Protein ID | Hirsu2|2357 |
Gene name | |
Location | Contig_156:18821..20008 |
Strand | - |
Gene length (bp) | 1187 |
Transcript length (bp) | 909 |
Coding sequence length (bp) | 909 |
Protein length (aa) | 303 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17144 | Ribosomal_L5e | Ribosomal large subunit proteins 60S L5, and 50S L18 | 4.6E-79 | 14 | 179 |
PF14204 | Ribosomal_L18_c | Ribosomal L18 C-terminal region | 1.1E-13 | 239 | 299 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O59953|RL5_NEUCR | 60S ribosomal protein L5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-5 PE=3 SV=1 | 1 | 301 | 0.0E+00 |
sp|P52822|RL5A_SCHPO | 60S ribosomal protein L5-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl501 PE=1 SV=2 | 1 | 295 | 5.0E-129 |
sp|O74306|RL5B_SCHPO | 60S ribosomal protein L5-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl502 PE=2 SV=1 | 1 | 295 | 3.0E-128 |
sp|P26321|RL5_YEAST | 60S ribosomal protein L5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL5 PE=1 SV=4 | 1 | 287 | 2.0E-127 |
sp|Q9W5R8|RL5_DROME | 60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2 | 1 | 296 | 4.0E-109 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O59953|RL5_NEUCR | 60S ribosomal protein L5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-5 PE=3 SV=1 | 1 | 301 | 0.0E+00 |
sp|P52822|RL5A_SCHPO | 60S ribosomal protein L5-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl501 PE=1 SV=2 | 1 | 295 | 5.0E-129 |
sp|O74306|RL5B_SCHPO | 60S ribosomal protein L5-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl502 PE=2 SV=1 | 1 | 295 | 3.0E-128 |
sp|P26321|RL5_YEAST | 60S ribosomal protein L5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL5 PE=1 SV=4 | 1 | 287 | 2.0E-127 |
sp|Q9W5R8|RL5_DROME | 60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2 | 1 | 296 | 4.0E-109 |
sp|O65353|RL5_HELAN | 60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1 | 1 | 292 | 7.0E-109 |
sp|Q26481|RL5_STYCL | 60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3 | 1 | 302 | 5.0E-108 |
sp|Q56FG6|RL5_LYSTE | 60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1 | 1 | 301 | 3.0E-106 |
sp|Q4KTI3|RL5_SUBDO | 60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1 | 1 | 294 | 4.0E-106 |
sp|Q5XUC7|RL5_TOXCI | 60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1 | 1 | 301 | 7.0E-106 |
sp|P22451|RL5_CHICK | 60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2 | 1 | 254 | 5.0E-104 |
sp|Q4UDE7|RL5_THEAN | 60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1 | 1 | 301 | 7.0E-104 |
sp|Q4N655|RL5_THEPA | 60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1 | 1 | 301 | 7.0E-104 |
sp|P15125|RL5A_XENLA | 60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-a PE=2 SV=2 | 1 | 254 | 2.0E-103 |
sp|P15126|RL5B_XENLA | 60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-b PE=2 SV=2 | 1 | 254 | 4.0E-103 |
sp|Q8LBI1|RL51_ARATH | 60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2 | 1 | 298 | 2.0E-102 |
sp|Q6UNT2|RL5_CUCSA | 60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1 | 1 | 298 | 2.0E-102 |
sp|A2WXX3|RL51_ORYSI | 60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=3 SV=2 | 3 | 298 | 7.0E-102 |
sp|P49227|RL52_ARATH | 60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3 | 1 | 298 | 1.0E-101 |
