASAFLTLSFGGLVGEFIGPAISSGLMQATSPWLPYLLSFVFLFLAVGMLICLPETLPPTRK EVEEVEPAEDKASHAVKWQLREYASQLKESLEMLKQPGLAKVLVTFLAPVPVLIAMSQVLVQYVSKRFGWSLASA GFLLSVRGTINMLLLLLILPGLSRALLSRAAAKGQHAAAKDRALAQLSAVVLTLGCLVIASGSIAVVVAGLMVST LGSGLAPICRSLAAHLVSSDNTAKLQTLIGIIEAVSSLVAGPALAGLLAAGMSRGGAWTGLPFLGLAAFLCLATL PLFFLAVPGTGQAPAPAPAGPCVRGEGGCRSLGAQCPAHADRGGSTV* |
Coding | >Hirsu2|2369 ATGTATTCCGCCGTGGCCGACGTGACGGCCGACGAGGACAGGGCATCGGCCTTCCTCACTCTCTCGTTCGGTGGT CTGGTGGGCGAATTCATCGGGCCTGCCATCTCTTCGGGCCTCATGCAAGCTACTTCGCCATGGCTCCCGTATCTG CTGAGCTTCGTCTTCCTCTTCCTCGCCGTCGGCATGCTGATCTGCCTCCCTGAGACGCTGCCGCCGACGAGGAAG GAGGTGGAAGAGGTCGAGCCGGCCGAGGACAAGGCGAGCCATGCCGTCAAGTGGCAGCTCCGGGAATACGCGTCC CAGCTCAAGGAGTCGCTGGAGATGCTGAAGCAGCCCGGCCTGGCCAAGGTCCTCGTCACCTTCCTTGCCCCCGTG CCGGTGCTCATAGCGATGAGCCAGGTGTTGGTGCAGTACGTCAGCAAGCGGTTCGGCTGGTCGCTCGCCTCGGCC GGCTTCCTGCTGTCGGTCCGCGGGACGATCAACATGCTGCTGCTGCTCCTCATTCTGCCGGGCCTCTCGCGCGCG CTGCTGTCGCGCGCCGCTGCCAAGGGCCAGCACGCGGCCGCCAAGGACCGCGCCCTCGCCCAGCTCTCGGCCGTC GTCCTGACGCTGGGCTGCCTCGTCATAGCCAGCGGCAGCATCGCCGTCGTCGTCGCCGGCCTGATGGTCAGCACG CTCGGCTCCGGGCTGGCGCCCATCTGCCGCTCCCTGGCCGCCCACCTCGTCAGCAGCGACAACACGGCCAAGCTG CAGACGCTCATCGGCATCATCGAGGCCGTGAGCTCGCTCGTGGCCGGCCCCGCCCTCGCCGGCTTGCTCGCCGCC GGCATGAGCCGCGGCGGCGCCTGGACGGGGCTGCCCTTCCTCGGCCTGGCCGCCTTTCTCTGCCTCGCCACCCTG CCGCTGTTCTTCCTGGCCGTCCCCGGAACGGGCCAGGCGCCGGCGCCGGCCCCCGCCGGCCCCTGTGTGCGCGGC GAAGGCGGCTGCCGCTCCCTCGGTGCGCAGTGCCCGGCGCACGCCGACCGAGGGGGCTCGACCGTTTGA |
Transcript | >Hirsu2|2369 ATGTATTCCGCCGTGGCCGACGTGACGGCCGACGAGGACAGGGCATCGGCCTTCCTCACTCTCTCGTTCGGTGGT CTGGTGGGCGAATTCATCGGGCCTGCCATCTCTTCGGGCCTCATGCAAGCTACTTCGCCATGGCTCCCGTATCTG CTGAGCTTCGTCTTCCTCTTCCTCGCCGTCGGCATGCTGATCTGCCTCCCTGAGACGCTGCCGCCGACGAGGAAG GAGGTGGAAGAGGTCGAGCCGGCCGAGGACAAGGCGAGCCATGCCGTCAAGTGGCAGCTCCGGGAATACGCGTCC CAGCTCAAGGAGTCGCTGGAGATGCTGAAGCAGCCCGGCCTGGCCAAGGTCCTCGTCACCTTCCTTGCCCCCGTG