Protein ID | Hirsu2|2283 |
Gene name | |
Location | Contig_1536:72..1737 |
Strand | + |
Gene length (bp) | 1665 |
Transcript length (bp) | 1665 |
Coding sequence length (bp) | 1665 |
Protein length (aa) | 555 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.5388 | 0.8613 | 0.0296 | 0.0432 | 0.1569 | 0.0038 | 0.0467 | 0.0766 | 0.0763 | 0.0033 |
Orthofinder run ID | 4 |
Orthogroup | 2021 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2283 MLLGWNALCSFQVRRATCYIGLAGRIAGEIKEQISSTAAPMTSSRINGIDVFDVEKELIAYLYWTTYSLSLWAFI QMGHGHFSALLPTSLTSIFLPVTEASSVIIQLDLVSENFSTLQKQKSVIREMWPLAHIASVIAYIFALYPQDADV SDSPTTSFWQEAPLLALQRIQQGKPSQGIACVCREINRVLMESIHILNRQVTEVSSRSLVLLVYHTMAIHFLFPL LPPGQRDEGIAADVLERFCASATEIMHIFDLVSEQPQDLFSVTPSLRSSFPDVFCLALDTCARAMSLIDTRKKMG AVLVEAPMMHAYDGRLQALAHGLYAMSQDDFLNQGRSLRMVRKRLKACVRTLTGSRPGSNSNSSGVPSPDHARGC GSMPHTPIHSPAVGVLDLAPTSSSFVSPMDTTTNGTTTPMTTTTIATPPTSVPASVHSSSEASSRSSAPYSPDLQ KADWHASDDLFRNLLDPGAAHGGGAGAGDHYSVSDLVDLVDLEHAWYPQMTGVMDIDMSGSMSGAQWEWPEVGGV DATTTTAATASDMESVLYYFENGHNKRSC* |
Coding | >Hirsu2|2283 ATGCTCCTCGGCTGGAACGCCCTGTGCTCCTTTCAGGTCCGGCGCGCCACCTGCTACATCGGGCTCGCCGGCCGC ATCGCGGGCGAGATCAAGGAGCAGATCTCGAGCACGGCGGCGCCCATGACGTCGAGCCGCATCAACGGCATCGAC GTCTTCGACGTGGAGAAGGAGCTCATCGCCTACCTCTACTGGACCACCTACTCGCTCAGCCTCTGGGCCTTCATC CAGATGGGCCACGGCCACTTCTCGGCCCTGCTGCCGACGTCGCTCACCTCCATCTTCCTGCCGGTGACGGAGGCG TCGTCCGTCATCATCCAGCTCGACCTCGTGTCGGAGAACTTCAGCACGCTGCAGAAGCAGAAGAGTGTGATCCGC GAGATGTGGCCGCTGGCCCACATCGCCAGCGTCATCGCCTACATCTTCGCCCTCTACCCGCAGGACGCCGACGTG AGCGACTCGCCCACGACCAGCTTCTGGCAGGAGGCGCCCCTGCTCGCGCTGCAGCGGATCCAGCAGGGCAAGCCG TCGCAGGGCATCGCCTGCGTCTGCCGCGAGATCAACCGGGTGCTGATGGAGAGCATCCACATCCTCAACCGGCAG GTGACCGAGGTCTCGTCCCGCAGCCTCGTCCTGCTCGTCTACCACACCATGGCCATCCACTTCCTCTTCCCGCTG CTGCCGCCGGGCCAGCGCGACGAGGGCATCGCGGCCGACGTGCTGGAGCGCTTCTGCGCCTCGGCCACCGAGATC ATGCACATCTTCGACCTCGTCTCGGAGCAGCCGCAGGACCTGTTCAGCGTCACGCCCTCGCTCCGCTCCTCCTTC CCGGACGTCTTCTGCCTCGCCCTCGACACGTGCGCGCGCGCCATGAGCCTCATCGACACGCGCAAGAAGATGGGC GCGGTGCTGGTCGAGGCGCCCATGATGCACGCCTACGACGGCCGGCTGCAGGCCCTCGCCCACGGGCTCTACGCC