Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2290
Gene name
Location	Contig_154:5883..6964
Strand	-
Gene length (bp)	1081
Transcript length (bp)	864
Coding sequence length (bp)	864
Protein length (aa)	288

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	8.7E-06	71	132

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2290 MMLGSKLETSSKSFTSRSHSKVSKSSFSFSRDSGVSKRRHEPRHRRPTTASTTSTSRDTIMGNDPPSSAIVTLVV GADQRLFAAHEEVLCMSPFFFNTLRGIHPGSSAKRVSLPDEEPQIFSSVLEYLYKGDYFPRLMHNKRRNSWELES ASEEERGAAESTVYHRGVDGDLLKDTVIYCAAQRYGLEELKKLALRKQGLQSGIQCSTILASARYAYANTPDNDS KLRAHYLALIIRSRSTFKRSGTMQLEMYNGGTPLFFDLFVALCNHVDDISSAQSTPRSNRHF*
Coding	>Hirsu2\|2290 ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAACGACCCGCCATCGTCGGCCATCGTCACGCTCGTTGTC GGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACACTCTGAGG GGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTCGGTGCTC GAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCTGGAGTCC GCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCTCAAAGAC ACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCAAGGTCTT CAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGACTCC AAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCAGCTC GAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACATTTCT TCAGCACAGAGTACGCCTCGGTCCAATCGCCACTTCTGA
Transcript	>Hirsu2\|2290 ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAACGACCCGCCATCGTCGGCCATCGTCACGCTCGTTGTC GGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACACTCTGAGG GGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTCGGTGCTC GAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCTGGAGTCC GCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCTCAAAGAC ACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCAAGGTCTT CAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGACTCC AAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCAGCTC GAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACATTTCT TCAGCACAGAGTACGCCTCGGTCCAATCGCCACTTCTGA
Gene	>Hirsu2\|2290 ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAAGTGAGTGGAGGCCCCGGCCCCGTCCGTCCTTTGCGTT GTCCTCCGTGCCCGCGTCGGGACGCTCACCTTCTTCACCCGGCAGCGACCCGCCATCGTCGGCCATCGTCACGCT CGTTGTCGGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACAC TCTGAGGGGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTC GGTGCTCGAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCT GGAGTCCGCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCT CAAAGACACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCA AGGTCTTCGTAAGTACTCTTTCCCGCTCCCCCCTACTTCCATGGCCTTCCTCTCAGCGACCCATCCTGATCGCCG GGCAGAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGA CTCCAAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCA GCTCGAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACAT TTCTTCAGCACAGTATGACACGGTCTCCCCTGAAGAAGACTCTGTACGTGCGTGCTGACACTTTTATCTCGTTAG GAGTACGCCTCGGTCCAATCGCCACTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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