Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2364
Gene name
LocationContig_1560:4634..5910
Strand+
Gene length (bp)1276
Transcript length (bp)1182
Coding sequence length (bp)1182
Protein length (aa) 394

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16282 SANT_DAMP1_like SANT/Myb-like domain of DAMP1 5.2E-31 121 219

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4HY90|SWC4_GIBZE SWR1-complex protein 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SWC4 PE=3 SV=2 1 347 1.0E-176
sp|Q870Q1|SWC4_NEUCR SWR1-complex protein 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=crc-1 PE=3 SV=2 1 335 3.0E-148
sp|Q5B4T5|SWC4_EMENI SWR1-complex protein 4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=swc4 PE=3 SV=1 1 371 3.0E-76
sp|Q4WNY4|SWC4_ASPFU SWR1-complex protein 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=swc4 PE=3 SV=1 1 375 8.0E-75
sp|O14308|SWC4_SCHPO SWR1-complex protein 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swc4 PE=3 SV=2 1 330 3.0E-44
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Swissprot ID Swissprot Description Start End E-value
sp|Q4HY90|SWC4_GIBZE SWR1-complex protein 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SWC4 PE=3 SV=2 1 347 1.0E-176
sp|Q870Q1|SWC4_NEUCR SWR1-complex protein 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=crc-1 PE=3 SV=2 1 335 3.0E-148
sp|Q5B4T5|SWC4_EMENI SWR1-complex protein 4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=swc4 PE=3 SV=1 1 371 3.0E-76
sp|Q4WNY4|SWC4_ASPFU SWR1-complex protein 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=swc4 PE=3 SV=1 1 375 8.0E-75
sp|O14308|SWC4_SCHPO SWR1-complex protein 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swc4 PE=3 SV=2 1 330 3.0E-44
sp|Q752S6|SWC4_ASHGO SWR1-complex protein 4 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SWC4 PE=3 SV=1 1 331 6.0E-35
sp|Q4PG15|SWC4_USTMA SWR1-complex protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SWC4 PE=3 SV=1 1 296 5.0E-33
sp|Q6C9M6|SWC4_YARLI SWR1-complex protein 4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SWC4 PE=3 SV=1 2 358 8.0E-33
sp|P53201|SWC4_YEAST SWR1-complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWC4 PE=1 SV=1 1 331 3.0E-31
sp|P0CO96|SWC4_CRYNJ SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=SWC4 PE=3 SV=1 1 331 1.0E-27
sp|Q6CSS3|SWC4_KLULA SWR1-complex protein 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SWC4 PE=3 SV=1 1 331 1.0E-27
sp|P0CO97|SWC4_CRYNB SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=SWC4 PE=3 SV=1 1 331 1.0E-27
sp|Q8VZL6|SWC4_ARATH SWR1-complex protein 4 OS=Arabidopsis thaliana GN=SWC4 PE=1 SV=1 1 370 3.0E-25