CCGGTGCTCATAGCGATGAGCCAGGTGTTGGTGCAGTACGTCAGCAAGCGGTTCGGCTGGTCGCTCGCCTCGGCC GGCTTCCTGCTGTCGGTCCGCGGGACGATCAACATGCTGCTGCTGCTCCTCATTCTGCCGGGCCTCTCGCGCGCG CTGCTGTCGCGCGCCGCTGCCAAGGGCCAGCACGCGGCCGCCAAGGACCGCGCCCTCGCCCAGCTCTCGGCCGTC GTCCTGACGCTGGGCTGCCTCGTCATAGCCAGCGGCAGCATCGCCGTCGTCGTCGCCGGCCTGATGGTCAGCACG CTCGGCTCCGGGCTGGCGCCCATCTGCCGCTCCCTGGCCGCCCACCTCGTCAGCAGCGACAACACGGCCAAGCTG CAGACGCTCATCGGCATCATCGAGGCCGTGAGCTCGCTCGTGGCCGGCCCCGCCCTCGCCGGCTTGCTCGCCGCC GGCATGAGCCGCGGCGGCGCCTGGACGGGGCTGCCCTTCCTCGGCCTGGCCGCCTTTCTCTGCCTCGCCACCCTG CCGCTGTTCTTCCTGGCCGTCCCCGGAACGGGCCAGGCGCCGGCGCCGGCCCCCGCCGGCCCCTGTGTGCGCGGC GAAGGCGGCTGCCGCTCCCTCGGTGCGCAGTGCCCGGCGCACGCCGACCGAGGGGGCTCGACCGTTTGA |
Gene | >Hirsu2|2369 ATGTATTCCGCCGTGGCCGACGTGACGGCCGACGAGGACAGGTTCGTCAGCGATTGCTCCCCCCGTTGTCGAGCC CGCAGACTAAGCCGACGACTCGTCCAGGGCATCGGCCTTCCTCACTCTCTCGTTCGGTGGTCTGGTGGGCGAATT CATCGGGCCTGCCATCTCTTCGGGCCTCATGCAAGCTACTTCGCCATGGCTCCCGTATCTGCTGAGCTTCGTCTT CCTCTTCCTCGCCGTCGGCATGCTGATCTGCCTCCCTGAGACGCTGCCGCCGACGAGGAAGGAGGTGGAAGAGGT CGAGCCGGCCGAGGACAAGGCGAGCCATGCCGTCAAGTGGCAGCTCCGGGAATACGCGTCCCAGCTCAAGGAGTC GCTGGAGATGCTGAAGCAGCCCGGCCTGGCCAAGGTCCTCGTCACCTTCCTTGCCCCCGTGCCGGTGCTCATAGC GATGAGCCAGGTGTTGGTGCAGTACGTCAGCAAGCGGTTCGGCTGGTCGCTCGCCTCGGCCGGCTTCCTGCTGTC GGTCCGCGGGACGATCAACATGCTGCTGCTGCTCCTCATTCTGCCGGGCCTCTCGCGCGCGCTGCTGTCGCGCGC CGCTGCCAAGGGCCAGCACGCGGCCGCCAAGGACCGCGCCCTCGCCCAGCTCTCGGCCGTCGTCCTGACGCTGGG CTGCCTCGTCATAGCCAGCGGCAGCATCGCCGTCGTCGTCGCCGGCCTGATGGTCAGCACGCTCGGCTCCGGGCT GGCGCCCATCTGCCGCTCCCTGGCCGCCCACCTCGTCAGCAGCGACAACACGGCCAAGCTGCAGACGCTCATCGG CATCATCGAGGCCGTGAGCTCGCTCGTGGCCGGCCCCGCCCTCGCCGGCTTGCTCGCCGCCGGCATGAGCCGCGG CGGCGCCTGGACGGGGCTGCCCTTCCTCGGCCTGGCCGCCTTTCTCTGCCTCGCCACCCTGCCGCTGTTCTTCCT GGCCGTCCCCGGAACGGGCCAGGCGCCGGCGCCGGCCCCCGCCGGCCCCTGTGTGCGCGGCGAAGGCGGCTGCCG CTCCCTCGGTGCGCAGTGCCCGGCGCACGCCGACCGAGGGGGCTCGACCGTTTGA |