Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2330
Gene name
LocationContig_1550:827..2115
Strand+
Gene length (bp)1288
Transcript length (bp)882
Coding sequence length (bp)882
Protein length (aa) 294

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2966 0.9156 0.2058 0.0328 0.1317 0.0015 0.0155 0.0265 0.008 0.0128

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2042
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|830
Ophiocordyceps australis map64 (Brazil) OphauB2|7064
Ophiocordyceps camponoti-floridani Ophcf2|01177
Ophiocordyceps camponoti-rufipedis Ophun1|6724
Ophiocordyceps kimflemingae Ophio5|5500
Ophiocordyceps subramaniannii Hirsu2|2330 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2330
MPPAAHIFEPGLDAPALLQDLIREHLERASHDLDRTKPPPSPASGDFLLNEMGDYFCRTAMTWAYLTESLLKGPH
LEQATYRAHERSRTDSGMSDLSEVTRIDIDITRLRKIRDMAFDFSQQIQTTWRPQTPMMSSPPGMQTSISPFCDA
RLSSVSNKSMSVSSDGDQRSFKARKLLPDSHVQLHTDVGHRSDESDDTDDELFLEIDMEALRQRGKGSYSCPKGF
HCKKGGVDKEGNLVIFDRNSSFAQHCNKHRKPWRCDIPGCPNPPKKRRFARRDGLERHKTTVKHYVVT*
Coding >Hirsu2|2330
ATGCCTCCCGCCGCACACATCTTCGAGCCAGGTCTGGACGCTCCGGCCCTGCTCCAGGATCTCATACGCGAGCAC
CTCGAGCGCGCCTCGCACGACCTGGACAGGACTAAACCGCCGCCCTCGCCAGCCTCGGGCGACTTCCTGCTCAAC
GAGATGGGCGACTACTTTTGCCGCACCGCCATGACGTGGGCCTACCTCACCGAGAGCCTCCTCAAGGGCCCTCAT
CTAGAGCAGGCCACCTACCGGGCCCATGAGCGCTCCCGTACCGACAGCGGCATGTCCGACCTGTCCGAGGTGACG
CGCATTGACATTGACATAACCCGCCTCCGTAAGATTAGGGACATGGCCTTCGACTTCTCTCAACAGATTCAGACG
ACGTGGAGGCCGCAAACGCCCATGATGAGTTCGCCGCCGGGAATGCAGACGTCCATATCGCCCTTCTGTGACGCG
AGGTTGTCCAGCGTCTCCAACAAGTCCATGTCGGTGTCCAGCGACGGCGATCAACGATCTTTCAAGGCCCGCAAG
CTCCTGCCCGATAGCCACGTTCAGCTGCACACTGACGTCGGCCACCGATCGGACGAGTCAGATGACACAGATGAC
GAGCTGTTTCTAGAAATTGACATGGAGGCTCTGCGGCAGAGGGGCAAGGGCAGTTATTCTTGCCCCAAGGGTTTC
CACTGCAAAAAGGGGGGTGTTGACAAAGAGGGCAATCTTGTCATCTTCGACCGCAACTCGTCTTTCGCGCAGCAT
TGTAACAAGCATCGCAAGCCGTGGCGGTGTGACATACCGGGATGTCCCAATCCGCCCAAAAAGCGGAGATTCGCG
CGCCGGGATGGCTTAGAAAGGCACAAGACCACCGTCAAGCACTACGTCGTGACGTGA
Transcript >Hirsu2|2330
ATGCCTCCCGCCGCACACATCTTCGAGCCAGGTCTGGACGCTCCGGCCCTGCTCCAGGATCTCATACGCGAGCAC
CTCGAGCGCGCCTCGCACGACCTGGACAGGACTAAACCGCCGCCCTCGCCAGCCTCGGGCGACTTCCTGCTCAAC