sp|Q9NPF5|DMAP1_HUMAN DNA methyltransferase 1-associated protein 1 OS=Homo sapiens GN=DMAP1 PE=1 SV=1 1 292 1.0E-23
sp|Q9JI44|DMAP1_MOUSE DNA methyltransferase 1-associated protein 1 OS=Mus musculus GN=Dmap1 PE=1 SV=1 1 292 2.0E-23
sp|Q6FTV1|SWC4_CANGA SWR1-complex protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWC4 PE=3 SV=1 1 331 2.0E-21
sp|Q5AAJ7|SWC4_CANAL SWR1-complex protein 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWC4 PE=3 SV=1 146 333 9.0E-20
sp|Q5AAJ7|SWC4_CANAL SWR1-complex protein 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWC4 PE=3 SV=1 1 143 3.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.1807 0.9526 0.0306 0.0076 0.0955 0.0021 0.0263 0.0075 0.0113 0.0041

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2052
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5782
Ophiocordyceps australis map64 (Brazil) OphauB2|4997
Ophiocordyceps camponoti-floridani Ophcf2|02191
Ophiocordyceps camponoti-rufipedis Ophun1|1402
Ophiocordyceps kimflemingae Ophio5|2873
Ophiocordyceps subramaniannii Hirsu2|2364 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2364
MATSDVRDVLNLPEGGAGPRASKKQKTSGPKPNLKGLAREVHNLGGDNPIAIVPEVQQFKKRRLAVRKPAARWEM
RSFRNSARPDQSLILQHWRRKETKEGGEDAPHDRAAPATGEMEDSAFAKFNVRVSVPQYSDHQYQQYLQRSDWSK
GETDYLMEIVRDFDLRWPLIWDRYEWNPPATNGEANADGDESKAVVPAVRSRSMEDLKARYYEVAAKMMVAQKPV
QFMSQAEFSLHELMAHFNPQQEKARKDFALNSLSRSRDEAREEESLLIEIKRILARSERLNEERRDLYNRLDYPR
AETDISSFKSSTGLQTLLQNLMSADKSKKRKSIMGTDGVSPGGAAGPGGAAQEAGKRDSLAAGAVAGASIKPGHS
HNNSRRRRSRSRSQSDAS*
Coding >Hirsu2|2364
ATGGCCACCTCGGACGTCCGCGATGTGCTCAACCTCCCGGAGGGCGGCGCCGGACCGCGAGCGTCGAAGAAGCAG
AAGACGTCGGGCCCGAAGCCGAACCTGAAAGGCCTGGCTCGTGAGGTGCACAACCTGGGCGGCGACAACCCCATC
GCGATCGTGCCCGAGGTCCAGCAGTTCAAGAAGCGACGGCTGGCGGTCCGCAAACCGGCAGCACGATGGGAGATG
CGCTCGTTCCGGAACTCGGCTCGACCGGATCAGAGCTTGATACTGCAGCACTGGCGACGGAAGGAGACGAAGGAG
GGGGGCGAGGACGCGCCGCACGATAGGGCCGCGCCGGCGACGGGCGAGATGGAGGACTCGGCGTTTGCCAAGTTC
AACGTCCGCGTGTCCGTGCCGCAATACAGCGACCACCAGTACCAGCAGTATCTGCAGAGGAGCGACTGGTCCAAG
GGGGAGACGGATTACCTGATGGAGATTGTGAGAGACTTTGACCTCCGATGGCCACTCATCTGGGACCGATACGAG
TGGAACCCGCCGGCGACCAACGGCGAGGCGAACGCGGATGGCGACGAGAGCAAGGCGGTCGTGCCGGCCGTGCGG
TCGCGGTCGATGGAGGACCTCAAGGCCCGGTACTACGAAGTGGCGGCCAAGATGATGGTGGCGCAGAAGCCGGTC
CAGTTCATGAGCCAGGCCGAGTTCTCCCTGCACGAGCTGATGGCGCACTTCAACCCGCAGCAGGAAAAGGCGCGC
AAGGACTTTGCCCTCAACTCGCTGTCCCGGTCGCGCGACGAGGCGCGCGAGGAGGAGTCGCTGCTCATCGAGATC
AAGAGGATCCTCGCTAGGAGCGAGCGCCTGAACGAGGAGCGGAGGGACCTGTACAACCGGCTGGACTACCCGCGC
GCCGAGACGGACATCAGCTCCTTCAAGTCGTCGACGGGCCTGCAGACGCTGCTGCAGAACCTGATGAGCGCCGAC
AAGTCCAAGAAGCGCAAGTCCATCATGGGCACCGACGGCGTGAGCCCCGGCGGCGCGGCCGGGCCCGGCGGCGCT
GCTCAGGAGGCCGGTAAACGCGACAGCCTCGCCGCCGGGGCCGTTGCCGGGGCCTCAATCAAGCCGGGCCACAGC
