Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2303
Gene name
LocationContig_1541:2534..2962
Strand-
Gene length (bp)428
Transcript length (bp)339
Coding sequence length (bp)339
Protein length (aa) 113

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07876 Dabb Stress responsive A/B Barrel Domain 7.2E-24 4 107

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6951 0.2653 0.1894 0.0425 0.5395 0.0764 0.0715 0.1443 0.0449 0.0612

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup492
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3319
Ophiocordyceps australis map64 (Brazil) OphauB2|1711
Ophiocordyceps australis map64 (Brazil) OphauB2|4547
Ophiocordyceps camponoti-floridani Ophcf2|03133
Ophiocordyceps kimflemingae Ophio5|3078
Ophiocordyceps subramaniannii Hirsu2|11099
Ophiocordyceps subramaniannii Hirsu2|2303 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6062

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2303
MAPIVHIVFFQFKPELTAAERQKVCDQMLALKDSCLHPESEKPYIQSSVGGLDRSIEGAQEGMTHAFVVEFASQD
DRDYYVRQDPAHRAFVQHVLPKLVKAQIIDFSPGLFC*
Coding >Hirsu2|2303
ATGGCGCCCATCGTCCACATCGTCTTCTTCCAGTTCAAGCCCGAGCTCACGGCGGCCGAGCGCCAAAAGGTGTGC
GACCAGATGCTGGCACTCAAGGACAGCTGCCTGCACCCGGAGTCCGAGAAGCCGTACATCCAGTCGTCGGTCGGC
GGGCTGGACCGGAGCATCGAGGGCGCGCAGGAGGGCATGACGCACGCCTTCGTCGTCGAGTTCGCCAGCCAGGAC
GACCGCGACTACTACGTCCGCCAGGACCCGGCCCACCGCGCCTTTGTACAGCACGTGCTGCCCAAGCTGGTCAAG
GCCCAGATCATCGACTTCAGCCCGGGCCTGTTCTGCTGA
Transcript >Hirsu2|2303
ATGGCGCCCATCGTCCACATCGTCTTCTTCCAGTTCAAGCCCGAGCTCACGGCGGCCGAGCGCCAAAAGGTGTGC
GACCAGATGCTGGCACTCAAGGACAGCTGCCTGCACCCGGAGTCCGAGAAGCCGTACATCCAGTCGTCGGTCGGC
GGGCTGGACCGGAGCATCGAGGGCGCGCAGGAGGGCATGACGCACGCCTTCGTCGTCGAGTTCGCCAGCCAGGAC
GACCGCGACTACTACGTCCGCCAGGACCCGGCCCACCGCGCCTTTGTACAGCACGTGCTGCCCAAGCTGGTCAAG
GCCCAGATCATCGACTTCAGCCCGGGCCTGTTCTGCTGA
Gene >Hirsu2|2303
ATGGCGCCCATCGTCCACATCGTCTTCTTCCAGTTCAAGCCCGAGCTCACGGCGGCCGAGCGCCAAAAGGTAGGT
CCATCGTCCGTCGTCTGCCGCGCGACGGCAGCCCGTGAGGGTGGAGGGATGAAGCGGCTGACGAGACTTGCAAAC
GGCCTCAGGTGTGCGACCAGATGCTGGCACTCAAGGACAGCTGCCTGCACCCGGAGTCCGAGAAGCCGTACATCC
AGTCGTCGGTCGGCGGGCTGGACCGGAGCATCGAGGGCGCGCAGGAGGGCATGACGCACGCCTTCGTCGTCGAGT
TCGCCAGCCAGGACGACCGCGACTACTACGTCCGCCAGGACCCGGCCCACCGCGCCTTTGTACAGCACGTGCTGC
CCAAGCTGGTCAAGGCCCAGATCATCGACTTCAGCCCGGGCCTGTTCTGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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