© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2328 |
| Gene name | |
| Location | Contig_155:23050..24278 |
| Strand | - |
| Gene length (bp) | 1228 |
| Transcript length (bp) | 1029 |
| Coding sequence length (bp) | 1029 |
| Protein length (aa) | 343 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09084 | NMT1 | NMT1/THI5 like | 1.7E-78 | 16 | 238 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P42882|NMT1_ASPPA | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase OS=Aspergillus parasiticus GN=nmt1 PE=2 SV=1 | 1 | 342 | 0.0E+00 |
| sp|O00057|NMT1_UROFA | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase OS=Uromyces fabae GN=PIG1 PE=2 SV=1 | 1 | 339 | 3.0E-168 |
| sp|Q07748|THI13_YEAST | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI13 PE=1 SV=1 | 1 | 336 | 3.0E-165 |
| sp|P43534|THI5_YEAST | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI5 PE=1 SV=1 | 1 | 336 | 6.0E-165 |
| sp|P42883|THI12_YEAST | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI12 PE=3 SV=1 | 1 | 336 | 9.0E-165 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P42882|NMT1_ASPPA | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase OS=Aspergillus parasiticus GN=nmt1 PE=2 SV=1 | 1 | 342 | 0.0E+00 |
| sp|O00057|NMT1_UROFA | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase OS=Uromyces fabae GN=PIG1 PE=2 SV=1 | 1 | 339 | 3.0E-168 |
| sp|Q07748|THI13_YEAST | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI13 PE=1 SV=1 | 1 | 336 | 3.0E-165 |
| sp|P43534|THI5_YEAST | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI5 PE=1 SV=1 | 1 | 336 | 6.0E-165 |
| sp|P42883|THI12_YEAST | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI12 PE=3 SV=1 | 1 | 336 | 9.0E-165 |
| sp|P47183|THI11_YEAST | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI11 PE=1 SV=1 | 1 | 336 | 4.0E-164 |
| sp|C4YMW2|THI5_CANAW | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase OS=Candida albicans (strain WO-1) GN=THI5 PE=1 SV=1 | 1 | 336 | 2.0E-162 |
| sp|Q5A3Y5|THI5_CANAL | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=THI13 PE=1 SV=1 | 1 | 336 | 3.0E-160 |
| sp|P36597|NMT1_SCHPO | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nmt1 PE=2 SV=1 | 1 | 332 | 1.0E-155 |
| sp|P44658|Y357_HAEIN | Putative thiamine biosynthesis protein HI_0357 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0357 PE=1 SV=1 | 2 | 284 | 5.0E-30 |
| sp|Q9K9G5|THIY_BACHD | Formylaminopyrimidine-binding protein OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=thiY PE=1 SV=1 | 2 | 271 | 4.0E-13 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6418 | 0.4076 | 0.1426 | 0.2701 | 0.2993 | 0.0268 | 0.0286 | 0.117 | 0.0802 | 0.0495 |
| Orthofinder run ID | 4 |
| Orthogroup | 2040 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2328 MSTDKITFLTNWHATPYHAPLYLAQAKGFFEEEGIKVAILEPNDPSDVTEIIGSGKVDMGFKAMIHTLAAKARGF PVQSIGSLLDEPFTGVVYLKESGITSDFRSLKGKRIGYVGEFGKIQIDELTSHYGLTPADYTAVRCGMNVSKAIT DGAVDAGIGLENVQMVELEEWLAARGRDRADVRMLRIDELAELGCCCFCSILYIGNEAFLAREPDKVRAFMRAVK RATDFVLSDPHAAWGEYVDAKPAMRSRLNEKIFERSFAYFSQDLKNVTRDWDKVTRYGQRLCVLGPDFAPNYTNN FLDWALEPDSDDPAGDQKRMAELQRDVACRGGFRRLPSAVAA* |
