© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2363 |
| Gene name | |
| Location | Contig_1560:3238..4138 |
| Strand | - |
| Gene length (bp) | 900 |
| Transcript length (bp) | 660 |
| Coding sequence length (bp) | 660 |
| Protein length (aa) | 220 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01105 | EMP24_GP25L | emp24/gp25L/p24 family/GOLD | 1.2E-53 | 16 | 213 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q05359|ERP1_YEAST | Protein ERP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP1 PE=1 SV=1 | 1 | 218 | 1.0E-52 |
| sp|O14324|YB79_SCHPO | Uncharacterized membrane protein C16E9.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16E9.09c PE=3 SV=1 | 14 | 218 | 2.0E-51 |
| sp|P53198|ERP6_YEAST | Protein ERP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP6 PE=1 SV=1 | 4 | 218 | 4.0E-48 |
| sp|P38819|ERP5_YEAST | Protein ERP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP5 PE=1 SV=1 | 7 | 218 | 1.0E-46 |
| sp|Q9BVK6|TMED9_HUMAN | Transmembrane emp24 domain-containing protein 9 OS=Homo sapiens GN=TMED9 PE=1 SV=2 | 1 | 219 | 7.0E-40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q05359|ERP1_YEAST | Protein ERP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP1 PE=1 SV=1 | 1 | 218 | 1.0E-52 |
| sp|O14324|YB79_SCHPO | Uncharacterized membrane protein C16E9.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16E9.09c PE=3 SV=1 | 14 | 218 | 2.0E-51 |
| sp|P53198|ERP6_YEAST | Protein ERP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP6 PE=1 SV=1 | 4 | 218 | 4.0E-48 |
| sp|P38819|ERP5_YEAST | Protein ERP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP5 PE=1 SV=1 | 7 | 218 | 1.0E-46 |
| sp|Q9BVK6|TMED9_HUMAN | Transmembrane emp24 domain-containing protein 9 OS=Homo sapiens GN=TMED9 PE=1 SV=2 | 1 | 219 | 7.0E-40 |
| sp|Q8R1V4|TMED4_MOUSE | Transmembrane emp24 domain-containing protein 4 OS=Mus musculus GN=Tmed4 PE=1 SV=1 | 4 | 219 | 1.0E-38 |
| sp|Q7Z7H5|TMED4_HUMAN | Transmembrane emp24 domain-containing protein 4 OS=Homo sapiens GN=TMED4 PE=1 SV=1 | 14 | 219 | 1.0E-37 |
| sp|Q5I0E7|TMED9_RAT | Transmembrane emp24 domain-containing protein 9 OS=Rattus norvegicus GN=Tmed9 PE=1 SV=1 | 16 | 219 | 1.0E-36 |
| sp|Q99KF1|TMED9_MOUSE | Transmembrane emp24 domain-containing protein 9 OS=Mus musculus GN=Tmed9 PE=1 SV=2 | 16 | 219 | 1.0E-36 |
| sp|Q3T133|TMED9_BOVIN | Transmembrane emp24 domain-containing protein 9 OS=Bos taurus GN=TMED9 PE=1 SV=1 | 16 | 219 | 1.0E-36 |
