© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2317 |
| Gene name | |
| Location | Contig_1547:5223..5902 |
| Strand | + |
| Gene length (bp) | 679 |
| Transcript length (bp) | 633 |
| Coding sequence length (bp) | 633 |
| Protein length (aa) | 211 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.1625 | 0.0931 | 0.0902 | 0.0898 | 0.9148 | 0.0981 | 0.0571 | 0.0327 | 0.0821 | 0.0068 |
| Orthofinder run ID | 4 |
| Orthogroup | 218 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2317 MLPRTIGALARPAAAASASASTAAAAAAYRAPTAAALLPNLCQGRSHARAFASESGDGPERQAEQKPTSPRPKKK QAKKAKNPTSSPSQPVNYFPPGAPHVEYATESLGGPVGLSWTPTALYVACGKGRRRLEAVLLRDSCTCAACRDPS SGNKKYSVTELGDGLALEAVQPREDGLLLTFGNDIPRLAGVADESGGAAKHETLMPGRRG* |
| Coding | >Hirsu2|2317 ATGCTGCCTCGTACGATAGGCGCCCTTGCTCGGCCTGCTGCTGCGGCATCGGCGTCGGCCTCGACAGCCGCAGCC GCAGCCGCATATCGCGCCCCCACGGCGGCGGCGCTGCTCCCGAATCTCTGCCAAGGCCGCTCGCACGCCCGCGCC TTCGCGTCCGAGAGCGGGGACGGGCCGGAGCGGCAGGCCGAGCAGAAGCCGACGAGCCCGAGGCCGAAGAAGAAG CAGGCCAAGAAGGCCAAGAATCCGACGAGCAGCCCGTCGCAGCCGGTCAACTACTTCCCGCCGGGCGCGCCGCAC GTCGAGTACGCGACGGAGAGCCTCGGCGGGCCCGTGGGCCTGAGCTGGACGCCGACGGCGCTCTACGTCGCGTGC GGCAAGGGCCGGCGGCGGCTGGAGGCGGTGCTGCTGCGCGACTCGTGCACGTGCGCCGCCTGCCGCGACCCGTCG TCCGGCAACAAGAAGTACAGCGTGACGGAGCTCGGGGACGGGCTGGCGCTCGAGGCGGTGCAGCCGCGCGAGGAC GGGTTGCTGCTGACGTTCGGCAACGACATCCCGCGGCTGGCCGGGGTCGCGGACGAGAGCGGCGGCGCGGCCAAG CACGAGACGCTGATGCCGGGGCGCCGCGGCTGA |
| Transcript | >Hirsu2|2317 ATGCTGCCTCGTACGATAGGCGCCCTTGCTCGGCCTGCTGCTGCGGCATCGGCGTCGGCCTCGACAGCCGCAGCC GCAGCCGCATATCGCGCCCCCACGGCGGCGGCGCTGCTCCCGAATCTCTGCCAAGGCCGCTCGCACGCCCGCGCC TTCGCGTCCGAGAGCGGGGACGGGCCGGAGCGGCAGGCCGAGCAGAAGCCGACGAGCCCGAGGCCGAAGAAGAAG CAGGCCAAGAAGGCCAAGAATCCGACGAGCAGCCCGTCGCAGCCGGTCAACTACTTCCCGCCGGGCGCGCCGCAC GTCGAGTACGCGACGGAGAGCCTCGGCGGGCCCGTGGGCCTGAGCTGGACGCCGACGGCGCTCTACGTCGCGTGC GGCAAGGGCCGGCGGCGGCTGGAGGCGGTGCTGCTGCGCGACTCGTGCACGTGCGCCGCCTGCCGCGACCCGTCG TCCGGCAACAAGAAGTACAGCGTGACGGAGCTCGGGGACGGGCTGGCGCTCGAGGCGGTGCAGCCGCGCGAGGAC GGGTTGCTGCTGACGTTCGGCAACGACATCCCGCGGCTGGCCGGGGTCGCGGACGAGAGCGGCGGCGCGGCCAAG CACGAGACGCTGATGCCGGGGCGCCGCGGCTGA |
| Gene | >Hirsu2|2317 ATGCTGCCTCGTACGATAGGCGCCCTTGCTCGGCCTGCTGCTGCGGCATCGGCGTCGGCCTCGACAGCCGCAGCC GCAGCCGCATATCGCGCCCCCACGGCGGCGGCGCTGCTCCCGAATCTCTGCCAAGGCCGCTCGCACGCCCGCGCC TTCGCGTCCGAGAGCGGGGACGGGCCGGAGCGGCAGGCCGAGCAGAAGCCGACGAGCCCGAGGCCGAAGAAGAAG CAGGCCAAGAAGGCCAAGAATCCGACGAGCAGCCCGTCGCAGCCGGTCAACTACTTCCCGCCGGGCGCGCCGCAC GTCGAGTACGCGACGGAGAGCCTCGGCGGGCCCGTGGGCCTGAGCTGGACGCCGACGGCGCTCTACGTCGCGTGC GGCAAGGGCCGGCGGCGGCTGGAGGCGGTGCTGCTGCGCGACTCGTGCACGTGCGCCGCCTGCCGCGACCCGTCG TCCGGCAACAAGAAGTACAGCGTGACGGAGCTCGGGGACGGGCTGGCGCTCGAGGCGGTGCAGCCGCGCGAGGAC GGGTTGCTGCTGACGTTCGGCAACGACATCCCGCGGCTGGCCGGGGTCGCGGACGAGAGCGGCGGCGCGGCCAAG CACGAGACGCTGATGCCGTGGGCGACGGTGGCGCGGGCCCTGCGCCGCGAGGGCGCTCGCGAGGGGGCGCCGCGG CTGA |