Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2300
Gene name
LocationContig_1540:496..1112
Strand-
Gene length (bp)616
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3664 0.8226 0.0611 0.0269 0.1416 0.0075 0.0825 0.0448 0.0991 0.0026

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2032
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3747
Ophiocordyceps australis map64 (Brazil) OphauB2|3820
Ophiocordyceps camponoti-floridani Ophcf2|05141
Ophiocordyceps camponoti-rufipedis Ophun1|5101
Ophiocordyceps kimflemingae Ophio5|6127
Ophiocordyceps subramaniannii Hirsu2|2300 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2300
MSTKRKAPAKLAAPVARAAATLPTKNTIDESRTSVLGTDTLPSSQMETIEISSDNDDEDEDDSDGASSHGGDRPG
DAQPAEDAASSGAGAAPATRLNGLKRGGEESDGEPTSPSFGELLRDGEVIDVAAVLQQGGAANGAVAPRPRAAAI
VPPSHQSLTTVLSQALRTDDTDLLES*
Coding >Hirsu2|2300
ATGTCGACGAAGCGAAAAGCGCCGGCCAAGCTGGCAGCCCCGGTGGCCAGGGCCGCCGCGACGCTCCCCACCAAG
AACACCATCGACGAGTCCAGGACGTCCGTCCTGGGCACCGATACCCTGCCGAGCTCGCAGATGGAGACGATAGAG
ATCTCGTCCGACAACGACGATGAAGACGAAGACGACAGCGACGGGGCCTCCTCGCACGGCGGGGACCGCCCGGGG
GACGCACAGCCGGCCGAGGACGCCGCGAGCTCGGGCGCCGGCGCCGCCCCCGCGACACGCCTCAACGGCCTTAAA
CGCGGCGGCGAAGAATCGGACGGGGAGCCGACGTCGCCATCCTTCGGCGAGCTGCTCCGGGACGGCGAGGTCATC
GACGTGGCGGCGGTGCTGCAACAAGGCGGCGCGGCCAACGGGGCGGTGGCGCCACGGCCGCGGGCGGCGGCCATC
GTGCCGCCCTCGCACCAGTCGCTCACGACGGTCCTCAGCCAGGCCCTGCGGACGGACGACACGGACCTCCTCGAG
TCCTGA
Transcript >Hirsu2|2300
ATGTCGACGAAGCGAAAAGCGCCGGCCAAGCTGGCAGCCCCGGTGGCCAGGGCCGCCGCGACGCTCCCCACCAAG
AACACCATCGACGAGTCCAGGACGTCCGTCCTGGGCACCGATACCCTGCCGAGCTCGCAGATGGAGACGATAGAG
ATCTCGTCCGACAACGACGATGAAGACGAAGACGACAGCGACGGGGCCTCCTCGCACGGCGGGGACCGCCCGGGG
GACGCACAGCCGGCCGAGGACGCCGCGAGCTCGGGCGCCGGCGCCGCCCCCGCGACACGCCTCAACGGCCTTAAA
CGCGGCGGCGAAGAATCGGACGGGGAGCCGACGTCGCCATCCTTCGGCGAGCTGCTCCGGGACGGCGAGGTCATC
GACGTGGCGGCGGTGCTGCAACAAGGCGGCGCGGCCAACGGGGCGGTGGCGCCACGGCCGCGGGCGGCGGCCATC
GTGCCGCCCTCGCACCAGTCGCTCACGACGGTCCTCAGCCAGGCCCTGCGGACGGACGACACGGACCTCCTCGAG
TCCTGA
Gene >Hirsu2|2300
ATGTCGACGAAGCGAAAAGCGCCGGCCAAGCTGGCAGCCCCGGTGGCCAGGGCCGCCGCGACGCTCCCCACCAAG
AACACCATCGACGAGTCCAGGACGTCCGTCCTGGGCACCGATACCCTGCCGAGCTCGCAGATGGAGACGATAGAG
ATCTCGTCCGACAACGACGATGAAGACGAAGACGACAGCGACGGGGCCTCCTCGCACGGCGGGGACCGCCCGGGG
GACGCACAGCCGGCCGAGGACGCCGCGAGCTCGGGCGCCGGCGCCGCCCCCGCGACACGCCTCAACGGCCTTAAA
CGCGGCGGCGAAGAATCGGACGGGGAGCCGACGTCGCCATCCTTCGGCGAGCTGCTCCGGGACGGCGAGGTCATC
GACGTGGCGGCGGTGCTGCAACAAGGCGGCGCGGCCAACGGGGCGGTGGCGCCACGGCCGCGGGCGGCGGCCATC
GTGCCGCCCTCGCACCAGTCGCTCACGACGGTCCTCAGCCAGGCCCTGCGGACGGACGACACGGACCTCCTCGAG
TCGTGCCTGCACACGACGGACCTCAACACGGTGCGCAACACGATCGAGCGCATCGACAGCTCCCTGGCCGGCCTC
CTGCTCACCAAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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