sp|Q0JGY1|RL51_ORYSJ | 60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1 | 3 | 298 | 4.0E-101 |
sp|O22608|RL5_DUNSA | 60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1 | 1 | 255 | 5.0E-101 |
sp|Q627R7|RL5_CAEBR | 60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2 | 1 | 294 | 5.0E-100 |
sp|Q1HQU2|RL5_AEDAE | 60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1 | 1 | 254 | 6.0E-98 |
sp|Q8L4L4|RL52_ORYSJ | 60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1 | 3 | 298 | 4.0E-97 |
sp|P49405|RL5_CAEEL | 60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=3 SV=1 | 1 | 253 | 5.0E-96 |
sp|P46777|RL5_HUMAN | 60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3 | 1 | 254 | 2.0E-95 |
sp|Q58DW5|RL5_BOVIN | 60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3 | 1 | 254 | 2.0E-95 |
sp|Q5EY89|RL5_EIMTE | 60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1 | 1 | 286 | 2.0E-95 |
sp|O76190|RL5_BOMMO | 60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1 | 1 | 294 | 9.0E-95 |
sp|Q4R5M0|RL5_MACFA | 60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3 | 1 | 254 | 1.0E-94 |
sp|O44248|RL5_ANOGA | 60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3 | 1 | 250 | 2.0E-93 |
sp|P47962|RL5_MOUSE | 60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3 | 1 | 254 | 4.0E-92 |
sp|Q54XX3|RL5_DICDI | 60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1 | 1 | 289 | 5.0E-92 |
sp|P09895|RL5_RAT | 60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3 | 1 | 254 | 2.0E-91 |
sp|Q6JWW5|RL5_OIKDI | 60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1 | 3 | 258 | 5.0E-91 |
sp|Q231U7|RL5_TETTS | 60S ribosomal protein L5 OS=Tetrahymena thermophila (strain SB210) GN=RPL5 PE=1 SV=2 | 1 | 301 | 3.0E-83 |
sp|Q95276|RL5_PIG | 60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3 | 1 | 121 | 2.0E-43 |
sp|Q8ZVV7|RL18_PYRAE | 50S ribosomal protein L18 OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rpl18 PE=3 SV=1 | 11 | 252 | 1.0E-30 |
sp|A4WMD6|RL18_PYRAR | 50S ribosomal protein L18 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl18 PE=3 SV=1 | 11 | 252 | 4.0E-30 |
sp|O26130|RL18_METTH | 50S ribosomal protein L18 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=rpl18 PE=3 SV=1 | 11 | 253 | 5.0E-30 |
sp|A7I5Q8|RL18_METB6 | 50S ribosomal protein L18 OS=Methanoregula boonei (strain 6A8) GN=rpl18 PE=3 SV=1 | 15 | 216 | 1.0E-29 |
sp|A8M9I3|RL18_CALMQ | 50S ribosomal protein L18 OS=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) GN=rpl18 PE=3 SV=1 | 11 | 252 | 2.0E-29 |
sp|A6UWV7|RL18_META3 | 50S ribosomal protein L18 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl18 PE=3 SV=1 | 11 | 250 | 7.0E-29 |
sp|A3CT16|RL18_METMJ | 50S ribosomal protein L18 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl18 PE=3 SV=1 | 15 | 217 | 3.0E-28 |
sp|Q2FSH0|RL18_METHJ | 50S ribosomal protein L18 OS=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) GN=rpl18 PE=3 SV=1 | 15 | 210 | 5.0E-28 |
sp|P54044|RL18_METJA | 50S ribosomal protein L18 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rpl18 PE=3 SV=1 | 16 | 245 | 1.0E-27 |
sp|A3MSJ3|RL18_PYRCJ | 50S ribosomal protein L18 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl18 PE=3 SV=1 | 14 | 252 | 2.0E-27 |