ATGAGCCAGGACGACTTCCTCAACCAGGGCCGGTCGCTGCGCATGGTGCGCAAGCGGCTCAAGGCCTGCGTCCGG ACCCTGACCGGGTCGCGGCCCGGCTCCAACTCGAACTCGTCGGGCGTGCCGTCGCCCGACCACGCGCGCGGCTGC GGCTCCATGCCGCACACGCCCATCCACAGCCCGGCCGTCGGCGTCCTCGACCTGGCCCCGACCTCGTCGTCGTTC GTCTCGCCCATGGACACGACGACGAACGGGACGACGACGCCGATGACGACGACGACGATCGCGACGCCGCCCACC TCGGTGCCGGCCTCGGTGCACTCGTCGTCGGAGGCGTCGTCGAGGAGCTCGGCCCCCTACAGTCCCGACCTGCAA AAGGCCGACTGGCACGCGTCCGACGACCTGTTCCGCAACCTGCTCGACCCGGGCGCCGCCCACGGCGGCGGCGCG GGCGCGGGCGACCACTACAGCGTGTCGGACCTGGTGGACCTGGTGGACCTGGAGCACGCCTGGTACCCGCAGATG ACGGGCGTCATGGACATCGACATGTCCGGCTCCATGTCCGGGGCGCAGTGGGAGTGGCCCGAGGTCGGCGGCGTG GACGCGACGACGACGACGGCCGCCACGGCCTCGGACATGGAGTCGGTCCTCTACTACTTCGAGAACGGACACAAC AAGAGATCCTGCTGA |
Transcript | >Hirsu2|2283 ATGCTCCTCGGCTGGAACGCCCTGTGCTCCTTTCAGGTCCGGCGCGCCACCTGCTACATCGGGCTCGCCGGCCGC ATCGCGGGCGAGATCAAGGAGCAGATCTCGAGCACGGCGGCGCCCATGACGTCGAGCCGCATCAACGGCATCGAC GTCTTCGACGTGGAGAAGGAGCTCATCGCCTACCTCTACTGGACCACCTACTCGCTCAGCCTCTGGGCCTTCATC CAGATGGGCCACGGCCACTTCTCGGCCCTGCTGCCGACGTCGCTCACCTCCATCTTCCTGCCGGTGACGGAGGCG TCGTCCGTCATCATCCAGCTCGACCTCGTGTCGGAGAACTTCAGCACGCTGCAGAAGCAGAAGAGTGTGATCCGC GAGATGTGGCCGCTGGCCCACATCGCCAGCGTCATCGCCTACATCTTCGCCCTCTACCCGCAGGACGCCGACGTG AGCGACTCGCCCACGACCAGCTTCTGGCAGGAGGCGCCCCTGCTCGCGCTGCAGCGGATCCAGCAGGGCAAGCCG TCGCAGGGCATCGCCTGCGTCTGCCGCGAGATCAACCGGGTGCTGATGGAGAGCATCCACATCCTCAACCGGCAG GTGACCGAGGTCTCGTCCCGCAGCCTCGTCCTGCTCGTCTACCACACCATGGCCATCCACTTCCTCTTCCCGCTG CTGCCGCCGGGCCAGCGCGACGAGGGCATCGCGGCCGACGTGCTGGAGCGCTTCTGCGCCTCGGCCACCGAGATC ATGCACATCTTCGACCTCGTCTCGGAGCAGCCGCAGGACCTGTTCAGCGTCACGCCCTCGCTCCGCTCCTCCTTC CCGGACGTCTTCTGCCTCGCCCTCGACACGTGCGCGCGCGCCATGAGCCTCATCGACACGCGCAAGAAGATGGGC GCGGTGCTGGTCGAGGCGCCCATGATGCACGCCTACGACGGCCGGCTGCAGGCCCTCGCCCACGGGCTCTACGCC ATGAGCCAGGACGACTTCCTCAACCAGGGCCGGTCGCTGCGCATGGTGCGCAAGCGGCTCAAGGCCTGCGTCCGG ACCCTGACCGGGTCGCGGCCCGGCTCCAACTCGAACTCGTCGGGCGTGCCGTCGCCCGACCACGCGCGCGGCTGC GGCTCCATGCCGCACACGCCCATCCACAGCCCGGCCGTCGGCGTCCTCGACCTGGCCCCGACCTCGTCGTCGTTC GTCTCGCCCATGGACACGACGACGAACGGGACGACGACGCCGATGACGACGACGACGATCGCGACGCCGCCCACC TCGGTGCCGGCCTCGGTGCACTCGTCGTCGGAGGCGTCGTCGAGGAGCTCGGCCCCCTACAGTCCCGACCTGCAA