Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2308
Gene name
LocationContig_1543:3837..5218
Strand-
Gene length (bp)1381
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 62 81 19
3 105 127 22
4 147 169 22
5 200 222 22
6 229 251 22
7 261 283 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2308
MDASSSQKAPAANPNPSQLSPSVSQTALLAVLWTGTTISLLTVAARLAIRWRLLAKFKTDDYLVMFAMVTYATST
ITLTAARENLVPYLRINIIDVTKLPDVLAAAAVGLHANLASYICSWTCLWAIKLSFMAFFHALGRQIRFQRIIWW
SILFLILATYIVCISILDYGCLTGTADIIMEKCMSQKTVDYEYANTRVTTTFDIVTDLSIVGLSANIVWRAGIPL
RKKLMLACICSLTVFMVVVAIVRITVGAPGKAPDLSWLLLWNSVEMTLAIFVACIASFRSLYCQTRRPHRASDGT
PPHPRKKTSARTAFLSTLNTGTLFEEETTQWFRQGLTEAGEPRFGPDTSGVKIIALSDVSDSNHV*
Coding >Hirsu2|2308
ATGGATGCCTCCTCCTCGCAGAAAGCCCCGGCCGCGAACCCCAATCCCTCCCAACTGTCGCCCTCCGTCTCCCAG
ACGGCTCTTCTCGCAGTCTTATGGACCGGCACCACCATCTCCCTGCTCACCGTCGCCGCACGGCTGGCCATCCGC
TGGAGGCTGCTGGCCAAGTTCAAGACGGACGACTACCTGGTCATGTTTGCCATGGTGACGTACGCGACGTCGACC
ATCACCCTGACGGCCGCGCGTGAAAACCTCGTGCCGTACCTCAGAATCAACATCATCGACGTGACCAAGCTGCCG
GACGTGCTGGCCGCGGCCGCCGTCGGCCTGCACGCCAACCTGGCCAGCTACATCTGCTCGTGGACCTGCCTGTGG
GCCATCAAGCTGTCCTTCATGGCCTTCTTCCACGCGCTCGGCCGCCAGATCCGGTTCCAGAGAATCATCTGGTGG
TCCATCCTTTTCCTCATCCTGGCAACCTACATCGTCTGCATCTCCATCCTCGACTACGGCTGCTTGACCGGCACC
GCCGACATCATCATGGAGAAGTGCATGAGCCAGAAAACGGTCGACTACGAATATGCCAACACCCGAGTCACGACC
ACTTTCGACATCGTCACCGACCTCTCGATTGTTGGCCTGTCAGCCAACATTGTCTGGCGAGCGGGCATCCCGCTG
AGGAAGAAGCTGATGCTGGCCTGCATCTGCTCCCTCACCGTCTTCATGGTCGTCGTCGCCATCGTCAGGATCACC
GTCGGGGCGCCGGGCAAGGCCCCCGACCTTTCGTGGCTGCTGCTATGGAACTCGGTCGAGATGACGCTCGCCATC
TTCGTGGCCTGCATCGCCTCCTTCCGGAGCCTCTACTGCCAGACGAGGAGGCCTCACCGGGCAAGCGACGGCACG
CCGCCTCATCCCAGGAAGAAGACGTCGGCACGCACCGCCTTCCTCTCCACCCTCAACACCGGCACCTTGTTCGAG
GAAGAAACGACGCAGTGGTTCCGCCAAGGGCTGACGGAAGCCGGAGAGCCTCGCTTTGGCCCCGACACGAGCGGC
GTCAAGATCATTGCGCTGTCCGATGTCTCTGACAGCAACCACGTGTGA
Transcript >Hirsu2|2308
ATGGATGCCTCCTCCTCGCAGAAAGCCCCGGCCGCGAACCCCAATCCCTCCCAACTGTCGCCCTCCGTCTCCCAG
ACGGCTCTTCTCGCAGTCTTATGGACCGGCACCACCATCTCCCTGCTCACCGTCGCCGCACGGCTGGCCATCCGC
TGGAGGCTGCTGGCCAAGTTCAAGACGGACGACTACCTGGTCATGTTTGCCATGGTGACGTACGCGACGTCGACC
ATCACCCTGACGGCCGCGCGTGAAAACCTCGTGCCGTACCTCAGAATCAACATCATCGACGTGACCAAGCTGCCG
GACGTGCTGGCCGCGGCCGCCGTCGGCCTGCACGCCAACCTGGCCAGCTACATCTGCTCGTGGACCTGCCTGTGG
