Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2279
Gene name
LocationContig_1533:5245..5986
Strand-
Gene length (bp)741
Transcript length (bp)741
Coding sequence length (bp)741
Protein length (aa) 247

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5199 0.6232 0.4688 0.0371 0.1587 0.0835 0.2285 0.176 0.1204 0.0552

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9026
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|2279 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2279
MCTTCRRPRSVSTCRTGTPLAHPPSHCRPGSRPETRNHSAPSVFYLPHPHHNAPHPIPILSYRASSLRPLVPGPS
HQQVQSALLSVVPAKASITISSSTLVSDHALPLTRLTTPEPRRHPEPPSSSSCLDASASSYVRATNILLPALRPL
LLLSFPSSLHPVLLPARKPTLGRTYIPSPLRSVATAPPACPPLHSRRASNLPTTTHDFALSLMTTPDSPEPRDGQ
HQSHLSLCPDLALRIRPSTAE*
Coding >Hirsu2|2279
ATGTGTACTACTTGCCGGCGCCCTCGCAGCGTATCTACATGCCGCACAGGTACCCCGCTGGCTCATCCACCATCC
CACTGCAGGCCGGGATCGCGCCCTGAGACTCGGAACCACAGCGCCCCGTCCGTCTTCTACCTCCCTCACCCTCAC
CACAACGCACCTCATCCCATCCCCATCCTATCTTATCGAGCTTCGTCCCTGCGCCCTCTCGTCCCCGGGCCGTCT
CACCAACAAGTGCAGTCTGCTCTGCTCTCCGTCGTCCCGGCCAAGGCGAGCATCACCATCTCGTCTTCAACGCTC
GTGTCCGACCACGCTCTCCCCCTCACTCGACTTACAACGCCGGAGCCTCGTCGCCATCCGGAACCGCCTTCCAGC
TCTTCTTGCCTCGACGCCTCTGCCTCCTCGTACGTGCGCGCAACAAACATCCTTCTTCCCGCGCTGCGGCCTCTA
CTACTTCTCTCCTTCCCGTCTTCTCTCCATCCTGTCCTTCTCCCGGCGCGCAAGCCCACCTTGGGGCGCACATAC
ATTCCATCGCCACTGCGTTCCGTCGCGACCGCTCCTCCCGCATGCCCTCCCCTTCATTCCAGACGCGCCTCGAAC
CTCCCGACCACAACACATGACTTTGCCCTCTCGCTGATGACGACCCCTGACTCTCCAGAACCTCGCGACGGGCAA
CACCAGTCCCATCTCAGCCTTTGTCCCGACCTCGCTCTGCGAATCCGCCCCAGCACAGCCGAATAG
Transcript >Hirsu2|2279
ATGTGTACTACTTGCCGGCGCCCTCGCAGCGTATCTACATGCCGCACAGGTACCCCGCTGGCTCATCCACCATCC
CACTGCAGGCCGGGATCGCGCCCTGAGACTCGGAACCACAGCGCCCCGTCCGTCTTCTACCTCCCTCACCCTCAC
CACAACGCACCTCATCCCATCCCCATCCTATCTTATCGAGCTTCGTCCCTGCGCCCTCTCGTCCCCGGGCCGTCT
CACCAACAAGTGCAGTCTGCTCTGCTCTCCGTCGTCCCGGCCAAGGCGAGCATCACCATCTCGTCTTCAACGCTC
GTGTCCGACCACGCTCTCCCCCTCACTCGACTTACAACGCCGGAGCCTCGTCGCCATCCGGAACCGCCTTCCAGC
TCTTCTTGCCTCGACGCCTCTGCCTCCTCGTACGTGCGCGCAACAAACATCCTTCTTCCCGCGCTGCGGCCTCTA
CTACTTCTCTCCTTCCCGTCTTCTCTCCATCCTGTCCTTCTCCCGGCGCGCAAGCCCACCTTGGGGCGCACATAC
ATTCCATCGCCACTGCGTTCCGTCGCGACCGCTCCTCCCGCATGCCCTCCCCTTCATTCCAGACGCGCCTCGAAC
CTCCCGACCACAACACATGACTTTGCCCTCTCGCTGATGACGACCCCTGACTCTCCAGAACCTCGCGACGGGCAA
CACCAGTCCCATCTCAGCCTTTGTCCCGACCTCGCTCTGCGAATCCGCCCCAGCACAGCCGAATAG
Gene >Hirsu2|2279
ATGTGTACTACTTGCCGGCGCCCTCGCAGCGTATCTACATGCCGCACAGGTACCCCGCTGGCTCATCCACCATCC
CACTGCAGGCCGGGATCGCGCCCTGAGACTCGGAACCACAGCGCCCCGTCCGTCTTCTACCTCCCTCACCCTCAC
CACAACGCACCTCATCCCATCCCCATCCTATCTTATCGAGCTTCGTCCCTGCGCCCTCTCGTCCCCGGGCCGTCT
CACCAACAAGTGCAGTCTGCTCTGCTCTCCGTCGTCCCGGCCAAGGCGAGCATCACCATCTCGTCTTCAACGCTC
GTGTCCGACCACGCTCTCCCCCTCACTCGACTTACAACGCCGGAGCCTCGTCGCCATCCGGAACCGCCTTCCAGC
TCTTCTTGCCTCGACGCCTCTGCCTCCTCGTACGTGCGCGCAACAAACATCCTTCTTCCCGCGCTGCGGCCTCTA
CTACTTCTCTCCTTCCCGTCTTCTCTCCATCCTGTCCTTCTCCCGGCGCGCAAGCCCACCTTGGGGCGCACATAC
ATTCCATCGCCACTGCGTTCCGTCGCGACCGCTCCTCCCGCATGCCCTCCCCTTCATTCCAGACGCGCCTCGAAC
CTCCCGACCACAACACATGACTTTGCCCTCTCGCTGATGACGACCCCTGACTCTCCAGAACCTCGCGACGGGCAA
CACCAGTCCCATCTCAGCCTTTGTCCCGACCTCGCTCTGCGAATCCGCCCCAGCACAGCCGAATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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