Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Hirsu2|2310
Gene name
Location	Contig_1545:133..2861
Strand	+
Gene length (bp)	2728
Transcript length (bp)	2508
Coding sequence length (bp)	2508
Protein length (aa)	836

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08314	Sec39	Secretory pathway protein Sec39	5.4E-209	12	784

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|O14266|SEC39_SCHPO	Protein transport protein sec39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec39 PE=3 SV=1	483	687	4.0E-10

GO

GO Term	Description	Terminal node
GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	Yes
GO:0048193	Golgi vesicle transport	No
GO:0016192	vesicle-mediated transport	No
GO:0051179	localization	No
GO:0008150	biological_process	No
GO:0051234	establishment of localization	No
GO:0006810	transport	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2|2310 MGNSLTPTKIALLAAHLAVYADVNGLRWLISEHSATFSKALLLRILLTYLPETLQPGAYLLLLKDISVNDIAKCH RSEPDISWINALSDHQALRRARKLRLARLRCLNTAQDQFDLLSTFLVQKAFRIDSEAGVLSYVPDFLVPLLHHSP ALSTRIVATVLPFARRNVQYYLEIAPAHSLVQFQSLAGPDAVDYLLSRSGGPKFAQSSVVRDLRGLIGPWLCDSA RWESAAGDQMAPVGESRSSFCSGWEQTLSWLTTQAKLSWDETVGVIEHWDGPADIDLGPGIKPQLSDEKQRYLDH TYASALLGMAYCMQDATLESLSGAYRVCAKARLLLGHGQGDLSLRDVLLQESLPDMSTVDTTVGAKAIGLIRRFS QQSWNNCSVAVDQSITDLLMALITSALVLSRLGMPYTVRKVGDLAFAQDDLEQKAEVAKLLHAISSSAHQDHDEH WIKCRRDILWLRDWGRTTNPATATTATAVLGAVSKEFLESELLKALLSRSRYNLARALFEERAETILAPTRIREL VLQAALHAFDNASELDRTRGGLKRCGDIIRAFPVTVGDSSPGPQRIWALLRAIHILSRYQVVVQPGEPFSPVVLR AHPDPIEIINKILQQNPKAYTRLQEFLEMGIDIIQAGLLPHTRADQVHLGSDTHLYIAGQRITAMCVEAALKEDD FETAYSYVVSRLGLHSLQDPRSCYDKWSWAAASRAGQHVLDARSEQPTHLSNAGGDIEIRHLEQRLECLATSLRL APTSQVHDILKAFRRCEEQFDSAVMGEMIKEAAWDATHKATVCATARQAEEYHCSLQFAKIRFSGRASQFRAYPA GTEDQEKRPT*
