Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2343
Gene name
LocationContig_1556:204..795
Strand-
Gene length (bp)591
Transcript length (bp)294
Coding sequence length (bp)294
Protein length (aa) 98

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00300 His_Phos_1 Histidine phosphatase superfamily (branch 1) 4.7E-13 5 74

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q09676|YA03_SCHPO Probable phosphatase SPAC5H10.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5H10.03 PE=3 SV=1 5 80 2.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2343
MPPQLVLIRHAQAQHNVDRDYSIPDPALTDLGREQCAALRASLRQRFGDAAAADVAVVVSPMRRTLQTAELALDW
LAERGVVFEASADWQGSTCPHR*
Coding >Hirsu2|2343
ATGCCTCCGCAGCTGGTCCTGATCCGCCACGCCCAGGCCCAGCACAACGTTGACAGGGACTACTCCATCCCCGAC
CCGGCCCTGACCGACCTCGGCCGCGAGCAGTGCGCCGCCCTGCGCGCCAGCCTCCGCCAGCGCTTCGGCGACGCG
GCGGCGGCCGACGTCGCCGTCGTTGTCAGCCCCATGCGCCGCACGCTGCAGACGGCCGAGCTGGCCCTCGACTGG
CTCGCTGAGCGCGGCGTCGTCTTCGAGGCCAGCGCCGACTGGCAAGGGAGCACATGTCCCCATCGGTAG
Transcript >Hirsu2|2343
ATGCCTCCGCAGCTGGTCCTGATCCGCCACGCCCAGGCCCAGCACAACGTTGACAGGGACTACTCCATCCCCGAC
CCGGCCCTGACCGACCTCGGCCGCGAGCAGTGCGCCGCCCTGCGCGCCAGCCTCCGCCAGCGCTTCGGCGACGCG
GCGGCGGCCGACGTCGCCGTCGTTGTCAGCCCCATGCGCCGCACGCTGCAGACGGCCGAGCTGGCCCTCGACTGG
CTCGCTGAGCGCGGCGTCGTCTTCGAGGCCAGCGCCGACTGGCAAGGGAGCACATGTCCCCATCGGTAG
Gene >Hirsu2|2343
ATGCCTCCGCAGCTGGTCCTGATCCGCCACGCCCAGGCCCAGCACAACGTTGACAATACGTCTCCCCTCCACTAA
GACCATCGTCAGCTTCGTATCTCTGACTCGGGCCGCAGCCGGAGAGCACGGGACTACTCCATCCCCGACCCGGCC
CTGACCGACCTCGGCCGCGAGCAGTGCGCCGCCCTGCGCGCCAGCCTCCGCCAGCGCTTCGGCGACGCGGCGGCG
GCCGACGTCGCCGTCGTTGTCAGCCCCATGCGCCGCACGCTGCAGACGGCCGAGCTGGCCCTCGACTGGCTCGCT
GAGCGCGGCGTCGTCTTCGAGGCCAGCGCCGACTGGCAAGGTAACGTCTCTCCCCCTCTCTCCCATCTTTACACC
CTCCTTTTCTTTACTTCTTTCTTCCTTTTTTCTCCCTTTTTTGGGTGGTGGAAGTCCTCCGTCCTCCCCCGGTCC
GTCCGCGTCATGCCGGCGCCGATCCCGGTCGCGGGGTCCCTCCGTCCTCCGGGCCGGCGCACCAGCTCCGGCTCG
CCCCCAAACCACAAACCTCTTTCCCCGTCGCGACCAAACACAGGGAGCACATGTCCCCATCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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