© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2289 |
| Gene name | |
| Location | Contig_154:2607..4456 |
| Strand | + |
| Gene length (bp) | 1849 |
| Transcript length (bp) | 1371 |
| Coding sequence length (bp) | 1371 |
| Protein length (aa) | 457 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01399 | PCI | PCI domain | 2.1E-09 | 324 | 447 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7SD63|CSN12_NEUCR | Protein CSN12 homolog OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-8 PE=3 SV=2 | 1 | 456 | 0.0E+00 |
| sp|Q4IMN9|CSN12_GIBZE | Protein CSN12 homolog OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CSN12 PE=3 SV=2 | 1 | 456 | 0.0E+00 |
| sp|Q4WJX0|CSN12_ASPFU | Protein CSN12 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn12 PE=3 SV=1 | 1 | 456 | 2.0E-169 |
| sp|O13873|CSN12_SCHPO | Protein CSN12 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=csn12 PE=3 SV=1 | 101 | 452 | 4.0E-69 |
| sp|Q4P8T5|CSN12_USTMA | Protein CSN12 homolog OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CSN12 PE=3 SV=1 | 100 | 453 | 3.0E-62 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7SD63|CSN12_NEUCR | Protein CSN12 homolog OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-8 PE=3 SV=2 | 1 | 456 | 0.0E+00 |
| sp|Q4IMN9|CSN12_GIBZE | Protein CSN12 homolog OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CSN12 PE=3 SV=2 | 1 | 456 | 0.0E+00 |
| sp|Q4WJX0|CSN12_ASPFU | Protein CSN12 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn12 PE=3 SV=1 | 1 | 456 | 2.0E-169 |
| sp|O13873|CSN12_SCHPO | Protein CSN12 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=csn12 PE=3 SV=1 | 101 | 452 | 4.0E-69 |
| sp|Q4P8T5|CSN12_USTMA | Protein CSN12 homolog OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CSN12 PE=3 SV=1 | 100 | 453 | 3.0E-62 |
| sp|Q6C1L4|CSN12_YARLI | Protein CSN12 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CSN12 PE=3 SV=1 | 122 | 452 | 2.0E-53 |
| sp|P0CR48|CSN12_CRYNJ | Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CSN12 PE=3 SV=1 | 98 | 452 | 7.0E-51 |
| sp|P0CR49|CSN12_CRYNB | Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CSN12 PE=3 SV=1 | 98 | 452 | 7.0E-51 |
| sp|Q5JVF3|PCID2_HUMAN | PCI domain-containing protein 2 OS=Homo sapiens GN=PCID2 PE=1 SV=2 | 94 | 452 | 5.0E-50 |
| sp|Q5FWP8|PCID2_XENLA | PCI domain-containing protein 2 OS=Xenopus laevis GN=pcid2 PE=2 SV=1 | 98 | 452 | 4.0E-48 |
