Protein ID | Hirsu2|2308 |
Gene name | |
Location | Contig_1543:3837..5218 |
Strand | - |
Gene length (bp) | 1381 |
Transcript length (bp) | 1098 |
Coding sequence length (bp) | 1098 |
Protein length (aa) | 366 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 27 | 49 | 22 |
2 | 62 | 81 | 19 |
3 | 105 | 127 | 22 |
4 | 147 | 169 | 22 |
5 | 200 | 222 | 22 |
6 | 229 | 251 | 22 |
7 | 261 | 283 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2308 MDASSSQKAPAANPNPSQLSPSVSQTALLAVLWTGTTISLLTVAARLAIRWRLLAKFKTDDYLVMFAMVTYATST ITLTAARENLVPYLRINIIDVTKLPDVLAAAAVGLHANLASYICSWTCLWAIKLSFMAFFHALGRQIRFQRIIWW SILFLILATYIVCISILDYGCLTGTADIIMEKCMSQKTVDYEYANTRVTTTFDIVTDLSIVGLSANIVWRAGIPL RKKLMLACICSLTVFMVVVAIVRITVGAPGKAPDLSWLLLWNSVEMTLAIFVACIASFRSLYCQTRRPHRASDGT PPHPRKKTSARTAFLSTLNTGTLFEEETTQWFRQGLTEAGEPRFGPDTSGVKIIALSDVSDSNHV* |
Coding | >Hirsu2|2308 ATGGATGCCTCCTCCTCGCAGAAAGCCCCGGCCGCGAACCCCAATCCCTCCCAACTGTCGCCCTCCGTCTCCCAG ACGGCTCTTCTCGCAGTCTTATGGACCGGCACCACCATCTCCCTGCTCACCGTCGCCGCACGGCTGGCCATCCGC TGGAGGCTGCTGGCCAAGTTCAAGACGGACGACTACCTGGTCATGTTTGCCATGGTGACGTACGCGACGTCGACC ATCACCCTGACGGCCGCGCGTGAAAACCTCGTGCCGTACCTCAGAATCAACATCATCGACGTGACCAAGCTGCCG GACGTGCTGGCCGCGGCCGCCGTCGGCCTGCACGCCAACCTGGCCAGCTACATCTGCTCGTGGACCTGCCTGTGG GCCATCAAGCTGTCCTTCATGGCCTTCTTCCACGCGCTCGGCCGCCAGATCCGGTTCCAGAGAATCATCTGGTGG TCCATCCTTTTCCTCATCCTGGCAACCTACATCGTCTGCATCTCCATCCTCGACTACGGCTGCTTGACCGGCACC GCCGACATCATCATGGAGAAGTGCATGAGCCAGAAAACGGTCGACTACGAATATGCCAACACCCGAGTCACGACC ACTTTCGACATCGTCACCGACCTCTCGATTGTTGGCCTGTCAGCCAACATTGTCTGGCGAGCGGGCATCCCGCTG AGGAAGAAGCTGATGCTGGCCTGCATCTGCTCCCTCACCGTCTTCATGGTCGTCGTCGCCATCGTCAGGATCACC GTCGGGGCGCCGGGCAAGGCCCCCGACCTTTCGTGGCTGCTGCTATGGAACTCGGTCGAGATGACGCTCGCCATC TTCGTGGCCTGCATCGCCTCCTTCCGGAGCCTCTACTGCCAGACGAGGAGGCCTCACCGGGCAAGCGACGGCACG CCGCCTCATCCCAGGAAGAAGACGTCGGCACGCACCGCCTTCCTCTCCACCCTCAACACCGGCACCTTGTTCGAG GAAGAAACGACGCAGTGGTTCCGCCAAGGGCTGACGGAAGCCGGAGAGCCTCGCTTTGGCCCCGACACGAGCGGC GTCAAGATCATTGCGCTGTCCGATGTCTCTGACAGCAACCACGTGTGA |