sp|B8GKF2|RL18_METPE | 50S ribosomal protein L18 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl18 PE=3 SV=1 | 15 | 230 | 2.0E-27 |
sp|A1RVN4|RL18_PYRIL | 50S ribosomal protein L18 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) GN=rpl18 PE=3 SV=1 | 14 | 252 | 4.0E-27 |
sp|Q9YF94|RL18_AERPE | 50S ribosomal protein L18 OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl18 PE=3 SV=1 | 25 | 252 | 5.0E-27 |
sp|B1Y8V2|RL18_PYRNV | 50S ribosomal protein L18 OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl18 PE=3 SV=1 | 14 | 252 | 2.0E-26 |
sp|A5UL69|RL18_METS3 | 50S ribosomal protein L18 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl18 PE=3 SV=1 | 14 | 252 | 3.0E-26 |
sp|A1RWR7|RL18_THEPD | 50S ribosomal protein L18 OS=Thermofilum pendens (strain Hrk 5) GN=rpl18 PE=3 SV=1 | 14 | 252 | 2.0E-25 |
sp|A2SPM1|RL18_METLZ | 50S ribosomal protein L18 OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl18 PE=3 SV=1 | 11 | 215 | 4.0E-25 |
sp|Q0W1W9|RL18_METAR | 50S ribosomal protein L18 OS=Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50) GN=rpl18 PE=3 SV=1 | 15 | 187 | 3.0E-24 |
sp|A3DNC6|RL18_STAMF | 50S ribosomal protein L18 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) GN=rpl18 PE=3 SV=1 | 14 | 253 | 2.0E-23 |
sp|O28373|RL18_ARCFU | 50S ribosomal protein L18 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=rpl18 PE=3 SV=1 | 14 | 184 | 2.0E-23 |
sp|Q975J9|RL18_SULTO | 50S ribosomal protein L18 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=rpl18 PE=3 SV=1 | 11 | 252 | 4.0E-23 |
sp|A6UQ63|RL18_METVS | 50S ribosomal protein L18 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl18 PE=3 SV=1 | 11 | 245 | 8.0E-23 |
sp|P50562|RL18_HALSA | 50S ribosomal protein L18 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=rpl18 PE=1 SV=3 | 15 | 253 | 8.0E-23 |
sp|B0R675|RL18_HALS3 | 50S ribosomal protein L18 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl18 PE=3 SV=1 | 15 | 253 | 8.0E-23 |
sp|P14033|RL18_METVA | 50S ribosomal protein L18 OS=Methanococcus vannielii GN=rpl18 PE=3 SV=1 | 11 | 245 | 8.0E-23 |
sp|C6A179|RL18_THESM | 50S ribosomal protein L18 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl18 PE=3 SV=1 | 25 | 252 | 2.0E-22 |
sp|B1L785|RL18_KORCO | 50S ribosomal protein L18 OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl18 PE=3 SV=1 | 14 | 230 | 3.0E-22 |
sp|A4FWA2|RL18_METM5 | 50S ribosomal protein L18 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl18 PE=3 SV=1 | 11 | 250 | 4.0E-22 |
sp|P93779|RL5_SOLME | 60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1 | 189 | 298 | 4.0E-22 |
sp|A6VH04|RL18_METM7 | 50S ribosomal protein L18 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl18 PE=3 SV=1 | 11 | 250 | 5.0E-22 |
sp|A9A9P5|RL18_METM6 | 50S ribosomal protein L18 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl18 PE=3 SV=1 | 11 | 250 | 5.0E-22 |
sp|A0B9V1|RL18_METTP | 50S ribosomal protein L18 OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=rpl18 PE=3 SV=1 | 25 | 201 | 1.0E-21 |
sp|Q12ZT2|RL18_METBU | 50S ribosomal protein L18 OS=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) GN=rpl18 PE=3 SV=1 | 15 | 212 | 2.0E-21 |
sp|Q8TZA5|RL18_METKA | 50S ribosomal protein L18 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl18 PE=3 SV=1 | 25 | 253 | 2.0E-21 |
