Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2318
Gene name
Location	Contig_1548:4474..5835
Strand	+
Gene length (bp)	1361
Transcript length (bp)	903
Coding sequence length (bp)	903
Protein length (aa)	301

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11754	Velvet	Velvet factor	8.0E-18	100	167
PF11754	Velvet	Velvet factor	5.1E-34	173	291

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 13	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2318 LPPAHALSFDDDDALPCDLVGLFSRRRASSRPAGRGVLHRQSASVQIPRPRPDPSPLTLLPIRRRAHDTMATPAS IPTNCSRESVQRIHRVTRENRNLWYQLTVLQQPERARACGSGMKANSDRRPVDPPPVVELRIIEGPSVEEGKDVT FDYNANFFLYASLEQARNIAHGRVQTPAASNPPILTGVPASGMAYLDRPAEAGYFIFPDLSVRHEGYFRLSFSLF ETTKEEKDFDLEPSDSDLPPGVDWRMEIKTQPFNVYSAKKFPGLMESTQLSKTVADQGCRVRIRRDTTTTRAAGP *
Coding	>Hirsu2\|2318 CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA AGGCCCGATCCATCCCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCC ATCCCGACCAACTGCTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTAT CAGTTGACCGTGCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGCCAACAGCGACCGACGT CCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGAGGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACC TTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGAGCAGGCCCGCAACATCGCTCACGGCCGCGTCCAG ACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCCCGCCTCCGGCATGGCCTACCTCGACCGTCCGGCC GAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCACGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTC GAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTCCGACAGCGATCTGCCGCCCGGCGTCGACTGGCGC ATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAAGAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTG AGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCGCCGCGACACGACGACTACCCGCGCCGCCGGACCG TGA
Transcript	>Hirsu2\|2318 CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA AGGCCCGATCCATCCCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCC ATCCCGACCAACTGCTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTAT CAGTTGACCGTGCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGCCAACAGCGACCGACGT CCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGAGGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACC TTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGAGCAGGCCCGCAACATCGCTCACGGCCGCGTCCAG ACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCCCGCCTCCGGCATGGCCTACCTCGACCGTCCGGCC GAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCACGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTC GAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTCCGACAGCGATCTGCCGCCCGGCGTCGACTGGCGC ATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAAGAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTG AGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCGCCGCGACACGACGACTACCCGCGCCGCCGGACCG TGA
Gene	>Hirsu2\|2318 CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA AGGTGAGCCTCCCCGGCCCGGCCTCGTTGGCCCTCTGATCCTCTCCTCGCGCACCCGTCGACCGCCCGACCGGTC CGCCGCGCTTTTCCGCCCTCGTGGCCCGTCCTCGTCACGTCACTGCCGCCTCATCCTTTCCTCGTGCATCCTGCA CCGTCTTCATGCACGCCAAACGCTTCTTCAACGCCGGCCTTGTCGCTGACGCTCCGCTACCAGGCCCGATCCATC CCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCCATCCCGACCAACTG CTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTATCAGTTGACCGTGCT CCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGGTGCGCACCGCCATCAATTCCCCTTTGCATC CCATCTGCCTCGCGGCCGTGCCGTCGCCGGCCCCTCCCTCTTTTTACTCTCCCCGTCGCCCTGCGCTCGCTGCGT GGCGGAACGACGTTGCCCGACGCCCTGCTGCCGTCGTCGCCGATGCCATCCATCGCCTCCCAGGTGACCTCGGAC GCTGACCTCTTCGACAGCCAACAGCGACCGACGTCCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGA GGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACCTTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGA GCAGGCCCGCAACATCGCTCACGGCCGCGTCCAGACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCC CGCCTCCGGCATGGCCTACCTCGACCGTCCGGCCGAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCA CGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTCGAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTC CGACAGCGATCTGCCGCCCGGCGTCGACTGGCGCATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAA GAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTGAGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCG CCGCGACGTGCGCATGAGGAAACGCGACGGCAAATCGAGCGGCTACGACCGACGAGACGACGACTACCCGCGCCG CCGGACCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail