© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2356 |
| Gene name | |
| Location | Contig_156:17096..17951 |
| Strand | - |
| Gene length (bp) | 855 |
| Transcript length (bp) | 783 |
| Coding sequence length (bp) | 783 |
| Protein length (aa) | 261 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Signal peptide|Transmembrane domain | 0.3459 | 0.1329 | 0.1596 | 0.5342 | 0.2201 | 0.0312 | 0.577 | 0.5373 | 0.5565 | 0.0574 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 215 | 237 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 2046 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2356 MATRAGGADGGPDLPADQGQCINLRCRQCGGRDSHIRLDFAIADAKRLVVNGVELYPTAEAEHGLWMTAPVKDEA AGAAAAPREQPLGYGLAVALRASDEAEGVDLVDVDYSIREVDGRPVPGLPTVRVGLIQLVAGDGPLLIGSVATRD NLHISCGAVQCWAYRLAGVAYGVESDEALRRCCGLGAAPPNDTVPAAARPALDWHRAAGIDGVAGFQPWLLGFMA VAVLVSFIMFCVRSRRRRGIRGLCESKAGVGLGSH* |
| Coding | >Hirsu2|2356 ATGGCGACGCGTGCGGGCGGCGCGGACGGCGGCCCGGACCTACCGGCGGACCAGGGCCAGTGCATCAACCTCCGG TGCCGGCAGTGCGGCGGCCGCGACAGCCACATCCGGCTCGACTTCGCCATCGCGGACGCAAAGCGGCTGGTCGTC AACGGGGTCGAGCTGTACCCGACGGCCGAGGCCGAGCACGGGCTGTGGATGACGGCGCCGGTCAAGGACGAGGCG GCCGGGGCGGCGGCGGCGCCGCGCGAGCAGCCGCTCGGGTACGGCCTCGCGGTCGCGCTGCGGGCCTCGGACGAG GCCGAGGGCGTCGACCTCGTCGACGTCGACTACTCCATCCGCGAGGTCGACGGCCGCCCCGTCCCCGGCCTGCCG ACCGTCCGCGTCGGCCTCATCCAGCTCGTCGCCGGCGACGGCCCGCTGCTCATCGGCAGCGTCGCCACCCGCGAC AACCTCCACATCAGCTGCGGCGCCGTCCAGTGCTGGGCCTACCGCCTCGCCGGCGTGGCCTACGGCGTCGAGAGC GACGAGGCCCTGCGCCGCTGCTGCGGCCTGGGCGCCGCGCCGCCCAACGACACCGTCCCTGCTGCTGCGCGCCCG GCCCTCGACTGGCATCGCGCGGCCGGGATCGACGGCGTCGCGGGCTTCCAGCCTTGGCTGCTCGGCTTCATGGCT GTTGCTGTGCTCGTGTCCTTCATCATGTTCTGCGTCAGGAGCAGGCGCAGACGCGGGATCCGTGGCCTGTGCGAG AGCAAGGCGGGCGTCGGCCTGGGGTCGCATTAG |
| Transcript | >Hirsu2|2356 ATGGCGACGCGTGCGGGCGGCGCGGACGGCGGCCCGGACCTACCGGCGGACCAGGGCCAGTGCATCAACCTCCGG TGCCGGCAGTGCGGCGGCCGCGACAGCCACATCCGGCTCGACTTCGCCATCGCGGACGCAAAGCGGCTGGTCGTC AACGGGGTCGAGCTGTACCCGACGGCCGAGGCCGAGCACGGGCTGTGGATGACGGCGCCGGTCAAGGACGAGGCG GCCGGGGCGGCGGCGGCGCCGCGCGAGCAGCCGCTCGGGTACGGCCTCGCGGTCGCGCTGCGGGCCTCGGACGAG GCCGAGGGCGTCGACCTCGTCGACGTCGACTACTCCATCCGCGAGGTCGACGGCCGCCCCGTCCCCGGCCTGCCG ACCGTCCGCGTCGGCCTCATCCAGCTCGTCGCCGGCGACGGCCCGCTGCTCATCGGCAGCGTCGCCACCCGCGAC AACCTCCACATCAGCTGCGGCGCCGTCCAGTGCTGGGCCTACCGCCTCGCCGGCGTGGCCTACGGCGTCGAGAGC GACGAGGCCCTGCGCCGCTGCTGCGGCCTGGGCGCCGCGCCGCCCAACGACACCGTCCCTGCTGCTGCGCGCCCG GCCCTCGACTGGCATCGCGCGGCCGGGATCGACGGCGTCGCGGGCTTCCAGCCTTGGCTGCTCGGCTTCATGGCT GTTGCTGTGCTCGTGTCCTTCATCATGTTCTGCGTCAGGAGCAGGCGCAGACGCGGGATCCGTGGCCTGTGCGAG AGCAAGGCGGGCGTCGGCCTGGGGTCGCATTAG |
| Gene | >Hirsu2|2356 ATGGCGACGCGTGCGGGCGGCGCGGACGGCGGCCCGGACCTACCGGCGGACCAGGGCCAGTGCATCAACCTCCGG TGCCGGCAGTGCGGCGGCCGCGACAGCCACATCCGGCTCGACTTCGCCATCGCGGACGCAAAGCGGCTGGTCGTC AACGGGGTCGAGCTGTACCCGACGGCCGAGGCCGAGCACGGGCTGTGGATGACGGCGCCGGTCAAGGACGAGGCG GCCGGGGCGGCGGCGGCGCCGCGCGAGCAGCCGCTCGGGTACGGCCTCGCGGTCGCGCTGCGGGCCTCGGACGAG GCCGAGGGCGTCGACCTCGTCGACGTCGACTACTCCATCCGCGAGGTCGACGGCCGCCCCGTCCCCGGCCTGCCG ACCGTCCGCGTCGGCCTCATCCAGCTCGTCGCCGGCGACGGCCCGCTGCTCATCGGCAGCGTCGCCACCCGCGAC AACCTCCACATCAGCTGCGGCGCCGTCCAGTGCTGGGCCTACCGCCTCGCCGGCGTGGCCTACGGCGTCGAGAGC GACGAGGCCCTGCGCCGCTGCTGCGGCCTGGGCGCCGCGCCGCCCAACGACACCGTCCCTGCTGCTGCGCGCCCG GCCCTCGACTGGCATCGCGCGGCCGGGATCGACGGCGTCGCGGGCTTCCAGCCTTGGCTGCTCGGCTTCATGGCT GTTGCTGTGCTCGTGTCGTGCGTTTCCTCCCCTCCCCTTCGCGTTGGACTGCGGACTGGCGTTCTTTGGCTGATC TTGGCGGCTTTCAGCTTCATCATGTTCTGCGTCAGGAGCAGGCGCAGACGCGGGATCCGTGGCCTGTGCGAGAGC AAGGCGGGCGTCGGCCTGGGGTCGCATTAG |