| Coding | >Hirsu2|2328 ATGTCGACCGATAAGATCACCTTCTTGACCAACTGGCACGCCACGCCCTACCACGCGCCACTCTACCTGGCCCAA GCCAAGGGATTCTTCGAAGAGGAGGGGATCAAGGTCGCCATTCTGGAACCGAACGACCCGAGCGATGTCACCGAG ATTATCGGCAGCGGCAAGGTTGATATGGGCTTCAAGGCTATGATTCACACCCTGGCTGCCAAGGCCCGCGGCTTC CCGGTCCAGTCCATCGGCAGCCTCCTGGATGAGCCCTTCACCGGCGTCGTCTACCTCAAGGAGTCGGGCATCACG AGCGACTTCCGCTCGCTCAAGGGCAAGCGCATCGGCTACGTCGGCGAGTTCGGCAAGATCCAGATCGACGAGCTG ACGTCGCACTACGGCCTCACGCCGGCCGACTACACGGCGGTGCGTTGCGGCATGAACGTGTCCAAGGCCATCACC GACGGCGCCGTCGACGCCGGCATCGGCCTCGAGAACGTGCAGATGGTCGAGCTGGAGGAGTGGCTGGCGGCGCGG GGCCGCGACCGAGCCGACGTGCGGATGTTGCGCATCGACGAGCTGGCCGAGCTCGGCTGCTGCTGCTTCTGCTCG ATCCTGTACATCGGCAACGAAGCCTTCCTCGCCCGCGAACCGGACAAGGTGCGCGCCTTCATGCGCGCCGTCAAG CGGGCGACCGACTTCGTCCTGAGCGACCCGCACGCCGCCTGGGGCGAGTACGTCGACGCCAAGCCGGCCATGCGC TCGCGGCTCAACGAGAAGATCTTCGAGCGCAGCTTCGCCTACTTCTCGCAGGACCTCAAGAACGTCACGCGCGAC TGGGACAAGGTCACCCGCTACGGCCAGAGGCTCTGCGTCCTGGGCCCCGACTTTGCGCCCAACTACACCAACAAC TTCTTGGACTGGGCCCTCGAGCCCGACTCGGACGATCCGGCCGGCGACCAGAAGCGCATGGCGGAGCTGCAGAGG GACGTTGCCTGCCGTGGCGGCTTCCGAAGACTCCCTTCGGCCGTGGCGGCTTGA |
| Transcript | >Hirsu2|2328 ATGTCGACCGATAAGATCACCTTCTTGACCAACTGGCACGCCACGCCCTACCACGCGCCACTCTACCTGGCCCAA GCCAAGGGATTCTTCGAAGAGGAGGGGATCAAGGTCGCCATTCTGGAACCGAACGACCCGAGCGATGTCACCGAG ATTATCGGCAGCGGCAAGGTTGATATGGGCTTCAAGGCTATGATTCACACCCTGGCTGCCAAGGCCCGCGGCTTC CCGGTCCAGTCCATCGGCAGCCTCCTGGATGAGCCCTTCACCGGCGTCGTCTACCTCAAGGAGTCGGGCATCACG AGCGACTTCCGCTCGCTCAAGGGCAAGCGCATCGGCTACGTCGGCGAGTTCGGCAAGATCCAGATCGACGAGCTG ACGTCGCACTACGGCCTCACGCCGGCCGACTACACGGCGGTGCGTTGCGGCATGAACGTGTCCAAGGCCATCACC GACGGCGCCGTCGACGCCGGCATCGGCCTCGAGAACGTGCAGATGGTCGAGCTGGAGGAGTGGCTGGCGGCGCGG GGCCGCGACCGAGCCGACGTGCGGATGTTGCGCATCGACGAGCTGGCCGAGCTCGGCTGCTGCTGCTTCTGCTCG ATCCTGTACATCGGCAACGAAGCCTTCCTCGCCCGCGAACCGGACAAGGTGCGCGCCTTCATGCGCGCCGTCAAG CGGGCGACCGACTTCGTCCTGAGCGACCCGCACGCCGCCTGGGGCGAGTACGTCGACGCCAAGCCGGCCATGCGC TCGCGGCTCAACGAGAAGATCTTCGAGCGCAGCTTCGCCTACTTCTCGCAGGACCTCAAGAACGTCACGCGCGAC TGGGACAAGGTCACCCGCTACGGCCAGAGGCTCTGCGTCCTGGGCCCCGACTTTGCGCCCAACTACACCAACAAC TTCTTGGACTGGGCCCTCGAGCCCGACTCGGACGATCCGGCCGGCGACCAGAAGCGCATGGCGGAGCTGCAGAGG GACGTTGCCTGCCGTGGCGGCTTCCGAAGACTCCCTTCGGCCGTGGCGGCTTGA |
| Gene | >Hirsu2|2328 ATGTCGACCGATAAGATCACCTTCTTGACCAACTGGTAGGCTGGTCACTCAGAGGGGGATGTCGAAGCACGCTTG CGGCTGACCGTTGTATTGCCAAGGCACGCCACGCCCTACCACGCGCCACTCTACCTGGCCCAAGCCAAGGGATTC TTCGAAGAGGAGGGGATCAAGGTCGCCATTCTGGAACCGAACGACCCGAGCGTACGTGCGCCCCGCGACCTCCCC TGTCAGTCTCAATACTGATGCGACCGCGGCCGCCAGGATGTCACCGAGATTATCGGCAGCGGCAAGGTTGATATG GGCTTCAAGGCTATGATTCACACCCTGGCTGTAAGATATCAAGCCCTCCCCGAAACACTCGTCAAGACCCTGGTT CTGACGCTGAATCTCACTCACCCCCCAACAGGCCAAGGCCCGCGGCTTCCCGGTCCAGTCCATCGGCAGCCTCCT GGATGAGCCCTTCACCGGCGTCGTCTACCTCAAGGAGTCGGGCATCACGAGCGACTTCCGCTCGCTCAAGGGCAA GCGCATCGGCTACGTCGGCGAGTTCGGCAAGATCCAGATCGACGAGCTGACGTCGCACTACGGCCTCACGCCGGC CGACTACACGGCGGTGCGTTGCGGCATGAACGTGTCCAAGGCCATCACCGACGGCGCCGTCGACGCCGGCATCGG CCTCGAGAACGTGCAGATGGTCGAGCTGGAGGAGTGGCTGGCGGCGCGGGGCCGCGACCGAGCCGACGTGCGGAT GTTGCGCATCGACGAGCTGGCCGAGCTCGGCTGCTGCTGCTTCTGCTCGATCCTGTACATCGGCAACGAAGCCTT CCTCGCCCGCGAACCGGACAAGGTGCGCGCCTTCATGCGCGCCGTCAAGCGGGCGACCGACTTCGTCCTGAGCGA CCCGCACGCCGCCTGGGGCGAGTACGTCGACGCCAAGCCGGCCATGCGCTCGCGGCTCAACGAGAAGATCTTCGA GCGCAGCTTCGCCTACTTCTCGCAGGACCTCAAGAACGTCACGCGCGACTGGGACAAGGTCACCCGCTACGGCCA GAGGCTCTGCGTCCTGGGCCCCGACTTTGCGCCCAACTACACCAACAACTTCTTGGACTGGGCCCTCGAGCCCGA CTCGGACGATCCGGCCGGCGACCAGAAGCGCATGGCGGAGCTGCAGAGGGACGTTGCCTGCCGTGGCGGCTTCCG AAGACTCCCTTCGGCCGTGGCGGCTTGA |