| sp|Q8BFV2|PCID2_MOUSE | PCI domain-containing protein 2 OS=Mus musculus GN=Pcid2 PE=1 SV=1 | 94 | 452 | 2.0E-47 |
| sp|Q5U3P0|PCID2_DANRE | PCI domain-containing protein 2 OS=Danio rerio GN=pcid2 PE=2 SV=1 | 98 | 452 | 5.0E-45 |
| sp|Q2TBN6|PCID2_BOVIN | PCI domain-containing protein 2 OS=Bos taurus GN=PCID2 PE=2 SV=1 | 94 | 452 | 2.0E-42 |
| sp|Q8GWE6|EER5_ARATH | Enhanced ethylene response protein 5 OS=Arabidopsis thaliana GN=EER5 PE=1 SV=1 | 68 | 452 | 4.0E-38 |
| sp|Q54PX7|PCID2_DICDI | PCI domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=pcid2 PE=3 SV=1 | 99 | 452 | 2.0E-36 |
| sp|Q9VTL1|PCID2_DROME | PCI domain-containing protein 2 homolog OS=Drosophila melanogaster GN=PCID2 PE=1 SV=2 | 76 | 456 | 4.0E-33 |
| sp|Q60YJ7|PCID2_CAEBR | PCI domain-containing protein 2 homolog OS=Caenorhabditis briggsae GN=CBG18211 PE=3 SV=1 | 122 | 452 | 5.0E-30 |
| sp|Q95QU0|PCID2_CAEEL | PCI domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=C27F2.10 PE=3 SV=1 | 122 | 452 | 2.0E-28 |
| sp|Q9Y820|YON7_SCHPO | PCI domain-containing protein C1105.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1105.07c PE=4 SV=1 | 71 | 451 | 8.0E-27 |
| sp|Q75BU2|CSN12_ASHGO | COP9 signalosome complex subunit 12 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSN12 PE=3 SV=2 | 124 | 452 | 2.0E-26 |
| sp|Q6BGR7|CSN12_DEBHA | Protein CSN12 homolog OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CSN12 PE=3 SV=2 | 186 | 453 | 2.0E-22 |
| sp|Q6CPB1|CSN12_KLULA | COP9 signalosome complex subunit 12 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CSN12 PE=3 SV=1 | 111 | 453 | 5.0E-21 |
| sp|P47130|CSN12_YEAST | Cop9 signalosome complex subunit 12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSN12 PE=1 SV=1 | 175 | 454 | 5.0E-19 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear export signal | 0.5467 | 0.6054 | 0.1517 | 0.0574 | 0.12 | 0.0027 | 0.0406 | 0.3792 | 0.2078 | 0.003 |
| Orthofinder run ID | 4 |
| Orthogroup | 2025 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2289 MNELFEGFAHAHAIQNGYFLAQTLSPVPPLNDPHRLRRIWQSTNAHSAKGDIKHFIKAQTPHRRGLSNDEINGWV EVYATYWKALGEIVAGEDGKSSWTKAYESWRDLTSILIRGYNNHGFETWTIPSLYVVGKYLRLFAIKSDEERSRT NTGPATGAAIMQDDFDPESEKHAQLRDCEQHLKRIFTLCLNDRAPLEESRKWGIYFVINLLFKTYFKLNSASLSR TILKTLAVYNDKGDMPPLESFPKGQRVTFKYYEGVLFFLEENYVQAEKHLIEAWQLCHRDAKANLERILTYLIPC RLLTSHALPTKQLLEPYPRLQQLFLPLAQCIRRGDLRAFDLALQEGEDEFVKRRIYLTLERGRDIALRNLLRKVF IAGGFDEPKEADTAPVRRTRVPVVEFRAALCMGSGGELIDTDEVECLLANMIYKDLMKGYIARERGIVVLSKKGA FPGTGV* |
