Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2290
Gene name
LocationContig_154:5883..6964
Strand-
Gene length (bp)1081
Transcript length (bp)864
Coding sequence length (bp)864
Protein length (aa) 288

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00651 BTB BTB/POZ domain 8.7E-06 71 132

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2290
MMLGSKLETSSKSFTSRSHSKVSKSSFSFSRDSGVSKRRHEPRHRRPTTASTTSTSRDTIMGNDPPSSAIVTLVV
GADQRLFAAHEEVLCMSPFFFNTLRGIHPGSSAKRVSLPDEEPQIFSSVLEYLYKGDYFPRLMHNKRRNSWELES
ASEEERGAAESTVYHRGVDGDLLKDTVIYCAAQRYGLEELKKLALRKQGLQSGIQCSTILASARYAYANTPDNDS
KLRAHYLALIIRSRSTFKRSGTMQLEMYNGGTPLFFDLFVALCNHVDDISSAQSTPRSNRHF*
Coding >Hirsu2|2290
ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC
AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC
TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAACGACCCGCCATCGTCGGCCATCGTCACGCTCGTTGTC
GGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACACTCTGAGG
GGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTCGGTGCTC
GAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCTGGAGTCC
GCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCTCAAAGAC
ACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCAAGGTCTT
CAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGACTCC
AAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCAGCTC
GAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACATTTCT
TCAGCACAGAGTACGCCTCGGTCCAATCGCCACTTCTGA
Transcript >Hirsu2|2290
ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC
AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC
TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAACGACCCGCCATCGTCGGCCATCGTCACGCTCGTTGTC
GGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACACTCTGAGG
GGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTCGGTGCTC
GAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCTGGAGTCC
GCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCTCAAAGAC
ACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCAAGGTCTT
CAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGACTCC
AAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCAGCTC
GAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACATTTCT
TCAGCACAGAGTACGCCTCGGTCCAATCGCCACTTCTGA
Gene >Hirsu2|2290
ATGATGCTCGGATCAAAGCTGGAGACGTCTAGCAAGAGCTTCACCTCCAGGAGCCACAGCAAGGTGTCCAAATCC
AGCTTCTCCTTCAGCAGGGACAGCGGCGTGTCCAAGAGGCGCCATGAACCTCGCCATCGCAGACCGACTACGGCC
TCCACCACCTCAACCAGCAGAGACACCATTATGGGAAAGTGAGTGGAGGCCCCGGCCCCGTCCGTCCTTTGCGTT
GTCCTCCGTGCCCGCGTCGGGACGCTCACCTTCTTCACCCGGCAGCGACCCGCCATCGTCGGCCATCGTCACGCT
CGTTGTCGGCGCGGACCAGCGACTCTTCGCCGCCCACGAGGAGGTCCTCTGCATGAGCCCTTTCTTCTTCAACAC
TCTGAGGGGCATTCACCCGGGGTCGTCGGCGAAACGCGTTTCCCTCCCGGACGAGGAGCCCCAGATCTTCAGCTC
GGTGCTCGAGTACCTCTACAAGGGCGACTACTTCCCCCGCCTGATGCACAATAAGCGACGGAACTCATGGGAGCT
GGAGTCCGCCTCGGAAGAGGAGAGAGGCGCCGCCGAGAGCACCGTCTACCACCGCGGCGTTGATGGAGACCTCCT
CAAAGACACCGTCATCTACTGCGCCGCCCAGAGGTATGGGCTCGAGGAGCTGAAGAAGCTCGCGCTGCGCAAGCA
AGGTCTTCGTAAGTACTCTTTCCCGCTCCCCCCTACTTCCATGGCCTTCCTCTCAGCGACCCATCCTGATCGCCG
GGCAGAATCCGGAATCCAGTGCAGCACCATCCTGGCGTCGGCCCGGTACGCGTACGCCAACACGCCCGACAACGA
CTCCAAGTTGCGAGCACACTACTTGGCGCTCATCATCCGCTCCCGCAGCACCTTCAAGCGCAGCGGGACCATGCA
GCTCGAGATGTACAACGGCGGCACGCCCCTCTTCTTCGATCTCTTCGTCGCTCTGTGCAACCATGTCGACGACAT
TTCTTCAGCACAGTATGACACGGTCTCCCCTGAAGAAGACTCTGTACGTGCGTGCTGACACTTTTATCTCGTTAG
GAGTACGCCTCGGTCCAATCGCCACTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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