| sp|B3NZM5|TMEDE_DROER | Transmembrane emp24 domain-containing protein eca OS=Drosophila erecta GN=eca PE=3 SV=1 | 7 | 219 | 6.0E-35 |
| sp|B4PVC6|TMEDE_DROYA | Transmembrane emp24 domain-containing protein eca OS=Drosophila yakuba GN=eca PE=3 SV=1 | 7 | 219 | 8.0E-35 |
| sp|B4NKL0|TMEDE_DROWI | Transmembrane emp24 domain-containing protein eca OS=Drosophila willistoni GN=eca PE=3 SV=1 | 7 | 219 | 9.0E-35 |
| sp|B4QWH9|TMEDE_DROSI | Transmembrane emp24 domain-containing protein eca OS=Drosophila simulans GN=eca PE=3 SV=1 | 7 | 219 | 1.0E-34 |
| sp|Q9I7K5|TMEDE_DROME | Transmembrane emp24 domain-containing protein eca OS=Drosophila melanogaster GN=eca PE=2 SV=2 | 7 | 219 | 1.0E-34 |
| sp|B4HJV5|TMEDE_DROSE | Transmembrane emp24 domain-containing protein eca OS=Drosophila sechellia GN=eca PE=3 SV=1 | 7 | 219 | 2.0E-34 |
| sp|B4JG34|TMEDE_DROGR | Transmembrane emp24 domain-containing protein eca OS=Drosophila grimshawi GN=eca PE=3 SV=1 | 7 | 219 | 2.0E-34 |
| sp|B4LYB8|TMEDE_DROVI | Transmembrane emp24 domain-containing protein eca OS=Drosophila virilis GN=eca PE=3 SV=1 | 7 | 219 | 6.0E-34 |
| sp|B3MTS8|TMEDE_DROAN | Transmembrane emp24 domain-containing protein eca OS=Drosophila ananassae GN=eca PE=3 SV=1 | 14 | 219 | 7.0E-34 |
| sp|B4KB41|TMEDE_DROMO | Transmembrane emp24 domain-containing protein eca OS=Drosophila mojavensis GN=eca PE=3 SV=1 | 7 | 219 | 8.0E-34 |
| sp|B4GMC3|TMEDE_DROPE | Transmembrane emp24 domain-containing protein eca OS=Drosophila persimilis GN=eca PE=3 SV=1 | 14 | 219 | 2.0E-33 |
| sp|Q295B2|TMEDE_DROPS | Transmembrane emp24 domain-containing protein eca OS=Drosophila pseudoobscura pseudoobscura GN=eca PE=3 SV=1 | 14 | 219 | 3.0E-33 |
| sp|P27869|TMD11_CANLF | Transmembrane emp24 domain-containing protein 11 OS=Canis lupus familiaris GN=TMED11 PE=1 SV=1 | 5 | 219 | 3.0E-25 |
| sp|Q9D2R4|TMD11_MOUSE | Transmembrane emp24 domain-containing protein 11 OS=Mus musculus GN=Tmed11 PE=1 SV=1 | 11 | 219 | 2.0E-24 |
| sp|Q90515|TMEDA_TAKRU | Transmembrane emp24 domain-containing protein 10 OS=Takifugu rubripes GN=tmed10 PE=3 SV=1 | 4 | 218 | 1.0E-17 |
| sp|Q28735|TMEDA_RABIT | Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus GN=TMED10 PE=1 SV=1 | 16 | 218 | 3.0E-15 |
| sp|O35587|TMEDA_MESAU | Transmembrane protein Tmp21 OS=Mesocricetus auratus GN=TMED10 PE=1 SV=1 | 16 | 218 | 4.0E-15 |
| sp|Q5E971|TMEDA_BOVIN | Transmembrane emp24 domain-containing protein 10 OS=Bos taurus GN=TMED10 PE=2 SV=1 | 16 | 218 | 5.0E-15 |
| sp|P49755|TMEDA_HUMAN | Transmembrane emp24 domain-containing protein 10 OS=Homo sapiens GN=TMED10 PE=1 SV=2 | 16 | 218 | 8.0E-15 |
