Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2335
Gene name
LocationContig_1552:2186..3845
Strand-
Gene length (bp)1659
Transcript length (bp)1206
Coding sequence length (bp)1206
Protein length (aa) 402

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05653 Mg_trans_NIPA Magnesium transporter NIPA 1.2E-102 4 293

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 1 306 2.0E-95
sp|Q9LNK7|NIPA3_ARATH Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 1 300 6.0E-94
sp|F4JKQ7|NIPA5_ARATH Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana GN=At4g09640 PE=2 SV=1 1 299 8.0E-88
sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1 1 299 4.0E-87
sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana GN=At2g21120 PE=2 SV=1 1 310 8.0E-86
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Swissprot ID Swissprot Description Start End E-value
sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 1 306 2.0E-95
sp|Q9LNK7|NIPA3_ARATH Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 1 300 6.0E-94
sp|F4JKQ7|NIPA5_ARATH Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana GN=At4g09640 PE=2 SV=1 1 299 8.0E-88
sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1 1 299 4.0E-87
sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana GN=At2g21120 PE=2 SV=1 1 310 8.0E-86
sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1 4 290 2.0E-85
sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1 4 290 2.0E-85
sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1 4 290 8.0E-85
sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1 4 290 1.0E-84
sp|B3LFA3|NIPA2_ARATH Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana GN=At4g13800 PE=2 SV=1 1 314 1.0E-82
sp|Q9LIR9|NIPA1_ARATH Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana GN=At3g23870 PE=2 SV=1 43 313 6.0E-80
sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1 6 290 2.0E-73
sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3 6 290 8.0E-71
sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2 2 290 4.0E-62
sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1 2 306 2.0E-57
sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1 2 290 2.0E-56
sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1 7 301 7.0E-56
sp|Q8BHK1|NIPA1_MOUSE Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1 7 301 1.0E-55
sp|Q9H841|NPAL2_HUMAN NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1 8 293 1.0E-27
sp|Q6P499|NPAL3_HUMAN NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1 3 296 4.0E-25
sp|Q5RD30|NPAL3_PONAB NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1 3 293 4.0E-24
sp|Q91WC7|NPAL2_MOUSE NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1 8 293 1.0E-23
sp|Q8BGN5|NPAL3_MOUSE NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1 3 342 6.0E-22
sp|Q8RWF4|NIPA8_ARATH Probable magnesium transporter NIPA8 OS=Arabidopsis thaliana GN=At3g26670 PE=2 SV=1 14 300 2.0E-10