| Coding | >Hirsu2|2289 ATGAATGAGCTATTCGAGGGGTTCGCGCATGCGCATGCCATTCAAAATGGCTACTTCCTCGCCCAGACGCTCTCA CCAGTCCCACCGCTCAACGATCCCCACAGGCTCAGGAGAATCTGGCAGAGCACTAATGCCCACAGTGCTAAGGGA GACATCAAACACTTCATCAAGGCGCAGACGCCCCATCGACGAGGCCTCAGTAATGATGAGATAAACGGCTGGGTG GAAGTGTATGCGACATACTGGAAAGCTCTCGGTGAAATTGTAGCCGGTGAGGATGGAAAGTCTTCATGGACCAAG GCCTACGAGTCTTGGAGAGACCTGACCTCGATCCTGATCCGAGGCTACAACAACCACGGCTTCGAAACCTGGACT ATCCCCAGCCTGTACGTGGTGGGAAAGTACCTGAGGTTATTCGCCATCAAGTCCGACGAGGAGCGCAGCCGTACC AATACAGGCCCTGCTACTGGTGCCGCCATCATGCAGGACGACTTCGACCCAGAATCGGAGAAACACGCACAGCTG AGAGACTGTGAGCAACATCTGAAGCGCATCTTCACGCTATGTCTCAACGACAGAGCGCCCTTAGAGGAGTCGCGA AAATGGGGTATCTACTTTGTTATTAATCTTTTGTTCAAGACCTACTTCAAGCTCAATTCAGCATCGCTATCTCGA ACAATCCTCAAGACCCTGGCCGTATACAACGACAAGGGAGACATGCCCCCGTTGGAGAGCTTCCCGAAAGGCCAG AGAGTGACATTCAAATACTACGAGGGCGTACTCTTCTTTCTCGAGGAGAATTATGTTCAGGCCGAGAAGCATCTC ATCGAGGCCTGGCAACTCTGTCACAGAGACGCCAAGGCAAACTTGGAGCGCATCTTGACGTATCTAATTCCCTGC AGGCTGCTGACGAGCCATGCACTCCCGACCAAGCAGTTACTGGAGCCATATCCTCGACTTCAGCAGTTATTTTTG CCTCTAGCGCAGTGCATTCGACGAGGTGACCTCCGTGCCTTTGACTTGGCCCTGCAAGAGGGCGAGGACGAATTC GTCAAGCGACGTATATACCTAACGCTCGAGCGGGGACGAGACATCGCACTCCGGAATCTCTTGCGCAAAGTCTTC ATTGCCGGCGGATTCGATGAGCCCAAGGAAGCAGACACAGCGCCGGTGCGACGAACCCGCGTGCCTGTAGTCGAG TTCCGCGCGGCCCTCTGCATGGGCAGCGGCGGAGAATTGATAGACACGGATGAGGTTGAGTGTCTTCTGGCCAAC ATGATCTACAAGGACCTTATGAAAGGTTACATCGCACGGGAGCGAGGGATCGTCGTGTTGTCCAAAAAAGGGGCT TTCCCGGGAACCGGGGTATGA |
| Transcript | >Hirsu2|2289 ATGAATGAGCTATTCGAGGGGTTCGCGCATGCGCATGCCATTCAAAATGGCTACTTCCTCGCCCAGACGCTCTCA CCAGTCCCACCGCTCAACGATCCCCACAGGCTCAGGAGAATCTGGCAGAGCACTAATGCCCACAGTGCTAAGGGA GACATCAAACACTTCATCAAGGCGCAGACGCCCCATCGACGAGGCCTCAGTAATGATGAGATAAACGGCTGGGTG GAAGTGTATGCGACATACTGGAAAGCTCTCGGTGAAATTGTAGCCGGTGAGGATGGAAAGTCTTCATGGACCAAG GCCTACGAGTCTTGGAGAGACCTGACCTCGATCCTGATCCGAGGCTACAACAACCACGGCTTCGAAACCTGGACT ATCCCCAGCCTGTACGTGGTGGGAAAGTACCTGAGGTTATTCGCCATCAAGTCCGACGAGGAGCGCAGCCGTACC AATACAGGCCCTGCTACTGGTGCCGCCATCATGCAGGACGACTTCGACCCAGAATCGGAGAAACACGCACAGCTG AGAGACTGTGAGCAACATCTGAAGCGCATCTTCACGCTATGTCTCAACGACAGAGCGCCCTTAGAGGAGTCGCGA AAATGGGGTATCTACTTTGTTATTAATCTTTTGTTCAAGACCTACTTCAAGCTCAATTCAGCATCGCTATCTCGA ACAATCCTCAAGACCCTGGCCGTATACAACGACAAGGGAGACATGCCCCCGTTGGAGAGCTTCCCGAAAGGCCAG AGAGTGACATTCAAATACTACGAGGGCGTACTCTTCTTTCTCGAGGAGAATTATGTTCAGGCCGAGAAGCATCTC ATCGAGGCCTGGCAACTCTGTCACAGAGACGCCAAGGCAAACTTGGAGCGCATCTTGACGTATCTAATTCCCTGC