Coding	>Hirsu2|2310 ATGGGCAATTCGCTGACTCCTACCAAGATAGCACTCTTGGCTGCACACTTAGCTGTTTATGCTGATGTGAATGGC CTTCGCTGGCTAATTAGCGAGCATTCGGCTACCTTTTCCAAGGCTTTGCTCCTACGCATTTTGCTCACGTACCTG CCGGAGACATTACAACCGGGTGCATACTTATTGCTCCTGAAGGACATCTCTGTCAATGACATCGCCAAGTGCCAT CGGTCTGAGCCTGATATTTCTTGGATCAACGCCCTGTCTGATCACCAGGCATTGCGGAGGGCCAGGAAGCTACGA CTCGCTCGTCTCAGGTGTCTCAATACTGCGCAGGACCAATTTGATCTGCTTAGCACGTTTCTGGTCCAAAAAGCG TTCCGAATAGACTCGGAAGCAGGAGTGCTGTCCTACGTCCCTGACTTTCTGGTCCCTCTTCTTCATCATTCCCCC GCGCTGTCCACACGTATCGTTGCGACGGTTTTGCCGTTTGCGAGGAGGAATGTGCAATACTACCTTGAGATTGCA CCAGCTCACTCACTCGTTCAGTTTCAGAGCCTGGCTGGACCAGATGCCGTGGACTATCTTCTGTCTCGCAGTGGC GGGCCTAAATTTGCTCAGAGCTCTGTCGTTCGGGACCTCAGAGGGCTCATAGGACCGTGGCTGTGTGACAGCGCC CGTTGGGAGTCAGCGGCTGGAGATCAGATGGCTCCCGTTGGGGAATCACGGTCCTCTTTTTGCTCCGGCTGGGAA CAGACTTTGAGCTGGCTTACGACCCAGGCCAAATTATCATGGGATGAGACAGTCGGTGTAATCGAACATTGGGAT GGGCCGGCTGACATTGATCTTGGCCCCGGAATCAAACCGCAGCTGTCCGACGAAAAACAGCGGTATCTGGATCAT ACCTATGCCAGCGCATTGCTCGGGATGGCGTACTGTATGCAAGACGCAACACTGGAGTCGTTAAGTGGTGCCTAT CGAGTATGTGCCAAGGCTAGATTGCTCCTAGGCCACGGTCAGGGCGACTTGTCGCTGCGAGATGTTCTCCTCCAG GAGTCTTTACCGGACATGTCGACTGTCGACACAACAGTCGGAGCAAAAGCAATTGGCCTTATAAGAAGATTTTCG CAACAGTCTTGGAACAACTGCTCGGTTGCAGTCGACCAATCCATAACTGACCTGTTGATGGCACTCATTACCAGC GCCCTCGTTTTGAGCCGTCTGGGCATGCCCTACACAGTCAGGAAAGTCGGTGATCTTGCGTTTGCTCAAGACGAC CTGGAGCAAAAGGCTGAGGTTGCGAAACTTCTACACGCTATATCGAGTAGTGCACATCAGGACCACGATGAACAC TGGATAAAATGTCGCCGTGATATTCTCTGGCTCCGTGACTGGGGCAGGACTACCAACCCTGCGACCGCTACCACT GCCACAGCTGTATTAGGGGCGGTCTCGAAGGAGTTTTTGGAAAGTGAGCTTCTGAAAGCGTTGCTCTCTCGATCG CGCTACAACCTCGCCAGGGCGCTATTCGAGGAAAGGGCGGAAACAATCCTCGCTCCCACTCGTATCCGGGAGTTA GTTCTCCAAGCAGCCCTCCATGCATTCGATAATGCGTCTGAACTTGATCGCACACGAGGCGGCTTGAAAAGATGT GGTGACATCATCCGGGCCTTTCCAGTTACTGTGGGCGACTCTTCTCCGGGTCCACAACGGATATGGGCACTCCTC CGAGCGATACACATATTGAGCAGGTATCAGGTCGTAGTCCAGCCGGGCGAGCCTTTCAGCCCTGTGGTCCTGCGT GCTCACCCCGATCCTATTGAGATTATCAACAAAATTTTGCAGCAGAATCCCAAAGCATACACCCGCCTGCAAGAA TTCTTGGAAATGGGCATCGACATCATCCAGGCTGGGCTCCTTCCGCATACCCGAGCTGACCAAGTGCACCTAGGT TCAGACACACATCTTTACATAGCCGGTCAACGCATCACCGCCATGTGTGTCGAAGCCGCCTTGAAGGAAGATGAT TTCGAGACGGCGTATTCATATGTAGTCAGCCGCCTAGGATTGCATAGTCTTCAAGATCCCAGGAGCTGTTACGAT