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GO

GO Term Description Terminal node
GO:0015693 magnesium ion transport Yes
GO:0016021 integral component of membrane Yes
GO:0015095 magnesium ion transmembrane transporter activity Yes
GO:0008324 cation transmembrane transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0046873 metal ion transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0051234 establishment of localization No
GO:0072511 divalent inorganic cation transport No
GO:0006812 cation transport No
GO:0070838 divalent metal ion transport No
GO:0051179 localization No
GO:0044425 membrane part No
GO:0031224 intrinsic component of membrane No
GO:0006811 ion transport No
GO:0006810 transport No
GO:0022857 transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0030001 metal ion transport No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 75 97 22
3 104 123 19
4 138 160 22
5 173 195 22
6 210 229 19
7 242 264 22
8 269 291 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2335
MIEDKYIGLALAMSSALAIGTSFVITKKGLMQAERRHGFEGDGFVYLRSPLWWAGIATLGIGEICNFAAYAFAPA
ILVTPLGALSVLIGAVLGSYFLEEELGTLGKLGSAICLIGAVVIVLHAPPDEQIETIDQILHYAIQPGFLLYAIA
VVAFAVFMIYKIAPVYGKKNALIYLSICSTVGSISVMSVKAFGIALKLTLAGNNQFSHPSTYVFMILTTVCILTQ
MNYFNKALASFPTNIVNPLYYVTFTTATLCASFILFSGFNTTDPVNTLSLLCGFLVTFTGVYLLNLSRGDPNGNN
LTAGRRGLDATPTDMVSSLQTRRSMQARRSGDPGRHSISSLHGDREGLIRAYDEEEAAGFGLTDLAGESDEDSRG
AHNRLNGKTELNTNDIELEDRKSAER*
Coding >Hirsu2|2335
ATGATCGAGGACAAATACATCGGCCTGGCGCTGGCCATGTCCTCAGCTTTGGCCATCGGCACCAGCTTCGTCATT
ACCAAAAAGGGCTTGATGCAAGCCGAACGGCGGCACGGGTTTGAGGGCGATGGTTTCGTATACCTTAGGAGTCCA
CTGTGGTGGGCAGGAATCGCTACGCTCGGCATCGGCGAGATCTGCAACTTCGCCGCCTACGCATTCGCGCCCGCC
ATTCTCGTCACCCCTCTCGGAGCCCTCAGCGTTCTGATAGGCGCGGTGCTGGGGTCATATTTCCTGGAGGAAGAA
CTGGGGACACTCGGGAAGCTGGGGAGCGCCATTTGCCTCATTGGCGCTGTTGTCATCGTCCTACACGCCCCCCCC
GACGAGCAAATCGAGACCATTGACCAAATATTACACTACGCCATCCAACCAGGGTTTTTGCTTTACGCCATTGCC
GTCGTCGCTTTTGCCGTCTTCATGATCTACAAGATTGCTCCTGTCTACGGCAAAAAGAACGCGCTCATTTACCTC
TCGATCTGCTCGACCGTCGGCTCTATCTCCGTCATGTCTGTCAAAGCTTTCGGCATTGCGCTGAAACTGACTCTC
GCCGGCAACAATCAGTTTTCGCACCCCTCGACCTACGTCTTCATGATCCTGACCACTGTCTGTATCCTGACGCAG
ATGAATTACTTCAACAAAGCCCTGGCCTCTTTTCCGACAAACATCGTAAATCCCCTATACTACGTGACCTTCACC
ACAGCCACCCTTTGCGCCTCCTTCATACTGTTCAGCGGCTTCAACACCACCGACCCCGTCAACACCCTTTCGCTA
CTTTGCGGCTTCCTTGTGACATTTACCGGTGTCTACTTGCTCAATCTTTCCAGAGGCGACCCGAACGGAAATAAC
CTCACCGCAGGGCGGAGAGGTCTGGACGCTACGCCCACCGACATGGTATCCAGCCTGCAGACTCGCCGCAGTATG
CAAGCACGCAGGAGCGGCGATCCTGGGCGACACAGCATCAGCAGCCTTCATGGCGACAGGGAAGGGTTGATCCGG
GCCTACGATGAGGAGGAGGCCGCCGGTTTCGGCCTCACGGACCTCGCGGGGGAGAGTGACGAGGATTCCCGCGGA
GCACACAACCGTCTCAACGGCAAGACGGAACTTAACACCAACGATATCGAGCTGGAAGATCGAAAGTCCGCTGAG
AGATAG
Transcript >Hirsu2|2335
ATGATCGAGGACAAATACATCGGCCTGGCGCTGGCCATGTCCTCAGCTTTGGCCATCGGCACCAGCTTCGTCATT
ACCAAAAAGGGCTTGATGCAAGCCGAACGGCGGCACGGGTTTGAGGGCGATGGTTTCGTATACCTTAGGAGTCCA
