Protein ID | Hirsu2|2340 |
Gene name | |
Location | Contig_1555:46..375 |
Strand | + |
Gene length (bp) | 329 |
Transcript length (bp) | 219 |
Coding sequence length (bp) | 219 |
Protein length (aa) | 73 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.5994 | 0.3028 | 0.1879 | 0.2251 | 0.1371 | 0.0219 | 0.1727 | 0.4805 | 0.2536 | 0.0083 |
Orthofinder run ID | 4 |
Orthogroup | 2043 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2340 LPRGAPAGDWAEAVNDKALDETRAHMNMFEPTENPGYETLTNDAAARIERWFQNDWYAASDDPDPQPVEEVS* |
Coding | >Hirsu2|2340 CTGCCGCGCGGCGCCCCGGCCGGCGACTGGGCCGAGGCCGTCAACGACAAGGCCCTGGACGAGACGCGCGCCCAC ATGAACATGTTCGAGCCGACGGAGAACCCCGGCTACGAGACGCTCACCAACGACGCCGCCGCCCGCATCGAGCGC TGGTTCCAGAACGACTGGTACGCAGCCAGCGACGACCCCGACCCGCAGCCGGTCGAGGAGGTGTCGTGA |
Transcript | >Hirsu2|2340 CTGCCGCGCGGCGCCCCGGCCGGCGACTGGGCCGAGGCCGTCAACGACAAGGCCCTGGACGAGACGCGCGCCCAC ATGAACATGTTCGAGCCGACGGAGAACCCCGGCTACGAGACGCTCACCAACGACGCCGCCGCCCGCATCGAGCGC TGGTTCCAGAACGACTGGTACGCAGCCAGCGACGACCCCGACCCGCAGCCGGTCGAGGAGGTGTCGTGA |
Gene | >Hirsu2|2340 CTGCCGCGCGGCGCCCCGGCCGGCGACTGGGCCGAGGCCGTCAACGACAAGGCCCTGGACGAGACGCGCGCCCAC ATGAGTACGTCACACACAGACACACACACACACACACACACACACACATATATAACCCTATCTATATAACTGGAG GAAAGCTGGCTGACCGACCGCGGGGCCGGCGACAAAAAGACATGTTCGAGCCGACGGAGAACCCCGGCTACGAGA CGCTCACCAACGACGCCGCCGCCCGCATCGAGCGCTGGTTCCAGAACGACTGGTACGCAGCCAGCGACGACCCCG ACCCGCAGCCGGTCGAGGAGGTGTCGTGA |