Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2302
Gene name
LocationContig_1541:174..857
Strand-
Gene length (bp)683
Transcript length (bp)303
Coding sequence length (bp)303
Protein length (aa) 101

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.4843 0.509 0.5087 0.1822 0.2215 0.071 0.2491 0.0925 0.1478 0.0083

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2033
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4548
Ophiocordyceps camponoti-floridani Ophcf2|03132
Ophiocordyceps camponoti-rufipedis Ophun1|3832
Ophiocordyceps kimflemingae Ophio5|3077
Ophiocordyceps subramaniannii Hirsu2|2302 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5623

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2302
MAQPSHPTLINLPPPGSNPETPSEMPGTPTSTTTSLSALSTTAIKDGHRGHFPPGTLGRGHQHTPTPTTARPTPS
PPTTTPWTRTSTPSPPAPSAATTTA*
Coding >Hirsu2|2302
ATGGCCCAGCCCTCGCACCCGACCCTCATCAACCTACCTCCGCCGGGCTCCAACCCTGAGACGCCGTCCGAGATG
CCCGGCACCCCCACCAGCACAACCACCTCGCTGTCCGCCCTCTCCACCACGGCCATCAAGGACGGCCACCGCGGC
CACTTCCCGCCCGGCACCCTCGGCCGCGGCCACCAGCACACACCGACACCAACTACCGCGAGGCCGACTCCGTCA
CCACCGACCACGACCCCATGGACGAGGACCTCGACGCCCTCGCCACCCGCTCCCTCGGCGGCTACGACGACCGCA
TGA
Transcript >Hirsu2|2302
ATGGCCCAGCCCTCGCACCCGACCCTCATCAACCTACCTCCGCCGGGCTCCAACCCTGAGACGCCGTCCGAGATG
CCCGGCACCCCCACCAGCACAACCACCTCGCTGTCCGCCCTCTCCACCACGGCCATCAAGGACGGCCACCGCGGC
CACTTCCCGCCCGGCACCCTCGGCCGCGGCCACCAGCACACACCGACACCAACTACCGCGAGGCCGACTCCGTCA
CCACCGACCACGACCCCATGGACGAGGACCTCGACGCCCTCGCCACCCGCTCCCTCGGCGGCTACGACGACCGCA
TGA
Gene >Hirsu2|2302
ATGGCCCAGCCCTCGCACCCGACCCTCATCAACCTACCTCCGCCGGGCTCCAACCCTGAGACGCCGTCCGAGATG
CCGTACGTGTTTCCCTCTGCCTCGTCTCGGCCCGCTGCCTGACTGACGAACAAACAGCGGCACCCCCACCAGCAC
AACCACCTCGCTGTCCGCCCTCTCCACCACGGCCATCAAGGACGGCCACCGCGGCCACTTCCCGCCCGGCACCCT
CGGCCGCGGCCACCAGCACAGTCCCTCCTCCACCAGCCTCGAGGCTGAGCGCGCCGACCGCATCTCCCGCCTGGC
CGGCCTCGAGCGCGTCTCGGCCCTGCGCGCCGGCCCCCAGGCCCCCGCCCAGCCCGGCGGCTTCCTCTCACCGCA
GACGACGCCCACCTCCACCACCGGCTTCCCGCCCAACCTGCCCGCCTCGAGCCAGCTGACGCCGGCCTATTTCGA
CAGCAACGGCCAGCCCGTCGCCGTCACCAAGATGAGCACCGTCGGCACCGCCAGCGCCACCGAGAGCCAGGCCGA
CGACGCCCGCACCACCGCCGGCGACCGCGACGAGGACATGCTCAGCACCGACACCAACTACCGCGAGGCCGACTC
CGTCACCACCGACCACGACCCCATGGACGAGGACCTCGACGCCCTCGCCACCCGCTCCCTCGGCGGCTACGACGA
CCGCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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