Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2318
Gene name
LocationContig_1548:4474..5835
Strand+
Gene length (bp)1361
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11754 Velvet Velvet factor 8.0E-18 100 167
PF11754 Velvet Velvet factor 5.1E-34 173 291

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5631 0.6953 0.3628 0.0796 0.1762 0.0949 0.1227 0.2355 0.0645 0.1056

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2035
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1272
Ophiocordyceps australis map64 (Brazil) OphauB2|7671
Ophiocordyceps camponoti-floridani Ophcf2|00489
Ophiocordyceps camponoti-rufipedis Ophun1|2048
Ophiocordyceps kimflemingae Ophio5|7096
Ophiocordyceps subramaniannii Hirsu2|2318 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2318
LPPAHALSFDDDDALPCDLVGLFSRRRASSRPAGRGVLHRQSASVQIPRPRPDPSPLTLLPIRRRAHDTMATPAS
IPTNCSRESVQRIHRVTRENRNLWYQLTVLQQPERARACGSGMKANSDRRPVDPPPVVELRIIEGPSVEEGKDVT
FDYNANFFLYASLEQARNIAHGRVQTPAASNPPILTGVPASGMAYLDRPAEAGYFIFPDLSVRHEGYFRLSFSLF
ETTKEEKDFDLEPSDSDLPPGVDWRMEIKTQPFNVYSAKKFPGLMESTQLSKTVADQGCRVRIRRDTTTTRAAGP
*
Coding >Hirsu2|2318
CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC
CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA
AGGCCCGATCCATCCCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCC
ATCCCGACCAACTGCTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTAT
CAGTTGACCGTGCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGCCAACAGCGACCGACGT
CCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGAGGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACC
TTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGAGCAGGCCCGCAACATCGCTCACGGCCGCGTCCAG
ACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCCCGCCTCCGGCATGGCCTACCTCGACCGTCCGGCC
GAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCACGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTC
GAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTCCGACAGCGATCTGCCGCCCGGCGTCGACTGGCGC
ATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAAGAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTG
AGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCGCCGCGACACGACGACTACCCGCGCCGCCGGACCG
TGA
Transcript >Hirsu2|2318
CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC
CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA
AGGCCCGATCCATCCCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCC
ATCCCGACCAACTGCTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTAT
CAGTTGACCGTGCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGCCAACAGCGACCGACGT
CCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGAGGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACC
TTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGAGCAGGCCCGCAACATCGCTCACGGCCGCGTCCAG
ACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCCCGCCTCCGGCATGGCCTACCTCGACCGTCCGGCC
GAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCACGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTC
GAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTCCGACAGCGATCTGCCGCCCGGCGTCGACTGGCGC
ATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAAGAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTG
AGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCGCCGCGACACGACGACTACCCGCGCCGCCGGACCG
TGA
Gene >Hirsu2|2318
CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC
CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA
AGGTGAGCCTCCCCGGCCCGGCCTCGTTGGCCCTCTGATCCTCTCCTCGCGCACCCGTCGACCGCCCGACCGGTC
CGCCGCGCTTTTCCGCCCTCGTGGCCCGTCCTCGTCACGTCACTGCCGCCTCATCCTTTCCTCGTGCATCCTGCA
CCGTCTTCATGCACGCCAAACGCTTCTTCAACGCCGGCCTTGTCGCTGACGCTCCGCTACCAGGCCCGATCCATC
CCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCCATCCCGACCAACTG
CTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTATCAGTTGACCGTGCT
CCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGGTGCGCACCGCCATCAATTCCCCTTTGCATC
CCATCTGCCTCGCGGCCGTGCCGTCGCCGGCCCCTCCCTCTTTTTACTCTCCCCGTCGCCCTGCGCTCGCTGCGT
GGCGGAACGACGTTGCCCGACGCCCTGCTGCCGTCGTCGCCGATGCCATCCATCGCCTCCCAGGTGACCTCGGAC
GCTGACCTCTTCGACAGCCAACAGCGACCGACGTCCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGA
GGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACCTTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGA
GCAGGCCCGCAACATCGCTCACGGCCGCGTCCAGACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCC
CGCCTCCGGCATGGCCTACCTCGACCGTCCGGCCGAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCA
CGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTCGAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTC
CGACAGCGATCTGCCGCCCGGCGTCGACTGGCGCATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAA
GAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTGAGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCG
CCGCGACGTGCGCATGAGGAAACGCGACGGCAAATCGAGCGGCTACGACCGACGAGACGACGACTACCCGCGCCG
CCGGACCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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