Transcript | >Hirsu2|2308 ATGGATGCCTCCTCCTCGCAGAAAGCCCCGGCCGCGAACCCCAATCCCTCCCAACTGTCGCCCTCCGTCTCCCAG ACGGCTCTTCTCGCAGTCTTATGGACCGGCACCACCATCTCCCTGCTCACCGTCGCCGCACGGCTGGCCATCCGC TGGAGGCTGCTGGCCAAGTTCAAGACGGACGACTACCTGGTCATGTTTGCCATGGTGACGTACGCGACGTCGACC ATCACCCTGACGGCCGCGCGTGAAAACCTCGTGCCGTACCTCAGAATCAACATCATCGACGTGACCAAGCTGCCG GACGTGCTGGCCGCGGCCGCCGTCGGCCTGCACGCCAACCTGGCCAGCTACATCTGCTCGTGGACCTGCCTGTGG GCCATCAAGCTGTCCTTCATGGCCTTCTTCCACGCGCTCGGCCGCCAGATCCGGTTCCAGAGAATCATCTGGTGG TCCATCCTTTTCCTCATCCTGGCAACCTACATCGTCTGCATCTCCATCCTCGACTACGGCTGCTTGACCGGCACC GCCGACATCATCATGGAGAAGTGCATGAGCCAGAAAACGGTCGACTACGAATATGCCAACACCCGAGTCACGACC ACTTTCGACATCGTCACCGACCTCTCGATTGTTGGCCTGTCAGCCAACATTGTCTGGCGAGCGGGCATCCCGCTG AGGAAGAAGCTGATGCTGGCCTGCATCTGCTCCCTCACCGTCTTCATGGTCGTCGTCGCCATCGTCAGGATCACC GTCGGGGCGCCGGGCAAGGCCCCCGACCTTTCGTGGCTGCTGCTATGGAACTCGGTCGAGATGACGCTCGCCATC TTCGTGGCCTGCATCGCCTCCTTCCGGAGCCTCTACTGCCAGACGAGGAGGCCTCACCGGGCAAGCGACGGCACG CCGCCTCATCCCAGGAAGAAGACGTCGGCACGCACCGCCTTCCTCTCCACCCTCAACACCGGCACCTTGTTCGAG GAAGAAACGACGCAGTGGTTCCGCCAAGGGCTGACGGAAGCCGGAGAGCCTCGCTTTGGCCCCGACACGAGCGGC GTCAAGATCATTGCGCTGTCCGATGTCTCTGACAGCAACCACGTGTGA |
Gene | >Hirsu2|2308 ATGGATGCCTCCTCCTCGCAGAAAGCCCCGGCCGCGAACCCCAATCCCTCCCAACTGTCGCCCTCCGTCTCCCAG ACGGCTCTTCTCGTGAGAACTTCCCCTTGCCACTGGCCGCGCTCGAAGGCTGACAGCGGGAGAGGGGGCGTCTCC AAGGCAGTCTTATGGACCGGCACCACCATCTCCCTGCTCACCGTCGCCGCACGGCTGGCCATCCGCTGGAGGCTG CTGGCCAAGTTCAAGACGGACGACTACCTGGTCATGTTTGCCATGGTGACGTACGCGACGTCGACCATCACCCTG ACGGCCGCGCGTGAAAACCTCGTGCCGTACCTCAGAATCAACATCATCGACGTGACCAAGCTGCCGGACGTGCTG GCCGCGGCCGCCGTCGGCCTGCACGCCAACCTGGCCAGCTACATCTGCTCGTGGACCTGCCTGTGGGCCATCAAG CTGTCCTTCATGGCCTTCTTCCACGCGCTCGGCCGCCAGATCCGGTTCCAGAGAATCATCTGGTGGTCCATCCTT TTCCTCATCCTGGCAACCTACATCGTCTGCATCTCCATCCTCGACTACGGCTGCTTGACCGGCACCGCCGACATC ATCATGGGTATGTGGGCTATGCCGCCTCCGCAGACAGCTGCCATTGATACTGCCGCCGCTCGAGCACGGTCCGTT GGCTGATGGGCGCCGCAGAGAAGTGCATGAGCCAGAAAACGGTCGACTACGAATATGCCAACACCCGAGTCACGA CCACTTTCGACATCGTCACCGACCTCTCGAGTGAGACCGTCCCACGGCTTTACCCCCTGAAGCACACTCTGACCT GACGATGCAGTTGTTGGCCTGTCAGCCAACATTGTCTGGCGAGCGGGCATCCCGCTGAGGAAGAAGCTGATGCTG GCCTGCATCTGCTCCCTCACCGTCTTCATGGTCGTCGTCGCCATCGTCAGGATCACCGTCGGGGCGCCGGGCAAG GCCCCCGACCTTTCGTGGCTGCTGCTATGGAACTCGGTCGAGATGACGCTCGGTACCTGGCCCCCGTGCTCTCCC TCCTCCCTCCGACAAGGTGACCGCTGACGGAGAGGCCGCTGTGGTTACGAAAGCCATCTTCGTGGCCTGCATCGC CTCCTTCCGGAGCCTCTACTGCCAGACGAGGAGGCCTCACCGGGCAAGCGACGGCACGCCGCCTCATCCCAGGAA GAAGACGTCGGCACGCACCGCCTTCCTCTCCACCCTCAACACCGGCACCTTGTTCGAGGAAGAAACGACGCAGTG GTTCCGCCAAGGGCTGACGGAAGCCGGAGAGCCTCGCTTTGGCCCCGACACGAGCGGCGTCAAGATCATTGCGCT GTCCGATGTCTCTGACAGCAACCACGTGTGA |