Protein ID | Hirsu2|2295 |
Gene name | |
Location | Contig_154:17015..17702 |
Strand | - |
Gene length (bp) | 687 |
Transcript length (bp) | 687 |
Coding sequence length (bp) | 687 |
Protein length (aa) | 229 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06472 | ABC_membrane_2 | ABC transporter transmembrane region 2 | 5.8E-14 | 152 | 219 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P41909|PXA1_YEAST | Peroxisomal long-chain fatty acid import protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PXA1 PE=1 SV=2 | 77 | 208 | 2.0E-10 |
sp|Q61285|ABCD2_MOUSE | ATP-binding cassette sub-family D member 2 OS=Mus musculus GN=Abcd2 PE=1 SV=1 | 139 | 219 | 8.0E-10 |
sp|Q9QY44|ABCD2_RAT | ATP-binding cassette sub-family D member 2 OS=Rattus norvegicus GN=Abcd2 PE=1 SV=1 | 139 | 219 | 6.0E-09 |
sp|Q9UBJ2|ABCD2_HUMAN | ATP-binding cassette sub-family D member 2 OS=Homo sapiens GN=ABCD2 PE=1 SV=1 | 139 | 219 | 9.0E-09 |
sp|P48410|ABCD1_MOUSE | ATP-binding cassette sub-family D member 1 OS=Mus musculus GN=Abcd1 PE=1 SV=1 | 134 | 210 | 1.0E-07 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P41909|PXA1_YEAST | Peroxisomal long-chain fatty acid import protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PXA1 PE=1 SV=2 | 77 | 208 | 2.0E-10 |
sp|Q61285|ABCD2_MOUSE | ATP-binding cassette sub-family D member 2 OS=Mus musculus GN=Abcd2 PE=1 SV=1 | 139 | 219 | 8.0E-10 |
sp|Q9QY44|ABCD2_RAT | ATP-binding cassette sub-family D member 2 OS=Rattus norvegicus GN=Abcd2 PE=1 SV=1 | 139 | 219 | 6.0E-09 |
sp|Q9UBJ2|ABCD2_HUMAN | ATP-binding cassette sub-family D member 2 OS=Homo sapiens GN=ABCD2 PE=1 SV=1 | 139 | 219 | 9.0E-09 |
sp|P48410|ABCD1_MOUSE | ATP-binding cassette sub-family D member 1 OS=Mus musculus GN=Abcd1 PE=1 SV=1 | 134 | 210 | 1.0E-07 |
sp|P33897|ABCD1_HUMAN | ATP-binding cassette sub-family D member 1 OS=Homo sapiens GN=ABCD1 PE=1 SV=2 | 135 | 210 | 7.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0140359 | ABC-type transporter activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0022857 | transmembrane transporter activity | No |
GO:0015399 | primary active transmembrane transporter activity | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0009987 | cellular process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0022804 | active transmembrane transporter activity | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0036094 | small molecule binding | No |
GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
GO:0005488 | binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
GO:0017076 | purine nucleotide binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0005215 | transporter activity | No |
GO:0043167 | ion binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0000166 | nucleotide binding | No |
GO:0043168 | anion binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0110165 | cellular anatomical entity | No |
GO:0006810 | transport | No |
