Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2305
Gene name
LocationContig_1542:2989..4436
Strand-
Gene length (bp)1447
Transcript length (bp)1392
Coding sequence length (bp)1392
Protein length (aa) 464

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P41365|LIPB_CANAR Lipase B OS=Candida antarctica PE=1 SV=1 151 394 7.0E-27

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2305
MKLAITFHFAIICSAAATARYAQNQDLEERQLIGDVVGPVVSPITNGLLLTLHNAVVAGDAGKVLDVLHRLKPAG
RPKTVEEASSILRAIATSSPPSLVEYIAQLLVNGLFFGSIDDLFSYANGLFSEDSRSNHSNPDPPTPVYPKVDDC
DAPYSSSESDLRSAIFIPSGFSYGIKPPVVLFPGTASTGYASFIGSFIPLLSGSEWADPVWVNVPDMLVEDAQVN
AEYAAYALNYIASLTRRNVSMIAWSQGNINTQWAFKYWRSTRNITNNHVAISADYKGTVAANILNPSGLVNVPSV
VQQQSGSDFIRTLRANGGDSAYVPTTSVYSGFLDMIVQPQSGSGASALLLDERGVGVTNAEVQAICRGLPGGSLY
THESMLLNPLLLALARDALTNDGPGKVSRLNLKEVCSTHLSPGLGLSELLITESTLIIAGIKLLSHAPKVSKEPA
IQKYSTIALERCS*
Coding >Hirsu2|2305
ATGAAGCTAGCGATTACCTTTCACTTTGCGATTATATGCAGTGCTGCCGCTACTGCGCGATATGCGCAAAACCAG
GATCTCGAAGAACGTCAACTGATTGGTGATGTCGTGGGTCCCGTTGTGAGCCCAATCACTAACGGCCTCCTTCTC
ACCCTTCATAACGCCGTGGTAGCGGGAGACGCGGGCAAAGTACTCGATGTGCTACATCGGCTAAAACCAGCAGGA
AGACCTAAAACTGTGGAGGAGGCCTCATCCATCTTACGAGCGATTGCAACGTCATCCCCGCCAAGTTTAGTTGAG
TACATAGCTCAGCTGCTTGTTAATGGTCTTTTCTTTGGATCTATCGACGATCTCTTCAGCTACGCCAATGGCCTT
TTTTCAGAGGACAGTCGCAGCAATCATAGTAATCCGGATCCCCCAACGCCTGTATATCCAAAAGTAGACGACTGT
GATGCCCCTTACTCTTCTTCCGAGTCGGATCTCCGTTCTGCCATCTTTATCCCGAGTGGTTTTAGCTACGGCATA
AAGCCGCCAGTCGTCCTGTTCCCCGGGACTGCAAGCACAGGATACGCATCCTTTATAGGCAGTTTCATACCTCTT
CTTTCGGGTTCCGAGTGGGCCGACCCGGTCTGGGTCAACGTGCCTGACATGTTAGTGGAGGATGCGCAGGTAAAC
GCCGAGTATGCAGCATACGCACTCAACTACATTGCCTCACTTACAAGACGCAACGTCTCCATGATTGCGTGGTCC
CAGGGAAACATCAACACCCAGTGGGCATTTAAGTACTGGCGCTCAACACGCAATATTACAAATAACCACGTTGCG
ATATCTGCCGACTATAAGGGCACGGTCGCCGCCAATATCCTCAATCCTTCTGGCCTCGTTAATGTCCCGAGCGTC
GTCCAGCAACAAAGCGGGAGTGATTTTATTAGAACACTCCGCGCCAACGGGGGAGATTCCGCCTATGTTCCCACC
ACAAGTGTCTACTCTGGCTTTCTCGACATGATCGTACAGCCTCAATCAGGATCAGGGGCTTCCGCACTCCTCCTG
GACGAGAGAGGCGTCGGCGTCACTAATGCCGAGGTTCAAGCTATCTGCCGCGGCCTACCGGGCGGCAGCCTTTAT
ACGCACGAAAGCATGCTGCTAAACCCGCTGCTGCTAGCTCTAGCTAGAGATGCTCTTACAAACGATGGACCAGGC
AAGGTGTCGAGATTAAATCTTAAAGAGGTCTGCAGCACCCACCTCTCACCAGGGCTGGGATTGAGCGAGCTTTTA
ATTACGGAGAGTACTTTAATTATCGCAGGCATAAAGCTACTATCGCATGCACCAAAGGTAAGCAAAGAGCCGGCT
ATTCAAAAGTACTCAACGATAGCTTTAGAAAGATGTTCCTAG
Transcript >Hirsu2|2305
ATGAAGCTAGCGATTACCTTTCACTTTGCGATTATATGCAGTGCTGCCGCTACTGCGCGATATGCGCAAAACCAG
GATCTCGAAGAACGTCAACTGATTGGTGATGTCGTGGGTCCCGTTGTGAGCCCAATCACTAACGGCCTCCTTCTC
ACCCTTCATAACGCCGTGGTAGCGGGAGACGCGGGCAAAGTACTCGATGTGCTACATCGGCTAAAACCAGCAGGA
AGACCTAAAACTGTGGAGGAGGCCTCATCCATCTTACGAGCGATTGCAACGTCATCCCCGCCAAGTTTAGTTGAG
