Protein ID | Hirsu2|2290 |
Gene name | |
Location | Contig_154:5883..6964 |
Strand | - |
Gene length (bp) | 1081 |
Transcript length (bp) | 864 |
Coding sequence length (bp) | 864 |
Protein length (aa) | 288 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00651 | BTB | BTB/POZ domain | 8.7E-06 | 71 | 132 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6337 | 0.3409 | 0.1702 | 0.2845 | 0.111 | 0.0509 | 0.1953 | 0.1811 | 0.1571 | 0.0462 |
Orthofinder run ID | 4 |
Orthogroup | 318 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2290 MMLGSKLETSSKSFTSRSHSKVSKSSFSFSRDSGVSKRRHEPRHRRPTTASTTSTSRDTIMGNDPPSSAIVTLVV GADQRLFAAHEEVLCMSPFFFNTLRGIHPGSSAKRVSLPDEEPQIFSSVLEYLYKGDYFPRLMHNKRRNSWELES ASEEERGAAESTVYHRGVDGDLLKDTVIYCAAQRYGLEELKKLALRKQGLQSGIQCSTILASARYAYANTPDNDS KLRAHYLALIIRSRSTFKRSGTMQLEMYNGGTPLFFDLFVALCNHVDDISSAQSTPRSNRHF* |
Coding | >Hirsu2|2290 ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAACGACCCGCCATCGTCGGCCATCGTCACGCTCGTTGTC GGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACACTCTGAGG GGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTCGGTGCTC GAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCTGGAGTCC GCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCTCAAAGAC ACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCAAGGTCTT CAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGACTCC AAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCAGCTC GAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACATTTCT TCAGCACAGAGTACGCCTCGGTCCAATCGCCACTTCTGA |
Transcript | >Hirsu2|2290 ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAACGACCCGCCATCGTCGGCCATCGTCACGCTCGTTGTC GGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACACTCTGAGG GGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTCGGTGCTC GAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCTGGAGTCC GCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCTCAAAGAC ACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCAAGGTCTT CAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGACTCC AAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCAGCTC GAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACATTTCT TCAGCACAGAGTACGCCTCGGTCCAATCGCCACTTCTGA |
Gene | >Hirsu2|2290 ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAAGTGAGTGGAGGCCCCGGCCCCGTCCGTCCTTTGCGTT GTCCTCCGTGCCCGCGTCGGGACGCTCACCTTCTTCACCCGGCAGCGACCCGCCATCGTCGGCCATCGTCACGCT CGTTGTCGGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACAC TCTGAGGGGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTC GGTGCTCGAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCT GGAGTCCGCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCT CAAAGACACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCA AGGTCTTCGTAAGTACTCTTTCCCGCTCCCCCCTACTTCCATGGCCTTCCTCTCAGCGACCCATCCTGATCGCCG GGCAGAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGA CTCCAAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCA GCTCGAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACAT TTCTTCAGCACAGTATGACACGGTCTCCCCTGAAGAAGACTCTGTACGTGCGTGCTGACACTTTTATCTCGTTAG GAGTACGCCTCGGTCCAATCGCCACTTCTGA |