GO:0003674 | molecular_function | No |
GO:0005575 | cellular_component | No |
GO:0140657 | ATP-dependent activity | No |
GO:0097367 | carbohydrate derivative binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion|Peroxisome | Transmembrane domain|Peroxisomal targeting signal | 0.0933 | 0.1787 | 0.11 | 0.0645 | 0.715 | 0.0557 | 0.5816 | 0.3046 | 0.391 | 0.7516 |
Orthofinder run ID | 4 |
Orthogroup | 9030 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|2295 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2295 MAAQSNLRRTAAEDALATFVEKWSTLIGGKLRNTSRTARALATLALTLSIVLGAEGTRRRWKRQRLEREQGRKLV RTNSWLHNKDGSRTIYVPYKQGTSKVTISTTKPLTFEAHRRLFLNPPRVSGLGDGAVPAAHTKPGLNLAFLHQFL SLMSIMIPRWSSKEAGLLLSHGVFLLLRTYLSLVVARLDGELVRDLVAGNGKAFLWGILKVRCATPPPTCRARHT FQR* |
Coding | >Hirsu2|2295 ATGGCTGCGCAATCAAACCTGCGAAGAACGGCGGCCGAGGACGCGCTGGCGACCTTCGTCGAGAAATGGAGCACC CTCATCGGCGGCAAGCTCCGCAACACTTCGCGCACGGCACGCGCCCTGGCGACCCTCGCCCTTACCTTGTCCATC GTCCTGGGAGCCGAGGGCACGCGCCGCCGCTGGAAGCGGCAGCGTCTTGAGCGCGAGCAGGGTCGGAAGCTCGTC CGAACCAACTCGTGGCTGCACAACAAAGACGGCTCGCGCACGATTTACGTCCCCTACAAGCAGGGCACCTCCAAG GTCACCATCAGCACCACCAAGCCGCTCACCTTCGAGGCCCACCGCCGCCTTTTCCTCAACCCGCCCCGCGTCTCC GGCCTCGGCGATGGAGCCGTCCCGGCCGCGCACACCAAGCCGGGCCTGAATTTGGCCTTTTTGCACCAGTTCCTG AGCCTCATGAGCATTATGATACCCCGATGGTCCAGTAAGGAGGCCGGGCTGCTCCTCAGCCACGGCGTCTTCCTC CTGCTGCGAACGTACCTTTCGTTGGTCGTTGCGCGCTTGGACGGTGAGCTTGTTCGTGATCTCGTCGCCGGCAAC GGCAAGGCCTTTCTCTGGGGCATCCTCAAGGTACGCTGCGCTACGCCCCCTCCCACTTGCCGGGCACGACATACT TTCCAGCGCTGA |
Transcript | >Hirsu2|2295 ATGGCTGCGCAATCAAACCTGCGAAGAACGGCGGCCGAGGACGCGCTGGCGACCTTCGTCGAGAAATGGAGCACC CTCATCGGCGGCAAGCTCCGCAACACTTCGCGCACGGCACGCGCCCTGGCGACCCTCGCCCTTACCTTGTCCATC GTCCTGGGAGCCGAGGGCACGCGCCGCCGCTGGAAGCGGCAGCGTCTTGAGCGCGAGCAGGGTCGGAAGCTCGTC CGAACCAACTCGTGGCTGCACAACAAAGACGGCTCGCGCACGATTTACGTCCCCTACAAGCAGGGCACCTCCAAG GTCACCATCAGCACCACCAAGCCGCTCACCTTCGAGGCCCACCGCCGCCTTTTCCTCAACCCGCCCCGCGTCTCC GGCCTCGGCGATGGAGCCGTCCCGGCCGCGCACACCAAGCCGGGCCTGAATTTGGCCTTTTTGCACCAGTTCCTG AGCCTCATGAGCATTATGATACCCCGATGGTCCAGTAAGGAGGCCGGGCTGCTCCTCAGCCACGGCGTCTTCCTC CTGCTGCGAACGTACCTTTCGTTGGTCGTTGCGCGCTTGGACGGTGAGCTTGTTCGTGATCTCGTCGCCGGCAAC GGCAAGGCCTTTCTCTGGGGCATCCTCAAGGTACGCTGCGCTACGCCCCCTCCCACTTGCCGGGCACGACATACT TTCCAGCGCTGA |
Gene | >Hirsu2|2295 ATGGCTGCGCAATCAAACCTGCGAAGAACGGCGGCCGAGGACGCGCTGGCGACCTTCGTCGAGAAATGGAGCACC CTCATCGGCGGCAAGCTCCGCAACACTTCGCGCACGGCACGCGCCCTGGCGACCCTCGCCCTTACCTTGTCCATC GTCCTGGGAGCCGAGGGCACGCGCCGCCGCTGGAAGCGGCAGCGTCTTGAGCGCGAGCAGGGTCGGAAGCTCGTC CGAACCAACTCGTGGCTGCACAACAAAGACGGCTCGCGCACGATTTACGTCCCCTACAAGCAGGGCACCTCCAAG GTCACCATCAGCACCACCAAGCCGCTCACCTTCGAGGCCCACCGCCGCCTTTTCCTCAACCCGCCCCGCGTCTCC GGCCTCGGCGATGGAGCCGTCCCGGCCGCGCACACCAAGCCGGGCCTGAATTTGGCCTTTTTGCACCAGTTCCTG AGCCTCATGAGCATTATGATACCCCGATGGTCCAGTAAGGAGGCCGGGCTGCTCCTCAGCCACGGCGTCTTCCTC CTGCTGCGAACGTACCTTTCGTTGGTCGTTGCGCGCTTGGACGGTGAGCTTGTTCGTGATCTCGTCGCCGGCAAC GGCAAGGCCTTTCTCTGGGGCATCCTCAAGGTACGCTGCGCTACGCCCCCTCCCACTTGCCGGGCACGACATACT TTCCAGCGCTGA |