TACATAGCTCAGCTGCTTGTTAATGGTCTTTTCTTTGGATCTATCGACGATCTCTTCAGCTACGCCAATGGCCTT
TTTTCAGAGGACAGTCGCAGCAATCATAGTAATCCGGATCCCCCAACGCCTGTATATCCAAAAGTAGACGACTGT
GATGCCCCTTACTCTTCTTCCGAGTCGGATCTCCGTTCTGCCATCTTTATCCCGAGTGGTTTTAGCTACGGCATA
AAGCCGCCAGTCGTCCTGTTCCCCGGGACTGCAAGCACAGGATACGCATCCTTTATAGGCAGTTTCATACCTCTT
CTTTCGGGTTCCGAGTGGGCCGACCCGGTCTGGGTCAACGTGCCTGACATGTTAGTGGAGGATGCGCAGGTAAAC
GCCGAGTATGCAGCATACGCACTCAACTACATTGCCTCACTTACAAGACGCAACGTCTCCATGATTGCGTGGTCC
CAGGGAAACATCAACACCCAGTGGGCATTTAAGTACTGGCGCTCAACACGCAATATTACAAATAACCACGTTGCG
ATATCTGCCGACTATAAGGGCACGGTCGCCGCCAATATCCTCAATCCTTCTGGCCTCGTTAATGTCCCGAGCGTC
GTCCAGCAACAAAGCGGGAGTGATTTTATTAGAACACTCCGCGCCAACGGGGGAGATTCCGCCTATGTTCCCACC
ACAAGTGTCTACTCTGGCTTTCTCGACATGATCGTACAGCCTCAATCAGGATCAGGGGCTTCCGCACTCCTCCTG
GACGAGAGAGGCGTCGGCGTCACTAATGCCGAGGTTCAAGCTATCTGCCGCGGCCTACCGGGCGGCAGCCTTTAT
ACGCACGAAAGCATGCTGCTAAACCCGCTGCTGCTAGCTCTAGCTAGAGATGCTCTTACAAACGATGGACCAGGC
AAGGTGTCGAGATTAAATCTTAAAGAGGTCTGCAGCACCCACCTCTCACCAGGGCTGGGATTGAGCGAGCTTTTA
ATTACGGAGAGTACTTTAATTATCGCAGGCATAAAGCTACTATCGCATGCACCAAAGGTAAGCAAAGAGCCGGCT
ATTCAAAAGTACTCAACGATAGCTTTAGAAAGATGTTCCTAG
Gene >Hirsu2|2305
ATGAAGCTAGCGATTACCTTTCACTTTGCGATTATATGCAGTGCTGCCGCTACTGCGCGATATGCGCAAAACCAG
GATCTCGAAGAACGTCAACTGATTGGTGATGTCGTGGGTCCCGTTGTGAGCCCAATCACTAACGGCCTCCTTCTC
ACCCTTCATAACGCCGTGGTAGCGGGAGACGCGGGCAAAGTACTCGATGTGCTACATCGGCTAAAACCAGCAGGA
AGACCTAAAACTGTGGAGGAGGCCTCATCCATCTTACGAGCGATTGCAACGTCATCCCCGCCAAGTTTAGTTGAG
TACATAGCTCAGCTGCTTGTTAATGGTCTTTTCTTTGGATCTATCGACGATCTCTTCAGCTACGCCAATGGCCTT
TTTTCAGAGGACAGTCGCAGCAATCATAGGTAAGTTGGACGGAACCCCGTAACGAGACGAGAAAGCTAAATTCTA
CATCTGCAGTAATCCGGATCCCCCAACGCCTGTATATCCAAAAGTAGACGACTGTGATGCCCCTTACTCTTCTTC
CGAGTCGGATCTCCGTTCTGCCATCTTTATCCCGAGTGGTTTTAGCTACGGCATAAAGCCGCCAGTCGTCCTGTT
CCCCGGGACTGCAAGCACAGGATACGCATCCTTTATAGGCAGTTTCATACCTCTTCTTTCGGGTTCCGAGTGGGC
CGACCCGGTCTGGGTCAACGTGCCTGACATGTTAGTGGAGGATGCGCAGGTAAACGCCGAGTATGCAGCATACGC
ACTCAACTACATTGCCTCACTTACAAGACGCAACGTCTCCATGATTGCGTGGTCCCAGGGAAACATCAACACCCA
GTGGGCATTTAAGTACTGGCGCTCAACACGCAATATTACAAATAACCACGTTGCGATATCTGCCGACTATAAGGG
CACGGTCGCCGCCAATATCCTCAATCCTTCTGGCCTCGTTAATGTCCCGAGCGTCGTCCAGCAACAAAGCGGGAG
TGATTTTATTAGAACACTCCGCGCCAACGGGGGAGATTCCGCCTATGTTCCCACCACAAGTGTCTACTCTGGCTT
TCTCGACATGATCGTACAGCCTCAATCAGGATCAGGGGCTTCCGCACTCCTCCTGGACGAGAGAGGCGTCGGCGT
CACTAATGCCGAGGTTCAAGCTATCTGCCGCGGCCTACCGGGCGGCAGCCTTTATACGCACGAAAGCATGCTGCT
AAACCCGCTGCTGCTAGCTCTAGCTAGAGATGCTCTTACAAACGATGGACCAGGCAAGGTGTCGAGATTAAATCT
TAAAGAGGTCTGCAGCACCCACCTCTCACCAGGGCTGGGATTGAGCGAGCTTTTAATTACGGAGAGTACTTTAAT
TATCGCAGGCATAAAGCTACTATCGCATGCACCAAAGGTAAGCAAAGAGCCGGCTATTCAAAAGTACTCAACGAT
AGCTTTAGAAAGATGTTCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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