GAGATGGGCGACTACTTTTGCCGCACCGCCATGACGTGGGCCTACCTCACCGAGAGCCTCCTCAAGGGCCCTCAT
CTAGAGCAGGCCACCTACCGGGCCCATGAGCGCTCCCGTACCGACAGCGGCATGTCCGACCTGTCCGAGGTGACG
CGCATTGACATTGACATAACCCGCCTCCGTAAGATTAGGGACATGGCCTTCGACTTCTCTCAACAGATTCAGACG
ACGTGGAGGCCGCAAACGCCCATGATGAGTTCGCCGCCGGGAATGCAGACGTCCATATCGCCCTTCTGTGACGCG
AGGTTGTCCAGCGTCTCCAACAAGTCCATGTCGGTGTCCAGCGACGGCGATCAACGATCTTTCAAGGCCCGCAAG
CTCCTGCCCGATAGCCACGTTCAGCTGCACACTGACGTCGGCCACCGATCGGACGAGTCAGATGACACAGATGAC
GAGCTGTTTCTAGAAATTGACATGGAGGCTCTGCGGCAGAGGGGCAAGGGCAGTTATTCTTGCCCCAAGGGTTTC
CACTGCAAAAAGGGGGGTGTTGACAAAGAGGGCAATCTTGTCATCTTCGACCGCAACTCGTCTTTCGCGCAGCAT
TGTAACAAGCATCGCAAGCCGTGGCGGTGTGACATACCGGGATGTCCCAATCCGCCCAAAAAGCGGAGATTCGCG
CGCCGGGATGGCTTAGAAAGGCACAAGACCACCGTCAAGCACTACGTCGTGACGTGA
Gene >Hirsu2|2330
ATGCCTCCCGCCGCACACATCTTCGAGCCAGGTCTGGACGCTCCGGCCCTGCTCCAGGATCTCATACGCGAGCAC
CTCGAGCGCGCCTCGCACGACCTGGACAGGACTAAACCGCCGCCCTCGCCAGCCTCGGGCGACTTCCTGCTCAAC
GAGATGGGCGACTACTTTTGCCGCACCGCCATGACGTGGGCCTACCTCACCGAGAGCCTCCTCAAGGGCCCTCAT
CTAGAGCAGGCCACCTACCGGGCCCATGAGCGCTCCCGTACCGACAGCGGCATGTCCGACCTGTCCGAGGTGACG
CGCATTGACATTGACATAACCCGCCTCCGGTATGATCACCTCGCCTGCTCACCTTTTACCTCCTCACCGCACCTC
GCCGCACCTCATCTCACCTTAGCCCGTCCGTCCTCATCTTGTCTTTTGCCGCCTCTCCCACCTCCCTTCACCGGG
CCACACATGACACCTCACCCGCCCCTTGCTCCAGTCGCAATACCTGGGTACACCCTGCCGAGGCTTCTTGGCGGG
TGCCTGCGACCAGGTCACCCTCCCTGACCCGTCTCTCCTTGCTTTCTCACCTACTTACTTTTTGCCCTCCACCGT
TGCCCTCCCGGTCTGTACGTGGCAGTAAGATTAGGGACATGGCCTTCGACTTCTCTCAACAGATTCAGACGACGT
GGAGGCCGCAAACGCCCATGATGAGTTCGCCGCCGGGAATGCAGACGTCCATATCGCCCTTCTGTGACGCGAGGT
TGTCCAGCGTCTCCAACAAGTCCATGTCGGTGTCCAGCGACGGCGATCAACGATCTTTCAAGGCCCGCAAGCTCC
TGCCCGATAGCCACGTTCAGCTGCACACTGACGTCGGCCACCGATCGGACGAGTCAGATGACACAGATGACGAGC
TGTTTCTAGAAATTGACATGGAGGCTCTGCGGCAGAGGGGCAAGGGCAGTTATTCTTGCCCCAAGGGTTTCCACT
GCAAAAAGGGGGGTGTTGACAAAGAGGGCAATCTTGTCATCTTCGACCGCAACTCGTCTTTCGCGTACGTAGTCA
AGAACAACTCATCCTCTTGGGCGCATCGCGCGGCTTGCGTCGCTGGCTGACACGACCCGCTCACATCGTTGCCCT
TGATTTGCTAACCTACCGGCGCAGGCAGCATTGTAACAAGCATCGCAAGCCGTGGCGGTGTGACATACCGGGATG
TCCCAATCCGCCCAAAAAGCGGAGATTCGCGCGCCGGGATGGCTTAGAAAGGCACAAGACCACCGTCAAGCACTA
CGTCGTGACGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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