Protein ID | Hirsu2|2323 |
Gene name | |
Location | Contig_155:8009..8782 |
Strand | + |
Gene length (bp) | 773 |
Transcript length (bp) | 609 |
Coding sequence length (bp) | 609 |
Protein length (aa) | 203 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09362 | DUF1996 | Domain of unknown function (DUF1996) | 3.5E-38 | 1 | 130 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1979 | 0.3238 | 0.9565 | 0.147 | 0.2068 | 0.0844 | 0.187 | 0.0581 | 0.0601 | 0.1416 |
Orthofinder run ID | 4 |
Orthogroup | 6062 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2323 MVVGDPYLRTFDASKPEQRAISHVCLGQDRSVDTPHLPSTPCLRLRAETFFPSCWDGRNLDSADHKSHMAFPAIG DYNTGVCPASHPVALLSVFLEFFYDTGAVRDFGRWVWAMGDPTGYGLHGDFVNGWADQGALERAMGSCTGARGVD DPRCSLNVGPGGPGRSSRRSPQTEPPPEEVGLRGPLDRLPGDNPVTGDTVRG* |
Coding | >Hirsu2|2323 ATGGTCGTGGGCGATCCCTACTTGCGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGCACGTATGC CTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCGAGACCTTC TTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATATGGCGTTCCCGGCCATCGGC GACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCGAGTTCTTCTACGAC ACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACGGCCTGCACGGCGAC TTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCGCCCGCGGCGTCGAC GACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCCCGCAGACGGAGCCG CCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGACGGGGGACACGGTC CGGGGATGA |
Transcript | >Hirsu2|2323 ATGGTCGTGGGCGATCCCTACTTGCGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGCACGTATGC CTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCGAGACCTTC TTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATATGGCGTTCCCGGCCATCGGC GACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCGAGTTCTTCTACGAC ACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACGGCCTGCACGGCGAC TTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCGCCCGCGGCGTCGAC GACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCCCGCAGACGGAGCCG CCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGACGGGGGACACGGTC CGGGGATGA |
Gene | >Hirsu2|2323 ATGGTCGTGGGCGATCCCTACTTGCGGTCAGCGCTCCTGTTGTGTTTGAGATGCAGGGACATGGCGCTGTGGAAG ACGAGACCTTCTCCCCTGCTGACGGCGAGAGCAGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGC ACGTATGCCTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCG AGACCTTCTTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATGTAAGCCACACTC CCCCTTCTCCCCCCCTGAAGCCCACGGTCCCGCTGATTGCTGCCGGCCGGGCATCGGGCGGCCCGTAGATGGCGT TCCCGGCCATCGGCGACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCG AGTTCTTCTACGACACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACG GCCTGCACGGCGACTTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCG CCCGCGGCGTCGACGACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCC CGCAGACGGAGCCGCCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGA CGGGGGACACGGTCCGGGGATGA |