| sp|Q9D1D4|TMEDA_MOUSE | Transmembrane emp24 domain-containing protein 10 OS=Mus musculus GN=Tmed10 PE=1 SV=1 | 16 | 218 | 2.0E-14 |
| sp|Q5RE32|TMEDA_PONAB | Transmembrane emp24 domain-containing protein 10 OS=Pongo abelii GN=TMED10 PE=2 SV=1 | 16 | 218 | 2.0E-14 |
| sp|B3LVB0|TMEDA_DROAN | Transmembrane emp24 domain-containing protein bai OS=Drosophila ananassae GN=bai PE=3 SV=1 | 2 | 218 | 2.0E-14 |
| sp|Q63584|TMEDA_RAT | Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus GN=Tmed10 PE=1 SV=2 | 16 | 218 | 2.0E-14 |
| sp|Q8RWM6|P24D5_ARATH | Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana GN=At1g21900 PE=1 SV=1 | 27 | 218 | 3.0E-14 |
| sp|Q6IDL4|P24D3_ARATH | Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana GN=At1g09580 PE=1 SV=1 | 4 | 218 | 1.0E-13 |
| sp|B4PUZ3|TMEDA_DROYA | Transmembrane emp24 domain-containing protein bai OS=Drosophila yakuba GN=bai PE=3 SV=1 | 14 | 218 | 7.0E-13 |
| sp|B3P6T8|TMEDA_DROER | Transmembrane emp24 domain-containing protein bai OS=Drosophila erecta GN=bai PE=3 SV=1 | 14 | 218 | 7.0E-13 |
| sp|Q8VY92|P24DA_ARATH | Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana GN=At1g69460 PE=1 SV=1 | 3 | 218 | 8.0E-13 |
| sp|A0AQ71|TMEDA_DROSI | Transmembrane emp24 domain-containing protein bai OS=Drosophila simulans GN=bai PE=3 SV=1 | 14 | 218 | 8.0E-13 |
| sp|B4K4G5|TMEDA_DROMO | Transmembrane emp24 domain-containing protein bai OS=Drosophila mojavensis GN=bai PE=3 SV=1 | 1 | 218 | 9.0E-13 |
| sp|Q8SXY6|TMEDA_DROME | Transmembrane emp24 domain-containing protein bai OS=Drosophila melanogaster GN=bai PE=2 SV=1 | 14 | 218 | 2.0E-12 |
| sp|Q9LQY3|P24D9_ARATH | Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana GN=At1g26690 PE=2 SV=1 | 3 | 218 | 2.0E-12 |
| sp|B4JYU5|TMEDA_DROGR | Transmembrane emp24 domain-containing protein bai OS=Drosophila grimshawi GN=bai PE=3 SV=2 | 1 | 218 | 2.0E-12 |
| sp|Q9FVU0|P24D4_ARATH | Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana GN=CYB PE=1 SV=1 | 7 | 218 | 3.0E-12 |
| sp|B4MGF8|TMEDA_DROVI | Transmembrane emp24 domain-containing protein bai OS=Drosophila virilis GN=bai PE=3 SV=1 | 16 | 218 | 1.0E-11 |
| sp|B4NIY1|TMEDA_DROWI | Transmembrane emp24 domain-containing protein bai OS=Drosophila willistoni GN=bai PE=3 SV=1 | 1 | 218 | 5.0E-11 |
| sp|B4GE47|TMEDA_DROPE | Transmembrane emp24 domain-containing protein bai OS=Drosophila persimilis GN=bai PE=3 SV=1 | 16 | 218 | 5.0E-11 |
