Protein ID | Hirsu2|2313 |
Gene name | |
Location | Contig_1546:3700..4629 |
Strand | + |
Gene length (bp) | 929 |
Transcript length (bp) | 810 |
Coding sequence length (bp) | 810 |
Protein length (aa) | 270 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Nuclear localization signal | 0.6614 | 0.4393 | 0.0663 | 0.2517 | 0.1569 | 0.0244 | 0.2143 | 0.2347 | 0.1493 | 0.0916 |
Orthofinder run ID | 4 |
Orthogroup | 754 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2313 MSPKLKPLLLPQLVEERRKIDSQAPQPGPDAADLSSHVYCTTNSSSSDVASPVTPTFSPRALQRFSSSSSSLELP PPPLPPPPPPAPPQDGPTSPTAQYLSAKSEKRQLPDVQEDPMERWEEDACPSPEPFGLYSCLCDTPCQHRNSSEG LFPEDMTDFDIDYDMGFLSDGDFSADPRYPKKKREADGSPFAGLTSRLGSRLPTIKRWRSTRRANPVASPATDLS LENVLSRGPSSRSSSMSASNQQATPDRLPEMPPPASRMPSSSSI* |
Coding | >Hirsu2|2313 ATGTCGCCGAAACTCAAGCCGCTGCTGCTGCCGCAGCTGGTGGAAGAGCGCCGCAAAATCGACAGCCAAGCCCCC CAGCCCGGCCCCGACGCCGCCGACCTGTCGTCGCACGTCTACTGCACCACCAATTCCTCCTCGTCCGATGTCGCC TCCCCCGTCACGCCCACCTTCTCCCCGCGCGCGCTCCAGCGCTTCTCCAGCTCCTCGTCGTCGCTCGAGCTGCCG CCGCCGCCTCTGCCGCCGCCGCCGCCCCCCGCCCCGCCCCAGGACGGCCCGACCTCGCCCACGGCCCAGTACCTG TCGGCCAAGTCGGAGAAGCGCCAGCTGCCCGACGTCCAGGAGGACCCCATGGAGCGCTGGGAGGAGGACGCCTGC CCGTCCCCCGAGCCCTTTGGCCTGTACAGCTGCCTGTGCGACACGCCCTGCCAACACCGCAACAGCTCCGAGGGC CTGTTCCCCGAAGACATGACCGACTTCGACATCGACTACGACATGGGCTTCCTCAGCGACGGCGACTTCTCCGCC GACCCCCGCTACCCCAAGAAGAAGCGCGAGGCCGACGGCTCGCCCTTTGCCGGCCTCACCTCCCGCCTCGGCTCG CGCCTGCCCACCATCAAGCGCTGGAGGTCGACGCGCCGCGCCAACCCCGTCGCCTCGCCCGCCACGGACCTGAGC CTGGAGAACGTGCTGTCGCGCGGGCCCTCGAGCCGCTCCTCGTCCATGTCGGCCTCGAACCAGCAGGCGACGCCC GACCGCCTGCCCGAGATGCCGCCGCCGGCCTCGCGCATGCCGTCCAGCTCGTCCATATGA |
Transcript | >Hirsu2|2313 ATGTCGCCGAAACTCAAGCCGCTGCTGCTGCCGCAGCTGGTGGAAGAGCGCCGCAAAATCGACAGCCAAGCCCCC CAGCCCGGCCCCGACGCCGCCGACCTGTCGTCGCACGTCTACTGCACCACCAATTCCTCCTCGTCCGATGTCGCC TCCCCCGTCACGCCCACCTTCTCCCCGCGCGCGCTCCAGCGCTTCTCCAGCTCCTCGTCGTCGCTCGAGCTGCCG CCGCCGCCTCTGCCGCCGCCGCCGCCCCCCGCCCCGCCCCAGGACGGCCCGACCTCGCCCACGGCCCAGTACCTG TCGGCCAAGTCGGAGAAGCGCCAGCTGCCCGACGTCCAGGAGGACCCCATGGAGCGCTGGGAGGAGGACGCCTGC CCGTCCCCCGAGCCCTTTGGCCTGTACAGCTGCCTGTGCGACACGCCCTGCCAACACCGCAACAGCTCCGAGGGC CTGTTCCCCGAAGACATGACCGACTTCGACATCGACTACGACATGGGCTTCCTCAGCGACGGCGACTTCTCCGCC GACCCCCGCTACCCCAAGAAGAAGCGCGAGGCCGACGGCTCGCCCTTTGCCGGCCTCACCTCCCGCCTCGGCTCG CGCCTGCCCACCATCAAGCGCTGGAGGTCGACGCGCCGCGCCAACCCCGTCGCCTCGCCCGCCACGGACCTGAGC CTGGAGAACGTGCTGTCGCGCGGGCCCTCGAGCCGCTCCTCGTCCATGTCGGCCTCGAACCAGCAGGCGACGCCC GACCGCCTGCCCGAGATGCCGCCGCCGGCCTCGCGCATGCCGTCCAGCTCGTCCATATGA |
Gene | >Hirsu2|2313 ATGTCGCCGAAACTCAAGCCGCTGCTGCTGCCGCAGCTGGTGGAAGAGCGCCGCAAAATCGACAGCCAAGCCCCC CAGCCCGGCCCCGACGCCGCCGACCTGTCGTCGCACGTCTACTGCACCACCAATTCCTCCTCGTCCGATGTCGCC TCCCCCGTCACGCCCACCTTCTCCCCGCGCGCGCTCCAGCGCTTCTCCAGCTCCTCGTCGTCGCTCGAGCTGCCG CCGCCGCCTCTGCCGCCGCCGCCGCCCCCCGCCCCGCCCCAGGACGGCCCGACCTCGCCCACGGCCCAGTACCTG TCGGCCAAGTCGGAGAAGCGCCAGCTGCCCGACGTCCAGGAGGACCCCATGGAGCGCTGGGAGGAGGACGCCTGC CCGTCCCCCGAGCCCTTTGGCCTGTACAGCTGCCTGTGTAAGTGCCGGCGGCCCGACGCCTCGAGGCCGACCGAA CCCGTGCTGACGCTCGCCCCGGGCCGCTGCAGGCGACACGCCCTGCCAACACCGCAACAGCTCCGAGGGCCTGTT CCCCGAAGACATGACCGACTTCGACATCGACTACGACATGGGCTTCCTCAGCGACGGCGACTTCTCCGCCGACCC CCGCTACCCCAAGAAGAAGCGCGAGGCCGACGGCTCGCCCTTTGCCGGCCTCACCTCCCGCCTCGGCTCGCGCCT GCCCACCATCAAGCGCTGGAGGTCGACGCGCCGCGCCAACCCCGTCGCCTCGCCCGCCACGGACCTGAGCCTGGA GAACGTGCTGTCGCGCGGGCCCTCGAGCCGCTCCTCGTCCATGTCGGCCTCGAACCAGCAGGCGACGCCCGACCG CCTGCCCGAGATGCCGCCGCCGGCCTCGCGCATGCCGTCCAGCTCGTCCATGTCCTACTACGGCAGCACCGAGAA CCTGAGCCGGTCCTCGGTCCTCGAGATGA |