Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2314
Gene name
LocationContig_1546:4990..5599
Strand+
Gene length (bp)609
Transcript length (bp)609
Coding sequence length (bp)609
Protein length (aa) 203

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.643 0.3703 0.1291 0.3577 0.418 0.0508 0.1367 0.1933 0.2172 0.1206

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup754
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1567
Ophiocordyceps australis map64 (Brazil) OphauB2|1332
Ophiocordyceps camponoti-floridani Ophcf2|00459
Ophiocordyceps camponoti-rufipedis Ophun1|1090
Ophiocordyceps kimflemingae Ophio5|1910
Ophiocordyceps subramaniannii Hirsu2|2313
Ophiocordyceps subramaniannii Hirsu2|2314 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2314
MLQEHDEWSDRLGHANFTITPLPYELEAISAETVGRFRDDWEAARINYTKHLVRTGEHYGHTSKIYALTEAKWAE
TERRWKGIYDDMVRQSSRSAPGSASHSRSHSRGRGRGRSSSSVGYVGRMPSHDDVLADLDWRRMDDCHPGAVPRM
LESLDAHGKFPCRGDEDIVGPMQRDAVMVRARSEDAKGRFWRSLADKVGFRK*
Coding >Hirsu2|2314
ATGCTGCAGGAGCACGACGAGTGGTCCGACCGGCTGGGCCACGCCAACTTCACCATCACGCCGCTGCCGTACGAG
CTCGAGGCCATCTCGGCCGAGACGGTCGGCCGCTTCCGCGACGACTGGGAGGCGGCGCGGATCAACTACACGAAG
CACCTGGTGCGCACCGGCGAGCACTACGGCCACACGAGCAAGATCTACGCCCTGACCGAGGCCAAGTGGGCCGAG
ACGGAGCGGCGGTGGAAGGGCATCTACGACGACATGGTGCGGCAGAGCAGCCGCTCGGCGCCCGGGTCGGCCAGC
CACTCGCGCAGCCACAGCCGGGGCCGCGGGCGCGGCCGCTCCAGCAGCTCCGTCGGCTACGTCGGCCGCATGCCG
TCGCACGACGACGTGCTGGCCGACCTGGACTGGCGGCGCATGGACGACTGCCACCCCGGCGCCGTGCCGCGCATG
CTGGAATCGCTGGACGCGCACGGCAAGTTCCCGTGCCGCGGCGACGAGGACATCGTCGGGCCCATGCAGCGCGAC
GCCGTCATGGTCCGAGCCCGCAGCGAGGACGCCAAGGGGCGCTTCTGGAGGAGCCTGGCCGACAAGGTCGGCTTC
CGCAAGTAG
Transcript >Hirsu2|2314
ATGCTGCAGGAGCACGACGAGTGGTCCGACCGGCTGGGCCACGCCAACTTCACCATCACGCCGCTGCCGTACGAG
CTCGAGGCCATCTCGGCCGAGACGGTCGGCCGCTTCCGCGACGACTGGGAGGCGGCGCGGATCAACTACACGAAG
CACCTGGTGCGCACCGGCGAGCACTACGGCCACACGAGCAAGATCTACGCCCTGACCGAGGCCAAGTGGGCCGAG
ACGGAGCGGCGGTGGAAGGGCATCTACGACGACATGGTGCGGCAGAGCAGCCGCTCGGCGCCCGGGTCGGCCAGC
CACTCGCGCAGCCACAGCCGGGGCCGCGGGCGCGGCCGCTCCAGCAGCTCCGTCGGCTACGTCGGCCGCATGCCG
TCGCACGACGACGTGCTGGCCGACCTGGACTGGCGGCGCATGGACGACTGCCACCCCGGCGCCGTGCCGCGCATG
CTGGAATCGCTGGACGCGCACGGCAAGTTCCCGTGCCGCGGCGACGAGGACATCGTCGGGCCCATGCAGCGCGAC
GCCGTCATGGTCCGAGCCCGCAGCGAGGACGCCAAGGGGCGCTTCTGGAGGAGCCTGGCCGACAAGGTCGGCTTC
CGCAAGTAG
Gene >Hirsu2|2314
ATGCTGCAGGAGCACGACGAGTGGTCCGACCGGCTGGGCCACGCCAACTTCACCATCACGCCGCTGCCGTACGAG
CTCGAGGCCATCTCGGCCGAGACGGTCGGCCGCTTCCGCGACGACTGGGAGGCGGCGCGGATCAACTACACGAAG
CACCTGGTGCGCACCGGCGAGCACTACGGCCACACGAGCAAGATCTACGCCCTGACCGAGGCCAAGTGGGCCGAG
ACGGAGCGGCGGTGGAAGGGCATCTACGACGACATGGTGCGGCAGAGCAGCCGCTCGGCGCCCGGGTCGGCCAGC
CACTCGCGCAGCCACAGCCGGGGCCGCGGGCGCGGCCGCTCCAGCAGCTCCGTCGGCTACGTCGGCCGCATGCCG
TCGCACGACGACGTGCTGGCCGACCTGGACTGGCGGCGCATGGACGACTGCCACCCCGGCGCCGTGCCGCGCATG
CTGGAATCGCTGGACGCGCACGGCAAGTTCCCGTGCCGCGGCGACGAGGACATCGTCGGGCCCATGCAGCGCGAC
GCCGTCATGGTCCGAGCCCGCAGCGAGGACGCCAAGGGGCGCTTCTGGAGGAGCCTGGCCGACAAGGTCGGCTTC
CGCAAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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