CACAACAACAGCCGCCGCCGCCGCAGCCGCAGCCGCAGCCAGAGCGACGCAAGCTAA
Transcript >Hirsu2|2364
ATGGCCACCTCGGACGTCCGCGATGTGCTCAACCTCCCGGAGGGCGGCGCCGGACCGCGAGCGTCGAAGAAGCAG
AAGACGTCGGGCCCGAAGCCGAACCTGAAAGGCCTGGCTCGTGAGGTGCACAACCTGGGCGGCGACAACCCCATC
GCGATCGTGCCCGAGGTCCAGCAGTTCAAGAAGCGACGGCTGGCGGTCCGCAAACCGGCAGCACGATGGGAGATG
CGCTCGTTCCGGAACTCGGCTCGACCGGATCAGAGCTTGATACTGCAGCACTGGCGACGGAAGGAGACGAAGGAG
GGGGGCGAGGACGCGCCGCACGATAGGGCCGCGCCGGCGACGGGCGAGATGGAGGACTCGGCGTTTGCCAAGTTC
AACGTCCGCGTGTCCGTGCCGCAATACAGCGACCACCAGTACCAGCAGTATCTGCAGAGGAGCGACTGGTCCAAG
GGGGAGACGGATTACCTGATGGAGATTGTGAGAGACTTTGACCTCCGATGGCCACTCATCTGGGACCGATACGAG
TGGAACCCGCCGGCGACCAACGGCGAGGCGAACGCGGATGGCGACGAGAGCAAGGCGGTCGTGCCGGCCGTGCGG
TCGCGGTCGATGGAGGACCTCAAGGCCCGGTACTACGAAGTGGCGGCCAAGATGATGGTGGCGCAGAAGCCGGTC
CAGTTCATGAGCCAGGCCGAGTTCTCCCTGCACGAGCTGATGGCGCACTTCAACCCGCAGCAGGAAAAGGCGCGC
AAGGACTTTGCCCTCAACTCGCTGTCCCGGTCGCGCGACGAGGCGCGCGAGGAGGAGTCGCTGCTCATCGAGATC
AAGAGGATCCTCGCTAGGAGCGAGCGCCTGAACGAGGAGCGGAGGGACCTGTACAACCGGCTGGACTACCCGCGC
GCCGAGACGGACATCAGCTCCTTCAAGTCGTCGACGGGCCTGCAGACGCTGCTGCAGAACCTGATGAGCGCCGAC
AAGTCCAAGAAGCGCAAGTCCATCATGGGCACCGACGGCGTGAGCCCCGGCGGCGCGGCCGGGCCCGGCGGCGCT
GCTCAGGAGGCCGGTAAACGCGACAGCCTCGCCGCCGGGGCCGTTGCCGGGGCCTCAATCAAGCCGGGCCACAGC
CACAACAACAGCCGCCGCCGCCGCAGCCGCAGCCGCAGCCAGAGCGACGCAAGCTAA
Gene >Hirsu2|2364
ATGGCCACCTCGGACGTCCGCGATGTGCTCAACCTCCCGGAGGGCGGCGCCGGACCGCGAGCGTCGAAGAAGCAG
AAGACGTCGGGCCCGAAGCCGAACCTGAAAGGCCTGGCTCGTGAGGTGCACAACCTGGGCGGCGACAACCCCATC
GCGATCGTGCCCGAGGTCCAGCAGTTCAAGAAGCGACGGCTGGCGGTCCGCAAACCGGCAGCACGATGGGAGATG
CGCTCGTTCCGGAACTCGGCTCGACCGGATCAGAGCTTGATACTGCAGCACTGGCGACGGAAGGAGACGAAGGAG
GGGGGCGAGGACGCGCCGCACGATAGGGCCGCGCCGGCGACGGGCGAGATGGAGGACTCGGCGTTTGCCAAGTTC
AACGTCCGCGTGTCCGTGCCGCAATACAGCGACCACCAGTACCAGCAGTATCTGCAGAGGAGCGACTGGTCCAAG
GGGGAGACGGATTACCTGATGGAGATTGTGAGAGACTTTGACCTCCGATGGCCACTCATCTGGGACCGATACGAG
TGGAACCCGCCGGCGACCAACGGCGAGGCGAACGCGGATGGCGACGAGAGCAAGGCGGTCGTGCCGGCCGTGCGG
TCGCGGTCGATGGAGGACCTCAAGGCCCGGTACTACGAAGTGGCGGCCAAGATGATGGTGGCGCAGAAGCCGGTC
CAGTTCATGAGCCAGGCCGAGTTCTCCCTGCACGAGCTGATGGCGCACTTCAACCCGCAGCAGGAAAAGGCGCGC
AAGGACTTTGCCCTCAACTCGCTGTCCCGGTCGCGCGACGAGGCGCGCGAGGAGGAGTCGCTGCTCATCGAGATC
AAGAGGATCCTCGCTAGGAGCGAGCGCCTGAACGAGGAGCGGAGGGACCTGTACAACCGGCTGGACTACCCGCGC
GCCGAGACGGACATCAGCTCCTTCAAGTCGTCGACGGGCCTGCAGACGCTGCTGCAGAACCTGATGAGCGCCGAC
AAGTCCAAGAAGCGCAAGTCCATCATGGGCACCGACGGCGTGAGCCCCGGCGGCGCGGCCGGGCCCGGCGGCGCT
GCTCAGGAGGCCGGTAAACGCGACAGCCTCGCCGCCGGGGCCGTTGCCGGGGCCTCGTCGGGCGGCGGCCATCGG
GACTCGACGGGGGCGGCGGCCGCGACACCGACCGGAGGGAGAAAGAAGGGGCAGGGGCAGCCGCCGGCGCCGCAG
AATCAAGCCGGGCCACAGCCACAACAACAGCCGCCGCCGCCGCAGCCGCAGCCGCAGCCAGAGCGACGCAAGCTA
A

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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