Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2318
Gene name
LocationContig_1548:4474..5835
Strand+
Gene length (bp)1361
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11754 Velvet Velvet factor 5.7E-18 100 167
PF11754 Velvet Velvet factor 1.4E-34 173 291

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2318
LPPAHALSFDDDDALPCDLVGLFSRRRASSRPAGRGVLHRQSASVQIPRPRPDPSPLTLLPIRRRAHDTMATPAS
IPTNCSRESVQRIHRVTRENRNLWYQLTVLQQPERARACGSGMKANSDRRPVDPPPVVELRIIEGPSVEEGKDVT
FDYNANFFLYASLEQARNIAHGRVQTPAASNPPILTGVPASGMAYLDRPAEAGYFIFPDLSVRHEGYFRLSFSLF
ETTKEEKDFDLEPSDSDLPPGVDWRMEIKTQPFNVYSAKKFPGLMESTQLSKTVADQGCRVRIRRDTTTTRAAGP
*
Coding >Hirsu2|2318
CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC
CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA
AGGCCCGATCCATCCCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCC
ATCCCGACCAACTGCTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTAT
CAGTTGACCGTGCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGCCAACAGCGACCGACGT
CCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGAGGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACC
TTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGAGCAGGCCCGCAACATCGCTCACGGCCGCGTCCAG
ACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCCCGCCTCCGGCATGGCCTACCTCGACCGTCCGGCC
GAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCACGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTC
GAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTCCGACAGCGATCTGCCGCCCGGCGTCGACTGGCGC
ATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAAGAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTG
AGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCGCCGCGACACGACGACTACCCGCGCCGCCGGACCG
TGA
Transcript >Hirsu2|2318
CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC
CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA
AGGCCCGATCCATCCCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCC
ATCCCGACCAACTGCTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTAT
CAGTTGACCGTGCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGCCAACAGCGACCGACGT
CCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGAGGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACC
TTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGAGCAGGCCCGCAACATCGCTCACGGCCGCGTCCAG
ACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCCCGCCTCCGGCATGGCCTACCTCGACCGTCCGGCC
GAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCACGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTC
GAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTCCGACAGCGATCTGCCGCCCGGCGTCGACTGGCGC
ATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAAGAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTG
AGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCGCCGCGACACGACGACTACCCGCGCCGCCGGACCG
TGA
Gene >Hirsu2|2318
CTGCCGCCCGCGCATGCCCTCTCCTTCGACGACGACGACGCCCTGCCCTGCGACCTCGTAGGCCTCTTCTCTCGC
CGCCGGGCCAGCAGCAGGCCGGCTGGCCGTGGCGTCCTCCATCGCCAGTCCGCCTCGGTGCAAATCCCTCGCCCA
AGGTGAGCCTCCCCGGCCCGGCCTCGTTGGCCCTCTGATCCTCTCCTCGCGCACCCGTCGACCGCCCGACCGGTC
CGCCGCGCTTTTCCGCCCTCGTGGCCCGTCCTCGTCACGTCACTGCCGCCTCATCCTTTCCTCGTGCATCCTGCA
CCGTCTTCATGCACGCCAAACGCTTCTTCAACGCCGGCCTTGTCGCTGACGCTCCGCTACCAGGCCCGATCCATC
CCCTCTCACCCTGCTGCCCATCCGCCGCCGTGCCCACGACACAATGGCGACGCCCGCCTCCATCCCGACCAACTG
CTCGCGAGAGTCGGTCCAGCGCATCCACCGCGTCACCAGAGAAAACCGCAACCTCTGGTATCAGTTGACCGTGCT
CCAGCAGCCCGAGCGTGCCCGAGCATGCGGTTCCGGCATGAAAGGTGCGCACCGCCATCAATTCCCCTTTGCATC
CCATCTGCCTCGCGGCCGTGCCGTCGCCGGCCCCTCCCTCTTTTTACTCTCCCCGTCGCCCTGCGCTCGCTGCGT
GGCGGAACGACGTTGCCCGACGCCCTGCTGCCGTCGTCGCCGATGCCATCCATCGCCTCCCAGGTGACCTCGGAC
GCTGACCTCTTCGACAGCCAACAGCGACCGACGTCCGGTGGATCCCCCGCCCGTCGTGGAGCTCCGCATCATTGA
GGGCCCCTCGGTGGAGGAGGGCAAGGACGTCACCTTCGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTGGA
GCAGGCCCGCAACATCGCTCACGGCCGCGTCCAGACCCCCGCCGCCAGCAATCCGCCGATCCTGACGGGCGTCCC
CGCCTCCGGCATGGCCTACCTCGACCGTCCGGCCGAGGCGGGCTACTTCATCTTCCCCGACCTCTCCGTCCGCCA
CGAGGGCTACTTCCGCCTGTCCTTCAGCCTGTTCGAGACGACCAAGGAGGAAAAGGACTTCGACCTCGAGCCGTC
CGACAGCGATCTGCCGCCCGGCGTCGACTGGCGCATGGAGATCAAGACGCAGCCCTTCAACGTCTACAGCGCCAA
GAAGTTCCCCGGCCTGATGGAGAGCACCCAGCTGAGCAAGACGGTGGCCGACCAGGGCTGCCGCGTGCGCATCCG
CCGCGACGTGCGCATGAGGAAACGCGACGGCAAATCGAGCGGCTACGACCGACGAGACGACGACTACCCGCGCCG
CCGGACCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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