AAATGGTCTTGGGCAGCAGCTTCGAGAGCAGGACAACACGTCCTAGACGCGCGGTCTGAACAGCCCACCCATCTC AGCAATGCTGGTGGAGACATTGAGATTCGACATTTGGAGCAACGGTTGGAGTGCCTGGCCACATCTCTCAGACTG GCGCCCACTTCTCAGGTCCATGATATTCTCAAAGCTTTCCGGCGCTGTGAGGAGCAATTTGACTCAGCCGTGATG GGGGAAATGATCAAGGAAGCTGCTTGGGACGCCACGCATAAAGCCACTGTCTGTGCTACCGCTCGACAGGCGGAG GAATATCACTGCTCTCTCCAGTTTGCAAAGATCAGATTTTCCGGAAGGGCCAGCCAGTTTAGAGCCTATCCAGCC GGAACCGAAGACCAGGAAAAAAGACCGACTTAG
Transcript	>Hirsu2|2310 ATGGGCAATTCGCTGACTCCTACCAAGATAGCACTCTTGGCTGCACACTTAGCTGTTTATGCTGATGTGAATGGC CTTCGCTGGCTAATTAGCGAGCATTCGGCTACCTTTTCCAAGGCTTTGCTCCTACGCATTTTGCTCACGTACCTG CCGGAGACATTACAACCGGGTGCATACTTATTGCTCCTGAAGGACATCTCTGTCAATGACATCGCCAAGTGCCAT CGGTCTGAGCCTGATATTTCTTGGATCAACGCCCTGTCTGATCACCAGGCATTGCGGAGGGCCAGGAAGCTACGA CTCGCTCGTCTCAGGTGTCTCAATACTGCGCAGGACCAATTTGATCTGCTTAGCACGTTTCTGGTCCAAAAAGCG TTCCGAATAGACTCGGAAGCAGGAGTGCTGTCCTACGTCCCTGACTTTCTGGTCCCTCTTCTTCATCATTCCCCC GCGCTGTCCACACGTATCGTTGCGACGGTTTTGCCGTTTGCGAGGAGGAATGTGCAATACTACCTTGAGATTGCA CCAGCTCACTCACTCGTTCAGTTTCAGAGCCTGGCTGGACCAGATGCCGTGGACTATCTTCTGTCTCGCAGTGGC GGGCCTAAATTTGCTCAGAGCTCTGTCGTTCGGGACCTCAGAGGGCTCATAGGACCGTGGCTGTGTGACAGCGCC CGTTGGGAGTCAGCGGCTGGAGATCAGATGGCTCCCGTTGGGGAATCACGGTCCTCTTTTTGCTCCGGCTGGGAA CAGACTTTGAGCTGGCTTACGACCCAGGCCAAATTATCATGGGATGAGACAGTCGGTGTAATCGAACATTGGGAT GGGCCGGCTGACATTGATCTTGGCCCCGGAATCAAACCGCAGCTGTCCGACGAAAAACAGCGGTATCTGGATCAT ACCTATGCCAGCGCATTGCTCGGGATGGCGTACTGTATGCAAGACGCAACACTGGAGTCGTTAAGTGGTGCCTAT CGAGTATGTGCCAAGGCTAGATTGCTCCTAGGCCACGGTCAGGGCGACTTGTCGCTGCGAGATGTTCTCCTCCAG GAGTCTTTACCGGACATGTCGACTGTCGACACAACAGTCGGAGCAAAAGCAATTGGCCTTATAAGAAGATTTTCG CAACAGTCTTGGAACAACTGCTCGGTTGCAGTCGACCAATCCATAACTGACCTGTTGATGGCACTCATTACCAGC GCCCTCGTTTTGAGCCGTCTGGGCATGCCCTACACAGTCAGGAAAGTCGGTGATCTTGCGTTTGCTCAAGACGAC CTGGAGCAAAAGGCTGAGGTTGCGAAACTTCTACACGCTATATCGAGTAGTGCACATCAGGACCACGATGAACAC TGGATAAAATGTCGCCGTGATATTCTCTGGCTCCGTGACTGGGGCAGGACTACCAACCCTGCGACCGCTACCACT