CTGTGGTGGGCAGGAATCGCTACGCTCGGCATCGGCGAGATCTGCAACTTCGCCGCCTACGCATTCGCGCCCGCC
ATTCTCGTCACCCCTCTCGGAGCCCTCAGCGTTCTGATAGGCGCGGTGCTGGGGTCATATTTCCTGGAGGAAGAA
CTGGGGACACTCGGGAAGCTGGGGAGCGCCATTTGCCTCATTGGCGCTGTTGTCATCGTCCTACACGCCCCCCCC
GACGAGCAAATCGAGACCATTGACCAAATATTACACTACGCCATCCAACCAGGGTTTTTGCTTTACGCCATTGCC
GTCGTCGCTTTTGCCGTCTTCATGATCTACAAGATTGCTCCTGTCTACGGCAAAAAGAACGCGCTCATTTACCTC
TCGATCTGCTCGACCGTCGGCTCTATCTCCGTCATGTCTGTCAAAGCTTTCGGCATTGCGCTGAAACTGACTCTC
GCCGGCAACAATCAGTTTTCGCACCCCTCGACCTACGTCTTCATGATCCTGACCACTGTCTGTATCCTGACGCAG
ATGAATTACTTCAACAAAGCCCTGGCCTCTTTTCCGACAAACATCGTAAATCCCCTATACTACGTGACCTTCACC
ACAGCCACCCTTTGCGCCTCCTTCATACTGTTCAGCGGCTTCAACACCACCGACCCCGTCAACACCCTTTCGCTA
CTTTGCGGCTTCCTTGTGACATTTACCGGTGTCTACTTGCTCAATCTTTCCAGAGGCGACCCGAACGGAAATAAC
CTCACCGCAGGGCGGAGAGGTCTGGACGCTACGCCCACCGACATGGTATCCAGCCTGCAGACTCGCCGCAGTATG
CAAGCACGCAGGAGCGGCGATCCTGGGCGACACAGCATCAGCAGCCTTCATGGCGACAGGGAAGGGTTGATCCGG
GCCTACGATGAGGAGGAGGCCGCCGGTTTCGGCCTCACGGACCTCGCGGGGGAGAGTGACGAGGATTCCCGCGGA
GCACACAACCGTCTCAACGGCAAGACGGAACTTAACACCAACGATATCGAGCTGGAAGATCGAAAGTCCGCTGAG
AGATAG
Gene >Hirsu2|2335
ATGATCGAGGACAAGTACGTTGCGCTTCCACCTGTTCTCGGATCCCGACTTCGTCCCATCCCGACTTCGTTACTG
AATTTGCTGACGACGTGTGCGCTTTGCAGATACATCGGCCTGGCGCTGGCCATGTCCTCAGCTTTGGCCATCGGT
ACGTTGTTTCCGCGCTGCCTTGGGTTTGTCGCTTCCTCATACCCTTCTGACAGAATGTTTCCAGGCACCAGCTTC
GTCATTACCAAAAAGGTTCGTCGCCGCCTGCGCTCGATATGCTTCTCCTTGCACTCGTGTGCGCAGCGATCTACC
GCTTCACCGTCCATACTGATGTCGCTCCCAGGGCTTGATGCAAGCCGAACGGCGGCACGGGTTTGAGGGCGATGG
TTTCGTATACCTTAGGAGTCCACTGTGGTGGGCAGGAATCGCTACGCGTGAGCCTCGTCCCGTTGGCGATGCGAC
CTGCTACCTCTCTTAACTGACGTCTTCCAGTCGGCATCGGCGAGATCTGCAACTTCGCCGCCTACGCATTCGCGC
CCGCCATTCTCGTCACCCCTCTCGGAGCCCTCAGCGTTCTGATAGGCGCGGTGCTGGGGTCATATTTCCTGGAGG
AAGAACTGGGGACACTCGGGAAGCTGGGGAGCGCCATTTGCCTCATTGGCGCTGTTGTCATCGTCCTACACGCCC
CCCCCGACGAGCAAATCGAGACCATTGACCAAATATTACACTACGCCATCCAACCAGGTACGAAATTGGAACCCC
GAAACCGAGCCGGCATCGTGTGGCCCTGACCTGTCCACCTCGTCTAGGGTTTTTGCTTTACGCCATTGCCGTCGT
CGCTTTTGCCGTCTTCATGATCTACAAGATTGCTCCTGTCTACGGCAAAAAGAACGCGCTCATTTACCTCTCGAT
CTGCTCGACCGTCGGCTCTATCTCCGTCATGTCTGTCAAAGCTTTCGGCATTGCGCTGAAACTGACTCTCGCCGG
CAACAATCAGTTTTCGCACCCCTCGACCTACGTCTTCATGATCCTGACCACTGTCTGTATCCTGACGCAGATGAA
TTACTTCAACAAAGCCCTGGCCTCTTTTCCGACAAACATGTCAGTCGCCCCGCGAGCTACCTACTCCTTTTGGAC
CCTTGTCTCGTGCGCCTTCAAACCTGCTAACTGCTTGGACTTGGCAGCGTAAATCCCCTATACTACGTGACCTTC
ACCACAGCCACCCTTTGCGCCTCCTTCATACTGTTCAGCGGCTTCAACACCACCGACCCCGTCAACACCCTTTCG
CTACTTTGCGGCTTCCTTGTGACATTTACCGGTGTCTACTTGCTCAATCTTTCCAGAGGCGACCCGAACGGAAAT
AACCTCACCGCAGGGCGGAGAGGTCTGGACGCTACGCCCACCGACATGGTATCCAGCCTGCAGACTCGCCGCAGT
ATGCAAGCACGCAGGAGCGGCGATCCTGGGCGACACAGCATCAGCAGCCTTCATGGCGACAGGGAAGGGTTGATC
CGGGCCTACGATGAGGAGGAGGCCGCCGGTTTCGGCCTCACGGACCTCGCGGGGGAGAGTGACGAGGATTCCCGC
GGAGCACACAACCGTCTCAACGGCAAGACGGAACTTAACACCAACGATATCGAGCTGGAAGATCGAAAGTCCGCT
GAGAGATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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