sp|Q2NFX6|RL18_METST | 50S ribosomal protein L18 OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=rpl18 PE=3 SV=1 | 16 | 252 | 1.0E-20 |
sp|Q9V1V4|RL18_PYRAB | 50S ribosomal protein L18 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=rpl18 PE=3 SV=1 | 25 | 252 | 1.0E-20 |
sp|A2BMD8|RL18_HYPBU | 50S ribosomal protein L18 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) GN=rpl18 PE=3 SV=1 | 11 | 253 | 1.0E-20 |
sp|A4YCY5|RL18_METS5 | 50S ribosomal protein L18 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl18 PE=3 SV=1 | 11 | 252 | 1.0E-20 |
sp|Q6LXD4|RL18_METMP | 50S ribosomal protein L18 OS=Methanococcus maripaludis (strain S2 / LL) GN=rpl18 PE=3 SV=1 | 11 | 250 | 1.0E-20 |
sp|P50563|RL18_HALVD | 50S ribosomal protein L18 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=rpl18 PE=1 SV=2 | 15 | 253 | 1.0E-20 |
sp|B6YSN3|RL18_THEON | 50S ribosomal protein L18 OS=Thermococcus onnurineus (strain NA1) GN=rpl18 PE=3 SV=1 | 25 | 252 | 1.0E-20 |
sp|O59438|RL18_PYRHO | 50S ribosomal protein L18 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rpl18 PE=3 SV=2 | 25 | 252 | 2.0E-20 |
sp|Q9HH80|RL18_PYRFU | 50S ribosomal protein L18 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl18 PE=1 SV=1 | 25 | 252 | 5.0E-20 |
sp|P14123|RL18_HALMA | 50S ribosomal protein L18 OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl18 PE=1 SV=3 | 15 | 226 | 1.0E-19 |
sp|P50561|RL18_HALMT | 50S ribosomal protein L18 OS=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) GN=rpl18 PE=1 SV=2 | 15 | 226 | 3.0E-19 |
sp|Q3IMW9|RL18_NATPD | 50S ribosomal protein L18 OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=rpl18 PE=3 SV=1 | 11 | 216 | 5.0E-19 |
sp|B8D5V1|RL18_DESK1 | 50S ribosomal protein L18 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl18 PE=3 SV=1 | 15 | 252 | 5.0E-19 |
sp|Q9UX88|RL18_SULSO | 50S ribosomal protein L18 OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rpl18 PE=3 SV=1 | 16 | 253 | 6.0E-19 |
sp|O05640|RL18_SULAC | 50S ribosomal protein L18 OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rpl18 PE=3 SV=1 | 16 | 256 | 7.0E-19 |
sp|Q74MJ4|RL18_NANEQ | 50S ribosomal protein L18 OS=Nanoarchaeum equitans (strain Kin4-M) GN=rpl18 PE=3 SV=1 | 25 | 250 | 1.0E-18 |
sp|C3NH90|RL18_SULIN | 50S ribosomal protein L18 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl18 PE=3 SV=1 | 16 | 251 | 3.0E-18 |
sp|Q8PV31|RL18_METMA | 50S ribosomal protein L18 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=rpl18 PE=3 SV=2 | 15 | 220 | 3.0E-18 |
sp|Q46GB4|RL18_METBF | 50S ribosomal protein L18 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl18 PE=3 SV=1 | 15 | 220 | 4.0E-18 |
sp|Q8TRS8|RL18_METAC | 50S ribosomal protein L18 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl18 PE=3 SV=1 | 15 | 220 | 6.0E-18 |
sp|C3NEG2|RL18_SULIY | 50S ribosomal protein L18 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl18 PE=3 SV=1 | 16 | 251 | 7.0E-18 |
sp|C3MVJ7|RL18_SULIM | 50S ribosomal protein L18 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl18 PE=3 SV=1 | 16 | 251 | 7.0E-18 |
sp|C3MQ78|RL18_SULIL | 50S ribosomal protein L18 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl18 PE=3 SV=1 | 16 | 251 | 7.0E-18 |
sp|C4KHH5|RL18_SULIK | 50S ribosomal protein L18 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl18 PE=3 SV=1 | 16 | 251 | 7.0E-18 |