GCCACAGCTGTATTAGGGGCGGTCTCGAAGGAGTTTTTGGAAAGTGAGCTTCTGAAAGCGTTGCTCTCTCGATCG CGCTACAACCTCGCCAGGGCGCTATTCGAGGAAAGGGCGGAAACAATCCTCGCTCCCACTCGTATCCGGGAGTTA GTTCTCCAAGCAGCCCTCCATGCATTCGATAATGCGTCTGAACTTGATCGCACACGAGGCGGCTTGAAAAGATGT GGTGACATCATCCGGGCCTTTCCAGTTACTGTGGGCGACTCTTCTCCGGGTCCACAACGGATATGGGCACTCCTC CGAGCGATACACATATTGAGCAGGTATCAGGTCGTAGTCCAGCCGGGCGAGCCTTTCAGCCCTGTGGTCCTGCGT GCTCACCCCGATCCTATTGAGATTATCAACAAAATTTTGCAGCAGAATCCCAAAGCATACACCCGCCTGCAAGAA TTCTTGGAAATGGGCATCGACATCATCCAGGCTGGGCTCCTTCCGCATACCCGAGCTGACCAAGTGCACCTAGGT TCAGACACACATCTTTACATAGCCGGTCAACGCATCACCGCCATGTGTGTCGAAGCCGCCTTGAAGGAAGATGAT TTCGAGACGGCGTATTCATATGTAGTCAGCCGCCTAGGATTGCATAGTCTTCAAGATCCCAGGAGCTGTTACGAT AAATGGTCTTGGGCAGCAGCTTCGAGAGCAGGACAACACGTCCTAGACGCGCGGTCTGAACAGCCCACCCATCTC AGCAATGCTGGTGGAGACATTGAGATTCGACATTTGGAGCAACGGTTGGAGTGCCTGGCCACATCTCTCAGACTG GCGCCCACTTCTCAGGTCCATGATATTCTCAAAGCTTTCCGGCGCTGTGAGGAGCAATTTGACTCAGCCGTGATG GGGGAAATGATCAAGGAAGCTGCTTGGGACGCCACGCATAAAGCCACTGTCTGTGCTACCGCTCGACAGGCGGAG GAATATCACTGCTCTCTCCAGTTTGCAAAGATCAGATTTTCCGGAAGGGCCAGCCAGTTTAGAGCCTATCCAGCC GGAACCGAAGACCAGGAAAAAAGACCGACTTAG
Gene	>Hirsu2|2310 ATGGGCAATTCGCTGACTCCTACCAAGATAGCACTCTTGGCTGCACACTTAGCTGTTTATGCTGATGTGAATGGC CTTCGCTGGCTAATTAGCGAGCATTCGGCTACCTTTTCCAAGGCTTTGCTCCTACGCATTTTGCTCACGTACCTG CCGGAGACATTACAACCGGGTGCATACTTATTGCTCCTGAAGGACATCTCTGTCAATGACATCGCCAAGTGCCAT CGGTCTGAGCCTGATATTTCTTGGATCAACGCCCTGTCTGATCACCAGGCATTGCGGAGGGCCAGGAAGCTACGA CTCGCTCGTCTCAGGTGTCTCAATACTGCGCAGGACCAATTTGATCTGCTTAGCACGTTTCTGGTCCAAAAAGCG TTCCGAATAGACTCGGAAGCAGGAGTGCTGTCCTACGTCCCTGACTTTCTGGTCCCTCTTCTTCATCATTCCCCC GCGCTGTCCACACGTATCGTTGCGACGGTTTTGCCGTTTGCGAGGAGGAATGTGCAATACTACCTTGAGATTGCA CCAGCTCACTCACTCGTTCAGTTTCAGAGCCTGGCTGGACCAGATGCCGTGGACTATCTTCTGTCTCGCAGTGGC GGGCCTAAATTTGCTCAGAGCTCTGTCGTTCGGGACCTCAGAGGGCTCATAGGACCGTGGCTGTGTGACAGCGCC CGTTGGGAGTCAGCGGCTGGAGATCAGATGGCTCCCGTTGGGGAATCACGGTCCTCTTTTTGCTCCGGCTGGGAA CAGACTTTGAGCTGGCTTACGACCCAGGCCAAATTATCATGGGATGAGACAGTCGGTGTAATCGAACATTGGGAT