Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2356
Gene name
LocationContig_156:17096..17951
Strand-
Gene length (bp)855
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide|Transmembrane domain 0.3459 0.1329 0.1596 0.5342 0.2201 0.0312 0.577 0.5373 0.5565 0.0574

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 215 237 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2046
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5897
Ophiocordyceps australis map64 (Brazil) OphauB2|1054
Ophiocordyceps camponoti-floridani Ophcf2|03476
Ophiocordyceps camponoti-rufipedis Ophun1|893
Ophiocordyceps subramaniannii Hirsu2|2356 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4756

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2356
MATRAGGADGGPDLPADQGQCINLRCRQCGGRDSHIRLDFAIADAKRLVVNGVELYPTAEAEHGLWMTAPVKDEA
AGAAAAPREQPLGYGLAVALRASDEAEGVDLVDVDYSIREVDGRPVPGLPTVRVGLIQLVAGDGPLLIGSVATRD
NLHISCGAVQCWAYRLAGVAYGVESDEALRRCCGLGAAPPNDTVPAAARPALDWHRAAGIDGVAGFQPWLLGFMA
VAVLVSFIMFCVRSRRRRGIRGLCESKAGVGLGSH*
Coding >Hirsu2|2356
ATGGCGACGCGTGCGGGCGGCGCGGACGGCGGCCCGGACCTACCGGCGGACCAGGGCCAGTGCATCAACCTCCGG
TGCCGGCAGTGCGGCGGCCGCGACAGCCACATCCGGCTCGACTTCGCCATCGCGGACGCAAAGCGGCTGGTCGTC
AACGGGGTCGAGCTGTACCCGACGGCCGAGGCCGAGCACGGGCTGTGGATGACGGCGCCGGTCAAGGACGAGGCG
GCCGGGGCGGCGGCGGCGCCGCGCGAGCAGCCGCTCGGGTACGGCCTCGCGGTCGCGCTGCGGGCCTCGGACGAG
GCCGAGGGCGTCGACCTCGTCGACGTCGACTACTCCATCCGCGAGGTCGACGGCCGCCCCGTCCCCGGCCTGCCG
ACCGTCCGCGTCGGCCTCATCCAGCTCGTCGCCGGCGACGGCCCGCTGCTCATCGGCAGCGTCGCCACCCGCGAC
AACCTCCACATCAGCTGCGGCGCCGTCCAGTGCTGGGCCTACCGCCTCGCCGGCGTGGCCTACGGCGTCGAGAGC
GACGAGGCCCTGCGCCGCTGCTGCGGCCTGGGCGCCGCGCCGCCCAACGACACCGTCCCTGCTGCTGCGCGCCCG
GCCCTCGACTGGCATCGCGCGGCCGGGATCGACGGCGTCGCGGGCTTCCAGCCTTGGCTGCTCGGCTTCATGGCT
GTTGCTGTGCTCGTGTCCTTCATCATGTTCTGCGTCAGGAGCAGGCGCAGACGCGGGATCCGTGGCCTGTGCGAG
AGCAAGGCGGGCGTCGGCCTGGGGTCGCATTAG
Transcript >Hirsu2|2356
ATGGCGACGCGTGCGGGCGGCGCGGACGGCGGCCCGGACCTACCGGCGGACCAGGGCCAGTGCATCAACCTCCGG
TGCCGGCAGTGCGGCGGCCGCGACAGCCACATCCGGCTCGACTTCGCCATCGCGGACGCAAAGCGGCTGGTCGTC
AACGGGGTCGAGCTGTACCCGACGGCCGAGGCCGAGCACGGGCTGTGGATGACGGCGCCGGTCAAGGACGAGGCG
GCCGGGGCGGCGGCGGCGCCGCGCGAGCAGCCGCTCGGGTACGGCCTCGCGGTCGCGCTGCGGGCCTCGGACGAG
GCCGAGGGCGTCGACCTCGTCGACGTCGACTACTCCATCCGCGAGGTCGACGGCCGCCCCGTCCCCGGCCTGCCG
ACCGTCCGCGTCGGCCTCATCCAGCTCGTCGCCGGCGACGGCCCGCTGCTCATCGGCAGCGTCGCCACCCGCGAC
AACCTCCACATCAGCTGCGGCGCCGTCCAGTGCTGGGCCTACCGCCTCGCCGGCGTGGCCTACGGCGTCGAGAGC
GACGAGGCCCTGCGCCGCTGCTGCGGCCTGGGCGCCGCGCCGCCCAACGACACCGTCCCTGCTGCTGCGCGCCCG
GCCCTCGACTGGCATCGCGCGGCCGGGATCGACGGCGTCGCGGGCTTCCAGCCTTGGCTGCTCGGCTTCATGGCT
GTTGCTGTGCTCGTGTCCTTCATCATGTTCTGCGTCAGGAGCAGGCGCAGACGCGGGATCCGTGGCCTGTGCGAG
AGCAAGGCGGGCGTCGGCCTGGGGTCGCATTAG
Gene >Hirsu2|2356
ATGGCGACGCGTGCGGGCGGCGCGGACGGCGGCCCGGACCTACCGGCGGACCAGGGCCAGTGCATCAACCTCCGG
TGCCGGCAGTGCGGCGGCCGCGACAGCCACATCCGGCTCGACTTCGCCATCGCGGACGCAAAGCGGCTGGTCGTC
AACGGGGTCGAGCTGTACCCGACGGCCGAGGCCGAGCACGGGCTGTGGATGACGGCGCCGGTCAAGGACGAGGCG
GCCGGGGCGGCGGCGGCGCCGCGCGAGCAGCCGCTCGGGTACGGCCTCGCGGTCGCGCTGCGGGCCTCGGACGAG
GCCGAGGGCGTCGACCTCGTCGACGTCGACTACTCCATCCGCGAGGTCGACGGCCGCCCCGTCCCCGGCCTGCCG
ACCGTCCGCGTCGGCCTCATCCAGCTCGTCGCCGGCGACGGCCCGCTGCTCATCGGCAGCGTCGCCACCCGCGAC
AACCTCCACATCAGCTGCGGCGCCGTCCAGTGCTGGGCCTACCGCCTCGCCGGCGTGGCCTACGGCGTCGAGAGC
GACGAGGCCCTGCGCCGCTGCTGCGGCCTGGGCGCCGCGCCGCCCAACGACACCGTCCCTGCTGCTGCGCGCCCG
GCCCTCGACTGGCATCGCGCGGCCGGGATCGACGGCGTCGCGGGCTTCCAGCCTTGGCTGCTCGGCTTCATGGCT
GTTGCTGTGCTCGTGTCGTGCGTTTCCTCCCCTCCCCTTCGCGTTGGACTGCGGACTGGCGTTCTTTGGCTGATC
TTGGCGGCTTTCAGCTTCATCATGTTCTGCGTCAGGAGCAGGCGCAGACGCGGGATCCGTGGCCTGTGCGAGAGC
AAGGCGGGCGTCGGCCTGGGGTCGCATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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