Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2323
Gene name
LocationContig_155:8009..8782
Strand+
Gene length (bp)773
Transcript length (bp)609
Coding sequence length (bp)609
Protein length (aa) 203

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09362 DUF1996 Domain of unknown function (DUF1996) 3.5E-38 1 130

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1979 0.3238 0.9565 0.147 0.2068 0.0844 0.187 0.0581 0.0601 0.1416

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6062
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|01065
Ophiocordyceps camponoti-rufipedis Ophun1|6682
Ophiocordyceps kimflemingae Ophio5|3618
Ophiocordyceps subramaniannii Hirsu2|2323 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2323
MVVGDPYLRTFDASKPEQRAISHVCLGQDRSVDTPHLPSTPCLRLRAETFFPSCWDGRNLDSADHKSHMAFPAIG
DYNTGVCPASHPVALLSVFLEFFYDTGAVRDFGRWVWAMGDPTGYGLHGDFVNGWADQGALERAMGSCTGARGVD
DPRCSLNVGPGGPGRSSRRSPQTEPPPEEVGLRGPLDRLPGDNPVTGDTVRG*
Coding >Hirsu2|2323
ATGGTCGTGGGCGATCCCTACTTGCGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGCACGTATGC
CTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCGAGACCTTC
TTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATATGGCGTTCCCGGCCATCGGC
GACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCGAGTTCTTCTACGAC
ACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACGGCCTGCACGGCGAC
TTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCGCCCGCGGCGTCGAC
GACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCCCGCAGACGGAGCCG
CCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGACGGGGGACACGGTC
CGGGGATGA
Transcript >Hirsu2|2323
ATGGTCGTGGGCGATCCCTACTTGCGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGCACGTATGC
CTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCGAGACCTTC
TTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATATGGCGTTCCCGGCCATCGGC
GACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCGAGTTCTTCTACGAC
ACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACGGCCTGCACGGCGAC
TTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCGCCCGCGGCGTCGAC
GACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCCCGCAGACGGAGCCG
CCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGACGGGGGACACGGTC
CGGGGATGA
Gene >Hirsu2|2323
ATGGTCGTGGGCGATCCCTACTTGCGGTCAGCGCTCCTGTTGTGTTTGAGATGCAGGGACATGGCGCTGTGGAAG
ACGAGACCTTCTCCCCTGCTGACGGCGAGAGCAGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGC
ACGTATGCCTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCG
AGACCTTCTTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATGTAAGCCACACTC
CCCCTTCTCCCCCCCTGAAGCCCACGGTCCCGCTGATTGCTGCCGGCCGGGCATCGGGCGGCCCGTAGATGGCGT
TCCCGGCCATCGGCGACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCG
AGTTCTTCTACGACACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACG
GCCTGCACGGCGACTTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCG
CCCGCGGCGTCGACGACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCC
CGCAGACGGAGCCGCCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGA
CGGGGGACACGGTCCGGGGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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