| sp|Q769F9|TMEDA_DICDI | Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum GN=empA PE=3 SV=1 | 12 | 213 | 1.0E-09 |
| sp|P0CN72|TMEDA_CRYNJ | Endoplasmic reticulum vesicle protein 25 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ERV25 PE=3 SV=1 | 3 | 218 | 4.0E-09 |
| sp|P0CN73|TMEDA_CRYNB | Endoplasmic reticulum vesicle protein 25 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ERV25 PE=3 SV=1 | 86 | 218 | 2.0E-08 |
| sp|Q9LJV9|P24DB_ARATH | Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana GN=At3g29070 PE=2 SV=1 | 27 | 218 | 4.0E-08 |
| sp|O17528|TMED2_CAEEL | Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans GN=sel-9 PE=1 SV=1 | 3 | 213 | 6.0E-08 |
| sp|F4J4Y0|P24D6_ARATH | Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana GN=At3g10780 PE=1 SV=1 | 16 | 218 | 6.0E-08 |
| sp|P32803|EMP24_YEAST | Endosomal protein P24B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP24 PE=1 SV=1 | 27 | 213 | 7.0E-08 |
| sp|Q8GYG1|P24D7_ARATH | Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana GN=At1g14010 PE=2 SV=1 | 5 | 218 | 1.0E-07 |
| sp|Q9Y3B3|TMED7_HUMAN | Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens GN=TMED7 PE=1 SV=2 | 8 | 219 | 2.0E-07 |
| sp|D3ZTX0|TMED7_RAT | Transmembrane emp24 domain-containing protein 7 OS=Rattus norvegicus GN=Tmed7 PE=1 SV=1 | 9 | 219 | 4.0E-07 |
| sp|O13946|TMEDA_SCHPO | Endoplasmic reticulum vesicle protein 25 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erv25 PE=3 SV=1 | 7 | 218 | 7.0E-07 |
| sp|Q5B5L5|TMEDA_EMENI | Endoplasmic reticulum vesicle protein 25 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=erv25 PE=3 SV=1 | 1 | 218 | 3.0E-06 |
| sp|Q4P958|TMEDA_USTMA | Endoplasmic reticulum vesicle protein 25 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ERV25 PE=3 SV=1 | 87 | 218 | 4.0E-06 |
| sp|Q54BN0|TMEDB_DICDI | Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum GN=empB PE=3 SV=1 | 86 | 213 | 5.0E-06 |
| sp|O81045|P24D8_ARATH | Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana GN=At2g03290 PE=1 SV=1 | 16 | 218 | 6.0E-06 |
| sp|Q9R0Q3|TMED2_MOUSE | Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1 | 21 | 213 | 7.0E-06 |
| sp|P49020|TMED2_CRIGR | Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1 | 21 | 213 | 8.0E-06 |
| sp|Q63524|TMED2_RAT | Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1 | 21 | 213 | 8.0E-06 |
| sp|Q15363|TMED2_HUMAN | Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1 | 21 | 213 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2363 MRTFLPLLPLLSLARALHFYVDGSAPKCFFEELPKDTLVVGHYSAEEYDEHANSWQQHGGISIYISVDEVFDNDH RVVSQRGSSSGRFTFTSQEAGDHKICFTPSSSSGRSGWLSARSVNGGIKMYLDMVIGATNQLESSDKTKLEDIAT RAQDLNARLKDIRREQVFQREREAEFRDQSESTNSRVIRWIVIQLAVIGITCAWQLSHLRSFFIKQKLT* |
