Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2319
Gene name
LocationContig_1549:21..1232
Strand-
Gene length (bp)1211
Transcript length (bp)1017
Coding sequence length (bp)1017
Protein length (aa) 339

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09346 SMI1_KNR4 SMI1 / KNR4 family (SUKH-1) 1.2E-32 145 329

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38678|GS1_NEUCR Glucan synthesis regulatory protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cot-2 PE=2 SV=1 10 330 3.0E-135
sp|Q6CDX0|SMI1_YARLI KNR4/SMI1 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0B20570g PE=3 SV=1 6 330 2.0E-71
sp|O14362|SMI1_SCHPO Cell wall biosynthesis/cell cycle regulator smi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=smi1 PE=1 SV=1 4 330 8.0E-70
sp|Q6BJY4|SMI2_DEBHA KNR4/SMI1 homolog 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DEHA2F26422g PE=3 SV=2 5 328 2.0E-62
sp|P32566|SMI1_YEAST Cell wall assembly regulator SMI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMI1 PE=1 SV=1 77 328 2.0E-39
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Swissprot ID Swissprot Description Start End E-value
sp|P38678|GS1_NEUCR Glucan synthesis regulatory protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cot-2 PE=2 SV=1 10 330 3.0E-135
sp|Q6CDX0|SMI1_YARLI KNR4/SMI1 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0B20570g PE=3 SV=1 6 330 2.0E-71
sp|O14362|SMI1_SCHPO Cell wall biosynthesis/cell cycle regulator smi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=smi1 PE=1 SV=1 4 330 8.0E-70
sp|Q6BJY4|SMI2_DEBHA KNR4/SMI1 homolog 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DEHA2F26422g PE=3 SV=2 5 328 2.0E-62
sp|P32566|SMI1_YEAST Cell wall assembly regulator SMI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMI1 PE=1 SV=1 77 328 2.0E-39
sp|Q75AQ9|SMI1_ASHGO KNR4/SMI1 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ADL139W PE=3 SV=2 123 328 9.0E-38
sp|Q6CN28|SMI1_KLULA KNR4/SMI1 homolog OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0E15862g PE=3 SV=1 123 328 2.0E-37
sp|Q6FL35|SMI1_CANGA KNR4/SMI1 homolog OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0L06534g PE=3 SV=1 78 328 1.0E-35
sp|Q6BW41|SMI1_DEBHA KNR4/SMI1 homolog 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DEHA2B14542g PE=3 SV=2 120 331 2.0E-26
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.4974 0.3078 0.0944 0.2041 0.353 0.0228 0.2033 0.3598 0.4529 0.0645