GCCATCAAGCTGTCCTTCATGGCCTTCTTCCACGCGCTCGGCCGCCAGATCCGGTTCCAGAGAATCATCTGGTGG
TCCATCCTTTTCCTCATCCTGGCAACCTACATCGTCTGCATCTCCATCCTCGACTACGGCTGCTTGACCGGCACC
GCCGACATCATCATGGAGAAGTGCATGAGCCAGAAAACGGTCGACTACGAATATGCCAACACCCGAGTCACGACC
ACTTTCGACATCGTCACCGACCTCTCGATTGTTGGCCTGTCAGCCAACATTGTCTGGCGAGCGGGCATCCCGCTG
AGGAAGAAGCTGATGCTGGCCTGCATCTGCTCCCTCACCGTCTTCATGGTCGTCGTCGCCATCGTCAGGATCACC
GTCGGGGCGCCGGGCAAGGCCCCCGACCTTTCGTGGCTGCTGCTATGGAACTCGGTCGAGATGACGCTCGCCATC
TTCGTGGCCTGCATCGCCTCCTTCCGGAGCCTCTACTGCCAGACGAGGAGGCCTCACCGGGCAAGCGACGGCACG
CCGCCTCATCCCAGGAAGAAGACGTCGGCACGCACCGCCTTCCTCTCCACCCTCAACACCGGCACCTTGTTCGAG
GAAGAAACGACGCAGTGGTTCCGCCAAGGGCTGACGGAAGCCGGAGAGCCTCGCTTTGGCCCCGACACGAGCGGC
GTCAAGATCATTGCGCTGTCCGATGTCTCTGACAGCAACCACGTGTGA
Gene >Hirsu2|2308
ATGGATGCCTCCTCCTCGCAGAAAGCCCCGGCCGCGAACCCCAATCCCTCCCAACTGTCGCCCTCCGTCTCCCAG
ACGGCTCTTCTCGTGAGAACTTCCCCTTGCCACTGGCCGCGCTCGAAGGCTGACAGCGGGAGAGGGGGCGTCTCC
AAGGCAGTCTTATGGACCGGCACCACCATCTCCCTGCTCACCGTCGCCGCACGGCTGGCCATCCGCTGGAGGCTG
CTGGCCAAGTTCAAGACGGACGACTACCTGGTCATGTTTGCCATGGTGACGTACGCGACGTCGACCATCACCCTG
ACGGCCGCGCGTGAAAACCTCGTGCCGTACCTCAGAATCAACATCATCGACGTGACCAAGCTGCCGGACGTGCTG
GCCGCGGCCGCCGTCGGCCTGCACGCCAACCTGGCCAGCTACATCTGCTCGTGGACCTGCCTGTGGGCCATCAAG
CTGTCCTTCATGGCCTTCTTCCACGCGCTCGGCCGCCAGATCCGGTTCCAGAGAATCATCTGGTGGTCCATCCTT
TTCCTCATCCTGGCAACCTACATCGTCTGCATCTCCATCCTCGACTACGGCTGCTTGACCGGCACCGCCGACATC
ATCATGGGTATGTGGGCTATGCCGCCTCCGCAGACAGCTGCCATTGATACTGCCGCCGCTCGAGCACGGTCCGTT
GGCTGATGGGCGCCGCAGAGAAGTGCATGAGCCAGAAAACGGTCGACTACGAATATGCCAACACCCGAGTCACGA
CCACTTTCGACATCGTCACCGACCTCTCGAGTGAGACCGTCCCACGGCTTTACCCCCTGAAGCACACTCTGACCT
GACGATGCAGTTGTTGGCCTGTCAGCCAACATTGTCTGGCGAGCGGGCATCCCGCTGAGGAAGAAGCTGATGCTG
GCCTGCATCTGCTCCCTCACCGTCTTCATGGTCGTCGTCGCCATCGTCAGGATCACCGTCGGGGCGCCGGGCAAG
GCCCCCGACCTTTCGTGGCTGCTGCTATGGAACTCGGTCGAGATGACGCTCGGTACCTGGCCCCCGTGCTCTCCC
TCCTCCCTCCGACAAGGTGACCGCTGACGGAGAGGCCGCTGTGGTTACGAAAGCCATCTTCGTGGCCTGCATCGC
CTCCTTCCGGAGCCTCTACTGCCAGACGAGGAGGCCTCACCGGGCAAGCGACGGCACGCCGCCTCATCCCAGGAA
GAAGACGTCGGCACGCACCGCCTTCCTCTCCACCCTCAACACCGGCACCTTGTTCGAGGAAGAAACGACGCAGTG
GTTCCGCCAAGGGCTGACGGAAGCCGGAGAGCCTCGCTTTGGCCCCGACACGAGCGGCGTCAAGATCATTGCGCT
GTCCGATGTCTCTGACAGCAACCACGTGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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