| Coding | >Hirsu2|2363 ATGAGGACCTTCCTGCCTCTCCTCCCCCTCCTCTCCCTCGCGCGGGCTCTGCACTTCTACGTCGACGGCTCGGCT CCAAAATGCTTCTTCGAGGAGCTCCCCAAGGACACGCTCGTCGTCGGGCACTACTCGGCCGAGGAGTATGACGAG CATGCCAACAGCTGGCAGCAGCACGGCGGCATCAGCATATACATCTCCGTCGACGAGGTATTCGATAACGACCAT CGCGTCGTATCCCAGCGCGGCTCCTCGTCCGGCCGCTTCACCTTCACCTCCCAGGAAGCCGGCGACCACAAGATC TGCTTCACGCCCTCGTCCAGCTCCGGGCGCTCGGGCTGGCTCTCGGCGCGCTCCGTCAATGGCGGCATCAAGATG TATCTCGACATGGTCATCGGCGCCACCAACCAGCTCGAGAGCAGCGACAAGACCAAGCTCGAGGATATCGCCACC CGCGCCCAGGACCTCAACGCCAGGCTCAAGGACATTCGCAGGGAGCAGGTCTTCCAGAGAGAACGCGAGGCCGAG TTCAGAGACCAGTCCGAGTCGACCAACAGCCGCGTCATCCGCTGGATCGTCATCCAGCTCGCCGTCATCGGCATC ACCTGCGCCTGGCAGCTCTCCCACTTGCGCTCCTTTTTCATCAAGCAGAAGCTCACTTGA |
| Transcript | >Hirsu2|2363 ATGAGGACCTTCCTGCCTCTCCTCCCCCTCCTCTCCCTCGCGCGGGCTCTGCACTTCTACGTCGACGGCTCGGCT CCAAAATGCTTCTTCGAGGAGCTCCCCAAGGACACGCTCGTCGTCGGGCACTACTCGGCCGAGGAGTATGACGAG CATGCCAACAGCTGGCAGCAGCACGGCGGCATCAGCATATACATCTCCGTCGACGAGGTATTCGATAACGACCAT CGCGTCGTATCCCAGCGCGGCTCCTCGTCCGGCCGCTTCACCTTCACCTCCCAGGAAGCCGGCGACCACAAGATC TGCTTCACGCCCTCGTCCAGCTCCGGGCGCTCGGGCTGGCTCTCGGCGCGCTCCGTCAATGGCGGCATCAAGATG TATCTCGACATGGTCATCGGCGCCACCAACCAGCTCGAGAGCAGCGACAAGACCAAGCTCGAGGATATCGCCACC CGCGCCCAGGACCTCAACGCCAGGCTCAAGGACATTCGCAGGGAGCAGGTCTTCCAGAGAGAACGCGAGGCCGAG TTCAGAGACCAGTCCGAGTCGACCAACAGCCGCGTCATCCGCTGGATCGTCATCCAGCTCGCCGTCATCGGCATC ACCTGCGCCTGGCAGCTCTCCCACTTGCGCTCCTTTTTCATCAAGCAGAAGCTCACTTGA |
| Gene | >Hirsu2|2363 ATGAGGACCTTCCTGCCTCTCCTCCCCCTCCTCTCCCTCGCGCGGGCTCTGCACTTCTACGTCGACGGCTCGGCT CCAAAATGCTTCTTCGAGGAGCTCCCCAAGGACACGCTCGTCGTCGGGCACTACTCGGCCGAGGAGTATGACGAG CATGCCAACAGCTGGCAGCAGCACGGCGGCATCAGCATATACATCTCCGTCGACGTACGTTCCCCCCTTCCGTCT CCCCAATTCTCCCTTTCTGCCCTCGCGGCCAAGCTGGGTTTCCCCCAAGGGGGAGCCGCGCGCCGGCAATTGATT CCCGTCGGCTGCAACTGGATTGCTGACTTTGTTTGGGGGTAATCCTCACGATGCAGGAGGTATTCGATAACGACC ATCGCGTCGTATCCCAGCGCGGCTCCTCGTCCGGCCGCTTCACCTTCACCTCCCAGGAAGCCGGCGACCACAAGA TCTGCTTCACGCCCTCGTCCAGCTCCGGGCGCTCGGGCTGGCTCTCGGCGCGCTCCGTCAATGGCGGCATCAAGA TGTATCTCGACATGGTCATCGGCGCCACCAACCAGCTCGAGAGCAGCGACAAGACCAAGCTCGAGGATATCGCCA CCCGCGCCCAGGACCTCAACGCCAGGCTCAAGGACATTCGCAGGGAGCAGGTCTTCCAGAGAGTGAGAAATCCCC CCCTCACCCCCTCTTTCGCCGGCGCATCACCCTGCCACGGCCCGCTTTCCGAGGCTAATCCGGTGGCCCTGCCAG GAACGCGAGGCCGAGTTCAGAGACCAGTCCGAGTCGACCAACAGCCGCGTCATCCGCTGGATCGTCATCCAGCTC GCCGTCATCGGCATCACCTGCGCCTGGCAGCTCTCCCACTTGCGCTCCTTTTTCATCAAGCAGAAGCTCACTTGA |