sp|C3N5U6|RL18_SULIA | 50S ribosomal protein L18 OS=Sulfolobus islandicus (strain M.16.27) GN=rpl18 PE=3 SV=1 | 16 | 251 | 7.0E-18 |
sp|A8AC01|RL18_IGNH4 | 50S ribosomal protein L18 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl18 PE=3 SV=1 | 14 | 253 | 1.0E-17 |
sp|Q18GG8|RL18_HALWD | 50S ribosomal protein L18 OS=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) GN=rpl18 PE=3 SV=1 | 15 | 226 | 2.0E-17 |
sp|C5A266|RL18_THEGJ | 50S ribosomal protein L18 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl18 PE=3 SV=1 | 52 | 252 | 1.0E-16 |
sp|Q5JJG7|RL18_THEKO | 50S ribosomal protein L18 OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=rpl18 PE=3 SV=1 | 52 | 252 | 2.0E-16 |
sp|B9LSQ8|RL18_HALLT | 50S ribosomal protein L18 OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl18 PE=3 SV=1 | 15 | 226 | 7.0E-16 |
sp|P19949|RL5_RABIT | 60S ribosomal protein L5 (Fragments) OS=Oryctolagus cuniculus GN=RPL5 PE=1 SV=2 | 3 | 47 | 2.0E-14 |
sp|Q97BV7|RL18_THEVO | 50S ribosomal protein L18 OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=rpl18 PE=3 SV=1 | 20 | 184 | 7.0E-13 |
sp|Q9HIS6|RL18_THEAC | 50S ribosomal protein L18 OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=rpl18 PE=3 SV=1 | 20 | 184 | 1.0E-09 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006412 | translation | Yes |
GO:0008097 | 5S rRNA binding | Yes |
GO:0005840 | ribosome | Yes |
GO:0003735 | structural constituent of ribosome | Yes |
GO:0044260 | cellular macromolecule metabolic process | No |
GO:0008152 | metabolic process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043229 | intracellular organelle | No |
GO:0003676 | nucleic acid binding | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0009059 | macromolecule biosynthetic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0044271 | cellular nitrogen compound biosynthetic process | No |
GO:0005488 | binding | No |
GO:0019538 | protein metabolic process | No |
GO:0043226 | organelle | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0009058 | biosynthetic process | No |
GO:0043228 | non-membrane-bounded organelle | No |
GO:0008150 | biological_process | No |
GO:0034645 | cellular macromolecule biosynthetic process | No |
GO:0043232 | intracellular non-membrane-bounded organelle | No |
GO:1901566 | organonitrogen compound biosynthetic process | No |
GO:0043604 | amide biosynthetic process | No |
GO:0006518 | peptide metabolic process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0005575 | cellular_component | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0009987 | cellular process | No |
GO:0044238 | primary metabolic process | No |
GO:0019843 | rRNA binding | No |
GO:0043603 | cellular amide metabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0005198 | structural molecule activity | No |
GO:0003723 | RNA binding | No |
GO:0043043 | peptide biosynthetic process | No |
GO:0097159 | organic cyclic compound binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal | 0.7403 | 0.6126 | 0.0244 | 0.0468 | 0.3093 | 0.0385 | 0.0587 | 0.0178 | 0.0245 | 0.0026 |
Orthofinder run ID | 4 |
Orthogroup | 2047 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2357 MPFHKLVKNSAYYSRYQTKYKRRRQGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNKDIVMQIVTSEITGDKVL VAAYAHELKAYGIKHGLTNWAAAYATGLLIARRVLSKLGLDKDFVGVEEPDGEFSLTEAAETDDGERRPFKAFLD VGLARTSTGARVFGAMKGASDGGILVPHSEKRFPGYDMETKELDAEVLRKYIYGGHVAEYMETLADDDEERYHSQ FQKYIDDDLEADGLEDLYTEAHQAIREDPWKKASSDAPKKSKEEWKAISKKHKLTKTSKAEKQKKIQEKIQKILQ EE* |