GGGCCGGCTGACATTGATCTTGGCCCCGGAATCAAACCGCAGCTGTCCGACGAAAAACAGCGGTATCTGGATCAT ACCTATGCCAGCGCATTGCTCGGGATGGCGTACTGTATGCAAGACGCAACACTGGAGTCGTTAAGTGGTGCCTAT CGAGTATGTGCCAAGGCTAGATTGCTCCTAGGCCACGGTCAGGGCGACTTGTCGCTGCGAGATGTTCTCCTCCAG GAGTCTTTACCGGACATGTCGACTGTCGACACAACAGTCGGAGCAAAAGCAATTGGCCTTATAAGAAGATTTTCG CAACAGTCTTGGAACAACTGCTCGGTTGCAGTCGACCAATCCATAACTGACCTGTTGATGGCACTCATTACCAGC GCCCTCGTTTTGAGCCGTCTGGGCATGCCCTACACAGTCAGGAAAGTCGGTGATCTTGCGTTTGCTCAAGACGAC CTGGAGCAAAAGGCTGAGGTTGCGAAACTTCTACACGCTATATCGAGTAGTGCACATCAGGACCACGATGAACAC TGGATAAAATGTCGCCGTGATATTCTCTGGCTCCGTGACTGGGGCAGGACTACCAACCCTGCGACCGCTACCACT GCCACAGCTGTATTAGGGGCGGTCTCGAAGGAGTTTTTGGAAAGTGAGCTTCTGAAAGCGTTGCTCTCTCGATCG CGTATGTATTACCCTGGCAATCTATTCAGCTGCGTCTTCTCATAGAAGGCAGGCTACAACCTCGCCAGGGCGCTA TTCGAGGAAAGGGCGGAAACAATCCTCGCTCCCACTCGTATCCGGGAGTTAGTTCTCCAAGCAGCCCTCCATGCA TTCGATAATGCGTCTGAACTTGATCGCACACGAGGCGGCTTGAAAAGATGTGGTGACATGTACCAGCACTCCGCA CTCGAGCCGCCAATGACATCAACTGATGATTGCTCATTAGCATCCGGGCCTTTCCAGTTACTGTGGGCGACTCTT CTCCGGGTCCACAACGGATATGGGCACTCCTCCGAGCGATACACATATTGAGCAGGTATCAGGTCGTAGTCCAGC CGGGCGAGCCTTTCAGCCCTGTGGTCCTGCGTGCTCACCCCGATCCTATTGAGATTATCAACAAAATTTTGCAGC AGAATCCCAAAGCATACACCCGCCTGCAAGAATTCTTGGAAATGGGCATCGACATCATCCAGGCTGGGCTCCTTC CGCATACCCGAGCTGACCAAGTGCACCTAGGTTCAGACACACATCTTTACATAGCCGGTCAACGCATCACCGCCA TGTGTGTCGAAGCCGCCTTGAAGGAAGATGATTTCGAGACGGCGTATTCATATGTAGTCAGCCGCCTAGGATTGC ATAGTCTTCAAGATCCCAGGAGCTGTTACGATAAATGGTCTTGGGCAGCAGCTTCGAGAGCAGGACAACACGTCC TAGACGCGCGGTCTGAACAGCCCACCCATCTCAGCAATGCTGGTGGAGACATTGAGATTCGACATTTGGAGCAAC GGTTGGAGTGCCTGGCCACATCTCTCAGACTGGCGCCCACTTCTCAGGTCCATGATATTCTCAAAGCTTTCCGGC GCTGTGAGGAGCAATTTGACTCAGCCGTGATGGGGGAAATGATCAAGGAAGCTGCTTGGGACGCCACGCATAAAG CCAGTAATATACCCGGCACTGTTCACACAGCACTCGGCACATGCTCACCTTGCAACACAGCTGTCTGTGCTACCG CTCGACAGGCGGAGGTGGTGCCCATGTCAATTTTTGATCTTTCCCGAACAACAGCTAAAATCACACAAAGGAATA TCACTGCTCTCTCCAGTTTGCAAAGATCAGATTTTCCGGAAGGGCCAGCCAGTTTAGAGCCTATCCAGCCGGAAC CGAAGACCAGGAAAAAAGACCGACTTAG