AGGCTGCTGACGAGCCATGCACTCCCGACCAAGCAGTTACTGGAGCCATATCCTCGACTTCAGCAGTTATTTTTG CCTCTAGCGCAGTGCATTCGACGAGGTGACCTCCGTGCCTTTGACTTGGCCCTGCAAGAGGGCGAGGACGAATTC GTCAAGCGACGTATATACCTAACGCTCGAGCGGGGACGAGACATCGCACTCCGGAATCTCTTGCGCAAAGTCTTC ATTGCCGGCGGATTCGATGAGCCCAAGGAAGCAGACACAGCGCCGGTGCGACGAACCCGCGTGCCTGTAGTCGAG TTCCGCGCGGCCCTCTGCATGGGCAGCGGCGGAGAATTGATAGACACGGATGAGGTTGAGTGTCTTCTGGCCAAC ATGATCTACAAGGACCTTATGAAAGGTTACATCGCACGGGAGCGAGGGATCGTCGTGTTGTCCAAAAAAGGGGCT TTCCCGGGAACCGGGGTATGA |
| Gene | >Hirsu2|2289 ATGAATGAGCTATTCGAGGGGTTCGCGCATGCGCATGCCATTCAAAATGGCTACTTCCTCGCCCAGACGCTCTCA CCAGTCCCACCGCTCAACGATCCCCACAGGCTCAGGAGAATCTGGCAGAGCACTAATGCCCACAGTGCTAAGGGA GACATCAAACACTTCATCAAGGCGCAGACGCCCCATCGACGAGGCCTCAGTAATGATGAGATAAACGGCTGGGTG GAAGTGTATGCGACATACTGGAAAGCTCTCGGTGAAATTGTAGCCGGTGAGGATGGAAAGGTCGGTTGCCGCCAG CCTATCGACGAGCTGGCAGCTGGTTTCTAACCTGAACTGTCCCACCTCAGTCTTCATGGACCAAGGCCTACGAGT CTTGGAGAGACCTGACCTCGATCCTGATCCGAGGCTACAACAACCACGGCTTCGAAACCTGGACTATCCCCAGCC TGTACGTGGTGGGAAAGTACCTGAGGTTATTCGCCATCAAGTCCGACGAGGAGCGCAGCCGTACCAATACAGGCC CTGCTACTGGTGCCGCCATCATGCAGGACGACTTCGACCCAGAATCGGAGAAACACGCACAGCTGAGAGACTGTG AGCAACATCTGAAGCGCATCTTCACGCTATGTCTCAACGACAGGTGACTGAGTCTTTAATCGGGAACATCTCAGG GAAAGCCAGCTGACAGTGATCACAGAGCGCCCTTAGAGGAGTCGCGAAAATGGGGTATCTACTTTGTTATTAATC TTTTGTTCAAGACCTACTTCAAGCTCAATTCAGCATCGCTATCTCGAACAATCCTCAAGACCCTGGCCGTATACA ACGACAAGGGAGACATGCCCCCGTTGGAGAGCTTCCCGAAAGGCCAGAGAGTGACATTCAAATACTACGAGGGCG TACTCTTCTTTCTCGAGGAGAATTATGTTCAGGTAGGCCCCCCATCCTCGCAGCCATCAAAGTCGACACGGCTAA ACCAGCACGATTAGGCCGAGAAGCATCTCATCGAGGCCTGGCAACTCTGTCACAGAGACGCCAAGGCAAACTTGG AGTACGCGCGTCCACGACGCAAACCAGCCGCTCACCGCGCTGACACTGAGCAGGCGCATCTTGACGTATCTAATT CCCTGCAGGCTGCTGACGAGCCATGCACTCCCGACCAAGCAGTTACTGGAGCCATATCCTCGACTTCAGCAGTTA TTTTTGCCTCTAGCGCAGTGCATTCGACGAGGTGACCTCCGTGCCTTTGACTTGGCCCTGCAAGAGGGCGAGGAC GAATTCGTCAAGCGACGTATATACCTAACGCTCGAGCGGGGACGAGACATCGCACTCCGGAATCTCTTGCGCAAA GTCTTCATTGCCGGCGGATTCGATGAGCCCAAGGAAGCAGACACAGCGCCGGTGCGACGAACCCGCGTGCCTGTA GTCGAGTTCCGCGCGGCCCTCTGCATGGGCAGCGGCGGAGAATTGATAGACACGGATGAGGTTGAGTGTCTTCTG GCCAACATGATCTACAAGGTCGGTAAAGATTTTCTACGATGCTGTCTCCGGCGGATGAATTGGCAGTACTTTCTG GCGGAGCTTATACCTTTCTCTCGCTCCTCTTGACTCGTGCAGCCCTATGACTTGACCAAGGCGTCCCTTTCATCC CCATAAGAGGAGCCTTGCTAAGCCGGAACTCCGCCCTCATCAACAACTTGTCGTATATCGAGCATCGATGAGCAG TTGAGAGACATAATTGGCTGACACGCATCATCATGTCCAGGACCTTATGAAAGGTTACATCGCACGGGAGCGAGG GATCGTCGTGTTGTCCAAAAAAGGGGCTTTCCCGGGAACCGGGGTATGA |