AAGGCCGACTGGCACGCGTCCGACGACCTGTTCCGCAACCTGCTCGACCCGGGCGCCGCCCACGGCGGCGGCGCG GGCGCGGGCGACCACTACAGCGTGTCGGACCTGGTGGACCTGGTGGACCTGGAGCACGCCTGGTACCCGCAGATG ACGGGCGTCATGGACATCGACATGTCCGGCTCCATGTCCGGGGCGCAGTGGGAGTGGCCCGAGGTCGGCGGCGTG GACGCGACGACGACGACGGCCGCCACGGCCTCGGACATGGAGTCGGTCCTCTACTACTTCGAGAACGGACACAAC AAGAGATCCTGCTGA |
Gene | >Hirsu2|2283 ATGCTCCTCGGCTGGAACGCCCTGTGCTCCTTTCAGGTCCGGCGCGCCACCTGCTACATCGGGCTCGCCGGCCGC ATCGCGGGCGAGATCAAGGAGCAGATCTCGAGCACGGCGGCGCCCATGACGTCGAGCCGCATCAACGGCATCGAC GTCTTCGACGTGGAGAAGGAGCTCATCGCCTACCTCTACTGGACCACCTACTCGCTCAGCCTCTGGGCCTTCATC CAGATGGGCCACGGCCACTTCTCGGCCCTGCTGCCGACGTCGCTCACCTCCATCTTCCTGCCGGTGACGGAGGCG TCGTCCGTCATCATCCAGCTCGACCTCGTGTCGGAGAACTTCAGCACGCTGCAGAAGCAGAAGAGTGTGATCCGC GAGATGTGGCCGCTGGCCCACATCGCCAGCGTCATCGCCTACATCTTCGCCCTCTACCCGCAGGACGCCGACGTG AGCGACTCGCCCACGACCAGCTTCTGGCAGGAGGCGCCCCTGCTCGCGCTGCAGCGGATCCAGCAGGGCAAGCCG TCGCAGGGCATCGCCTGCGTCTGCCGCGAGATCAACCGGGTGCTGATGGAGAGCATCCACATCCTCAACCGGCAG GTGACCGAGGTCTCGTCCCGCAGCCTCGTCCTGCTCGTCTACCACACCATGGCCATCCACTTCCTCTTCCCGCTG CTGCCGCCGGGCCAGCGCGACGAGGGCATCGCGGCCGACGTGCTGGAGCGCTTCTGCGCCTCGGCCACCGAGATC ATGCACATCTTCGACCTCGTCTCGGAGCAGCCGCAGGACCTGTTCAGCGTCACGCCCTCGCTCCGCTCCTCCTTC CCGGACGTCTTCTGCCTCGCCCTCGACACGTGCGCGCGCGCCATGAGCCTCATCGACACGCGCAAGAAGATGGGC GCGGTGCTGGTCGAGGCGCCCATGATGCACGCCTACGACGGCCGGCTGCAGGCCCTCGCCCACGGGCTCTACGCC ATGAGCCAGGACGACTTCCTCAACCAGGGCCGGTCGCTGCGCATGGTGCGCAAGCGGCTCAAGGCCTGCGTCCGG ACCCTGACCGGGTCGCGGCCCGGCTCCAACTCGAACTCGTCGGGCGTGCCGTCGCCCGACCACGCGCGCGGCTGC GGCTCCATGCCGCACACGCCCATCCACAGCCCGGCCGTCGGCGTCCTCGACCTGGCCCCGACCTCGTCGTCGTTC GTCTCGCCCATGGACACGACGACGAACGGGACGACGACGCCGATGACGACGACGACGATCGCGACGCCGCCCACC TCGGTGCCGGCCTCGGTGCACTCGTCGTCGGAGGCGTCGTCGAGGAGCTCGGCCCCCTACAGTCCCGACCTGCAA AAGGCCGACTGGCACGCGTCCGACGACCTGTTCCGCAACCTGCTCGACCCGGGCGCCGCCCACGGCGGCGGCGCG GGCGCGGGCGACCACTACAGCGTGTCGGACCTGGTGGACCTGGTGGACCTGGAGCACGCCTGGTACCCGCAGATG ACGGGCGTCATGGACATCGACATGTCCGGCTCCATGTCCGGGGCGCAGTGGGAGTGGCCCGAGGTCGGCGGCGTG GACGCGACGACGACGACGGCCGCCACGGCCTCGGACATGGAGTCGGTCCTCTACTACTTCGAGAACGGACACAAC AAGAGATCCTGCTGA |