Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|233
Gene name
LocationContig_1040:3..327
Strand+
Gene length (bp)324
Transcript length (bp)324
Coding sequence length (bp)324
Protein length (aa) 108

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.1817 0.1259 0.2328 0.0618 0.5428 0.0363 0.7782 0.3716 0.3068 0.0822

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2041
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2089
Ophiocordyceps australis map64 (Brazil) OphauB2|7479
Ophiocordyceps camponoti-floridani Ophcf2|04958
Ophiocordyceps camponoti-rufipedis Ophun1|5591
Ophiocordyceps kimflemingae Ophio5|6110
Ophiocordyceps subramaniannii Hirsu2|233 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|233
LLFAACCAGLPWTEPGTRVWRAADALFPGGAPLYRRLVRALCLPVLALHAAEACYFDRRLRRHGVDRWSALWWRW
ASSCFVEGVMAFRRFDAVVARKTAAKDGGKML*
Coding >Hirsu2|233
CTGCTCTTCGCCGCCTGCTGCGCCGGCCTGCCCTGGACCGAGCCCGGCACGCGCGTCTGGCGCGCCGCCGACGCC
CTCTTCCCCGGCGGCGCGCCCCTCTACCGCCGCCTGGTCCGCGCCCTGTGCCTGCCCGTGCTCGCCCTCCACGCC
GCCGAGGCCTGCTACTTCGACCGCCGCCTGCGCCGCCACGGCGTCGACCGCTGGTCCGCCCTTTGGTGGCGCTGG
GCCTCGAGCTGCTTCGTCGAGGGCGTCATGGCCTTCCGCCGCTTCGACGCCGTCGTCGCCCGCAAGACGGCCGCC
AAGGACGGCGGCAAGATGCTGTGA
Transcript >Hirsu2|233
CTGCTCTTCGCCGCCTGCTGCGCCGGCCTGCCCTGGACCGAGCCCGGCACGCGCGTCTGGCGCGCCGCCGACGCC
CTCTTCCCCGGCGGCGCGCCCCTCTACCGCCGCCTGGTCCGCGCCCTGTGCCTGCCCGTGCTCGCCCTCCACGCC
GCCGAGGCCTGCTACTTCGACCGCCGCCTGCGCCGCCACGGCGTCGACCGCTGGTCCGCCCTTTGGTGGCGCTGG
GCCTCGAGCTGCTTCGTCGAGGGCGTCATGGCCTTCCGCCGCTTCGACGCCGTCGTCGCCCGCAAGACGGCCGCC
AAGGACGGCGGCAAGATGCTGTGA
Gene >Hirsu2|233
CTGCTCTTCGCCGCCTGCTGCGCCGGCCTGCCCTGGACCGAGCCCGGCACGCGCGTCTGGCGCGCCGCCGACGCC
CTCTTCCCCGGCGGCGCGCCCCTCTACCGCCGCCTGGTCCGCGCCCTGTGCCTGCCCGTGCTCGCCCTCCACGCC
GCCGAGGCCTGCTACTTCGACCGCCGCCTGCGCCGCCACGGCGTCGACCGCTGGTCCGCCCTTTGGTGGCGCTGG
GCCTCGAGCTGCTTCGTCGAGGGCGTCATGGCCTTCCGCCGCTTCGACGCCGTCGTCGCCCGCAAGACGGCCGCC
AAGGACGGCGGCAAGATGCTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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