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2036
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4016
Ophiocordyceps australis map64 (Brazil) OphauB2|1376
Ophiocordyceps camponoti-floridani Ophcf2|05845
Ophiocordyceps camponoti-rufipedis Ophun1|654
Ophiocordyceps kimflemingae Ophio5|299
Ophiocordyceps subramaniannii Hirsu2|2319 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2319
MDNSGFGSALRSFWHTMTSYDRHSSYHSPHRTGRHVPLQNGRNSILTGVATASDSHADVSYTYSDDTARASPLVG
PASNGAYSPGMRSVAAKQADGFEVQSPGDVPMQPFADGLPPPPPVSHSWKRIDAWAEDNYPELFDQLCEGATTND
LNDLEHQLDCSLPQDVRESLMIHDGQERGGTPTGIVFGSMLMDCEEIVQEWETWRKVNQQFLLDAPSPPPVTPLK
AFVGGAASSEASSSRQRPSSSSSASNGDEWRQTLLSRQDSVPPNAVQRTYAHVGWIPLVRDWGGNNLAVDLAPGP
GGRWGQIVLFGRDYDTKYVVARSWAAFLALWRAQAAGI*
Coding >Hirsu2|2319
ATGGACAACTCTGGCTTCGGCTCCGCCCTACGCTCCTTCTGGCACACCATGACCAGCTACGACAGACATTCCTCG
TACCACTCGCCGCACCGCACCGGCCGCCACGTCCCCCTGCAAAACGGCCGCAACAGCATCCTGACCGGCGTCGCC
ACCGCCTCCGACTCCCACGCCGACGTCAGCTACACCTATTCCGACGACACGGCCCGCGCCTCGCCCCTCGTCGGC
CCCGCCTCCAACGGCGCCTACTCGCCCGGCATGCGCTCCGTCGCCGCCAAGCAGGCCGACGGCTTCGAGGTCCAG
AGCCCGGGCGACGTGCCCATGCAGCCCTTCGCCGACGGCCTCCCGCCCCCGCCGCCCGTCAGCCACTCGTGGAAG
CGCATCGACGCCTGGGCCGAGGACAACTACCCCGAGCTCTTTGACCAGCTGTGCGAGGGCGCCACCACCAACGAC
CTCAACGACCTCGAACACCAGCTCGACTGCTCCCTGCCCCAGGACGTCCGCGAGTCGCTCATGATCCACGACGGC
CAGGAGCGCGGCGGCACCCCGACCGGCATCGTCTTCGGCTCCATGCTCATGGACTGCGAGGAGATTGTCCAGGAG
TGGGAGACGTGGCGCAAGGTCAACCAGCAGTTCCTGCTCGACGCCCCGAGCCCCCCGCCCGTCACGCCCCTCAAG
GCCTTCGTCGGCGGCGCCGCCAGCAGCGAGGCCTCGTCGTCGCGCCAGCGGCCCTCGTCGTCGTCGTCGGCCAGC
AACGGAGACGAGTGGCGCCAGACGCTGCTGTCGCGCCAGGACTCGGTCCCGCCCAACGCCGTCCAGAGGACCTAC
GCCCACGTCGGCTGGATCCCCCTGGTGCGCGACTGGGGCGGCAACAACCTGGCCGTCGACCTGGCCCCGGGGCCC
GGCGGCCGCTGGGGGCAGATCGTCCTCTTCGGCCGGGACTACGACACCAAGTACGTCGTGGCCCGCTCCTGGGCC
GCCTTCCTGGCCCTCTGGCGAGCTCAAGCTGCGGGAATTTAA
Transcript >Hirsu2|2319
ATGGACAACTCTGGCTTCGGCTCCGCCCTACGCTCCTTCTGGCACACCATGACCAGCTACGACAGACATTCCTCG
TACCACTCGCCGCACCGCACCGGCCGCCACGTCCCCCTGCAAAACGGCCGCAACAGCATCCTGACCGGCGTCGCC
ACCGCCTCCGACTCCCACGCCGACGTCAGCTACACCTATTCCGACGACACGGCCCGCGCCTCGCCCCTCGTCGGC
CCCGCCTCCAACGGCGCCTACTCGCCCGGCATGCGCTCCGTCGCCGCCAAGCAGGCCGACGGCTTCGAGGTCCAG
AGCCCGGGCGACGTGCCCATGCAGCCCTTCGCCGACGGCCTCCCGCCCCCGCCGCCCGTCAGCCACTCGTGGAAG
CGCATCGACGCCTGGGCCGAGGACAACTACCCCGAGCTCTTTGACCAGCTGTGCGAGGGCGCCACCACCAACGAC
CTCAACGACCTCGAACACCAGCTCGACTGCTCCCTGCCCCAGGACGTCCGCGAGTCGCTCATGATCCACGACGGC
CAGGAGCGCGGCGGCACCCCGACCGGCATCGTCTTCGGCTCCATGCTCATGGACTGCGAGGAGATTGTCCAGGAG
TGGGAGACGTGGCGCAAGGTCAACCAGCAGTTCCTGCTCGACGCCCCGAGCCCCCCGCCCGTCACGCCCCTCAAG
GCCTTCGTCGGCGGCGCCGCCAGCAGCGAGGCCTCGTCGTCGCGCCAGCGGCCCTCGTCGTCGTCGTCGGCCAGC
AACGGAGACGAGTGGCGCCAGACGCTGCTGTCGCGCCAGGACTCGGTCCCGCCCAACGCCGTCCAGAGGACCTAC
GCCCACGTCGGCTGGATCCCCCTGGTGCGCGACTGGGGCGGCAACAACCTGGCCGTCGACCTGGCCCCGGGGCCC
GGCGGCCGCTGGGGGCAGATCGTCCTCTTCGGCCGGGACTACGACACCAAGTACGTCGTGGCCCGCTCCTGGGCC
GCCTTCCTGGCCCTCTGGCGAGCTCAAGCTGCGGGAATTTAA
Gene >Hirsu2|2319
ATGGACAACTCTGGGTAGGCCCCCTCGTCCCTCTCCTGACACGCCTTGCGTTGCGGACAGGGACGGCGTTCGCTG
ATCATAGAGCTCCAGCTTCGGCTCCGCCCTACGCTCCTTCTGGCACACCATGACCAGCTACGACAGACGTGAGGA
AACAACCTTGTCGATGGCGCCCCGACGCGTAGCCGCTGACGTGGGAGCCGCACCACAACAACAGATTCCTCGTAC
CACTCGCCGCACCGCACCGGCCGCCACGTCCCCCTGCAAAACGGCCGCAACAGCATCCTGACCGGCGTCGCCACC
GCCTCCGACTCCCACGCCGACGTCAGCTACACCTATTCCGACGACACGGCCCGCGCCTCGCCCCTCGTCGGCCCC
GCCTCCAACGGCGCCTACTCGCCCGGCATGCGCTCCGTCGCCGCCAAGCAGGCCGACGGCTTCGAGGTCCAGAGC
CCGGGCGACGTGCCCATGCAGCCCTTCGCCGACGGCCTCCCGCCCCCGCCGCCCGTCAGCCACTCGTGGAAGCGC
ATCGACGCCTGGGCCGAGGACAACTACCCCGAGCTCTTTGACCAGCTGTGCGAGGGCGCCACCACCAACGACCTC
AACGACCTCGAACACCAGCTCGACTGCTCCCTGCCCCAGGACGTCCGCGAGTCGCTCATGATCCACGACGGCCAG
GAGCGCGGCGGCACCCCGACCGGCATCGTCTTCGGCTCCATGCTCATGGACTGCGAGGAGATTGTCCAGGAGTGG
GAGACGTGGCGCAAGGTCAACCAGCAGTTCCTGCTCGACGCCCCGAGCCCCCCGCCCGTCACGCCCCTCAAGGCC
TTCGTCGGCGGCGCCGCCAGCAGCGAGGCCTCGTCGTCGCGCCAGCGGCCCTCGTCGTCGTCGTCGGCCAGCAAC
GGAGACGAGTGGCGCCAGACGCTGCTGTCGCGCCAGGACTCGGTCCCGCCCAACGCCGTCCAGAGGACCTACGCC
CACGTCGGCTGGATCCCCCTGGTGCGCGACTGGGGCGGCAACAACCTGGCCGTCGACCTGGCCCCGGGGCCCGGC
GGCCGCTGGGGGCAGATCGTCCTCTTCGGCCGGGACTACGACACCAAGTACGTCGTGGCCCGCTCCTGGGCCGCC
TTCCTGGCCCTCGTCGCCGACGACCTCAACAGCGGCAAGTGGTTCGTCGACGACGACAGTGGCGAGCTCAAGCTG
CGGGAATTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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