© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2323 |
| Gene name | |
| Location | Contig_155:8009..8782 |
| Strand | + |
| Gene length (bp) | 773 |
| Transcript length (bp) | 609 |
| Coding sequence length (bp) | 609 |
| Protein length (aa) | 203 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09362 | DUF1996 | Domain of unknown function (DUF1996) | 3.5E-38 | 1 | 130 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1979 | 0.3238 | 0.9565 | 0.147 | 0.2068 | 0.0844 | 0.187 | 0.0581 | 0.0601 | 0.1416 |
| Orthofinder run ID | 4 |
| Orthogroup | 6062 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2323 MVVGDPYLRTFDASKPEQRAISHVCLGQDRSVDTPHLPSTPCLRLRAETFFPSCWDGRNLDSADHKSHMAFPAIG DYNTGVCPASHPVALLSVFLEFFYDTGAVRDFGRWVWAMGDPTGYGLHGDFVNGWADQGALERAMGSCTGARGVD DPRCSLNVGPGGPGRSSRRSPQTEPPPEEVGLRGPLDRLPGDNPVTGDTVRG* |
| Coding | >Hirsu2|2323 ATGGTCGTGGGCGATCCCTACTTGCGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGCACGTATGC CTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCGAGACCTTC TTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATATGGCGTTCCCGGCCATCGGC GACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCGAGTTCTTCTACGAC ACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACGGCCTGCACGGCGAC TTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCGCCCGCGGCGTCGAC GACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCCCGCAGACGGAGCCG CCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGACGGGGGACACGGTC CGGGGATGA |
| Transcript | >Hirsu2|2323 ATGGTCGTGGGCGATCCCTACTTGCGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGCACGTATGC CTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCGAGACCTTC TTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATATGGCGTTCCCGGCCATCGGC GACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCGAGTTCTTCTACGAC ACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACGGCCTGCACGGCGAC TTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCGCCCGCGGCGTCGAC GACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCCCGCAGACGGAGCCG CCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGACGGGGGACACGGTC CGGGGATGA |
| Gene | >Hirsu2|2323 ATGGTCGTGGGCGATCCCTACTTGCGGTCAGCGCTCCTGTTGTGTTTGAGATGCAGGGACATGGCGCTGTGGAAG ACGAGACCTTCTCCCCTGCTGACGGCGAGAGCAGAACCTTCGATGCCTCCAAGCCCGAGCAGCGGGCCATCTCGC ACGTATGCCTGGGGCAAGACCGCTCCGTCGACACGCCGCATCTGCCGTCGACGCCGTGCCTGCGCCTCCGGGCCG AGACCTTCTTCCCCTCGTGCTGGGACGGGCGGAACCTGGACAGCGCGGACCACAAGAGCCATGTAAGCCACACTC CCCCTTCTCCCCCCCTGAAGCCCACGGTCCCGCTGATTGCTGCCGGCCGGGCATCGGGCGGCCCGTAGATGGCGT TCCCGGCCATCGGCGACTACAACACCGGCGTCTGCCCGGCCTCGCACCCGGTGGCCCTGCTGTCCGTCTTCCTCG AGTTCTTCTACGACACGGGCGCCGTCCGCGACTTCGGCCGCTGGGTCTGGGCCATGGGCGACCCGACCGGCTACG GCCTGCACGGCGACTTCGTCAACGGCTGGGCCGACCAGGGCGCGCTCGAGCGCGCCATGGGCTCCTGCACCGGCG CCCGCGGCGTCGACGACCCGCGCTGCAGCCTCAACGTCGGGCCCGGCGGGCCCGGCCGCTCCTCCCGCCGGAGCC CGCAGACGGAGCCGCCGCCGGAGGAGGTCGGCCTGCGCGGGCCGCTGGACAGGCTGCCGGGCGACAACCCGGTGA CGGGGGACACGGTCCGGGGATGA |