Coding | >Hirsu2|2357 ATGCCTTTCCACAAGCTGGTGAAGAACAGCGCGTACTACAGCCGCTACCAGACCAAGTACAAGCGCAGACGCCAA GGCAAGACCGACTACTACGCCCGCAAGCGCCTCATCACCCAGGCCAAGAACAAGTACAATGCGCCCAAGTACCGC CTGGTGGTGCGATTCACCAACAAGGACATCGTGATGCAAATCGTCACGTCGGAGATCACGGGCGACAAGGTCCTC GTCGCGGCCTACGCCCACGAGCTCAAGGCCTACGGCATCAAGCACGGCCTGACCAACTGGGCCGCCGCCTACGCC ACCGGTCTCCTGATCGCGCGTCGTGTTCTCAGCAAGCTCGGCCTCGACAAGGACTTTGTCGGTGTCGAGGAGCCC GATGGTGAATTTAGCCTGACGGAGGCGGCCGAGACGGACGACGGCGAGCGCCGCCCCTTCAAGGCCTTCCTCGAC GTCGGCCTTGCGCGCACCTCGACCGGTGCCCGTGTCTTTGGCGCCATGAAGGGTGCCTCTGACGGCGGCATCTTG GTGCCGCACTCGGAGAAGCGATTCCCCGGCTACGACATGGAGACCAAGGAGCTCGACGCCGAGGTTCTCCGCAAG TACATCTACGGCGGCCACGTGGCTGAGTACATGGAGACGCTCGCCGACGACGACGAGGAGCGCTACCACAGCCAG TTCCAGAAGTACATCGACGACGACCTCGAGGCCGACGGCCTGGAGGACCTGTACACCGAGGCCCACCAGGCCATC CGCGAGGATCCGTGGAAGAAGGCGTCGAGCGACGCGCCCAAGAAGAGCAAGGAGGAGTGGAAGGCCATTTCCAAG AAGCACAAGCTGACCAAGACGAGCAAGGCCGAGAAGCAGAAGAAGATCCAGGAGAAGATCCAGAAGATCCTGCAA GAGGAGTAA |
Transcript | >Hirsu2|2357 ATGCCTTTCCACAAGCTGGTGAAGAACAGCGCGTACTACAGCCGCTACCAGACCAAGTACAAGCGCAGACGCCAA GGCAAGACCGACTACTACGCCCGCAAGCGCCTCATCACCCAGGCCAAGAACAAGTACAATGCGCCCAAGTACCGC CTGGTGGTGCGATTCACCAACAAGGACATCGTGATGCAAATCGTCACGTCGGAGATCACGGGCGACAAGGTCCTC GTCGCGGCCTACGCCCACGAGCTCAAGGCCTACGGCATCAAGCACGGCCTGACCAACTGGGCCGCCGCCTACGCC ACCGGTCTCCTGATCGCGCGTCGTGTTCTCAGCAAGCTCGGCCTCGACAAGGACTTTGTCGGTGTCGAGGAGCCC GATGGTGAATTTAGCCTGACGGAGGCGGCCGAGACGGACGACGGCGAGCGCCGCCCCTTCAAGGCCTTCCTCGAC GTCGGCCTTGCGCGCACCTCGACCGGTGCCCGTGTCTTTGGCGCCATGAAGGGTGCCTCTGACGGCGGCATCTTG GTGCCGCACTCGGAGAAGCGATTCCCCGGCTACGACATGGAGACCAAGGAGCTCGACGCCGAGGTTCTCCGCAAG TACATCTACGGCGGCCACGTGGCTGAGTACATGGAGACGCTCGCCGACGACGACGAGGAGCGCTACCACAGCCAG TTCCAGAAGTACATCGACGACGACCTCGAGGCCGACGGCCTGGAGGACCTGTACACCGAGGCCCACCAGGCCATC CGCGAGGATCCGTGGAAGAAGGCGTCGAGCGACGCGCCCAAGAAGAGCAAGGAGGAGTGGAAGGCCATTTCCAAG AAGCACAAGCTGACCAAGACGAGCAAGGCCGAGAAGCAGAAGAAGATCCAGGAGAAGATCCAGAAGATCCTGCAA GAGGAGTAA |
Gene | >Hirsu2|2357 ATGGTAAGTCGAGGCCTACTGGAACCGCTGCCTCAAGAGGCGAGCGAGGCTACCAAGGAAGAAATTCCAATTGCT CGTCCTGGAGAGTCACCGCAAGATGCTTCGGAGCAAAGACGAGCAAGTCTGAAGCGCAAATTGCTGACTCGGGGA TTCGACAATAGCCTTTCCACAAGCTGGTGAAGAACAGCGCGTACTACAGGTGAGTTTTTTTTCTTCTCCCCTTCT CCTGTCGATTCCTCCAGGCGTAGCGACGACAGACATCAGTATTTGTCGCTTTCCCGTCATAGGGATGGACCGACT GACCAGAGGTTCGCCGCAGCCGCTACCAGACCAAGTACAAGCGCAGACGCCAAGGCAAGACCGACTACTACGCCC GCAAGCGCCTCATCACCCAGGCCAAGAACAAGTACAATGCGCCCAAGTACCGCCTGGTGGTGCGATTCACCAACA AGGACATCGTGATGCAAATCGTCACGTCGGAGATCACGGGCGACAAGGTCCTCGTCGCGGCCTACGCCCACGAGC TCAAGGCCTACGGCATCAAGCACGGCCTGACCAACTGGGCCGCCGCCTACGCCACCGGTCTCCTGATCGCGCGTC GTGTTCTCAGCAAGCTCGGCCTCGACAAGGACTTTGTCGGTGTCGAGGAGCCCGATGGTGAATTTAGCCTGACGG AGGCGGCCGAGACGGACGACGGCGAGCGCCGCCCCTTCAAGGCCTTCCTCGACGTCGGCCTTGCGCGCACCTCGA CCGGTGCCCGTGTCTTTGGCGCCATGAAGGGTGCCTCTGACGGCGGCATCTTGGTGCCGCACTCGGAGAAGCGAT TCCCCGGCTACGACATGGAGACCAAGGAGCTCGACGCCGAGGTTCTCCGCAAGTACATCTACGGCGGCCACGTGG CTGAGTACATGGAGACGCTCGCCGACGACGACGAGGAGCGCTACCACAGCCAGTTCCAGAAGTACATCGACGACG ACCTCGAGGCCGACGGCCTGGAGGACCTGTACACCGAGGCCCACCAGGCCATCCGCGAGGATCCGTGGAAGAAGG CGTCGAGCGACGCGCCCAAGAAGAGCAAGGAGGAGTGGAAGGCCATTTCCAAGAAGCACAAGCTGACCAAGACGA GCAAGGCCGAGAAGCAGAAGAAGATCCAGGAGAAGATCCAGAAGATCCTGCAAGAGGAGTAA |