Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2276
Gene name
LocationContig_1531:3805..4873
Strand+
Gene length (bp)1068
Transcript length (bp)1068
Coding sequence length (bp)1068
Protein length (aa) 356

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 107 129 22
2 144 166 22
3 221 243 22
4 258 280 22
5 292 314 22
6 324 346 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2276
MDSTVAYRMSLVLPPQTPGGGGPRYRVSTSGRPATMLRPQTFWPVDWPAMRQMYESEQTSQPFPDGYDGKPLALP
TETEVAAEEDEYGLAEGVRRMLTVFPYRDASWVPAMLFVFGTTAIFVASFFKLMPVVDPGSVFPGEAEVALPVTI
AVGAAALISGGGLSILAAFNVNRGPVPVDKAGRPVPGAYHPALLGSREWVWFPGLAELGADFLPNLAFRGGFVAW
CGGMTLGVAAVSGLPGVLDPKAADFPRKIDTFILTPLLVGASFIFTGSLMLALASQDRWYKPAVASVAWHASFAN
VLAAACLAASASLGLFAKPRLLLAATANSLAGVFFLIGALLQWFVVMKLFPPNPD*
Coding >Hirsu2|2276
ATGGACAGCACGGTGGCGTACCGGATGTCGCTGGTGCTGCCGCCGCAGACGCCCGGCGGCGGCGGCCCGCGGTAC
CGGGTGTCGACGAGCGGGCGGCCGGCGACGATGCTGCGGCCGCAGACCTTCTGGCCCGTCGACTGGCCGGCGATG
AGGCAGATGTACGAGTCGGAGCAGACGTCGCAGCCGTTCCCGGACGGGTACGACGGCAAGCCGCTGGCGCTGCCG
ACGGAGACGGAGGTGGCGGCGGAGGAGGACGAGTACGGGCTGGCGGAGGGGGTGCGGCGGATGCTGACCGTGTTC
CCCTACCGCGACGCGTCGTGGGTGCCGGCGATGCTGTTCGTCTTCGGCACCACGGCCATCTTCGTCGCCTCCTTC
TTCAAGCTGATGCCCGTCGTCGACCCCGGGTCCGTGTTCCCGGGCGAGGCCGAGGTGGCGCTGCCGGTGACCATC
GCCGTCGGCGCCGCGGCCCTCATCTCCGGCGGCGGCCTGTCCATCCTGGCCGCCTTCAACGTCAACCGCGGGCCG
GTGCCGGTCGACAAGGCCGGCCGCCCCGTGCCGGGCGCCTACCACCCGGCCCTGCTCGGCAGCCGCGAGTGGGTC
TGGTTCCCGGGCCTGGCCGAGCTCGGCGCCGACTTCCTGCCCAACCTGGCCTTCCGCGGCGGCTTCGTCGCCTGG
TGCGGCGGCATGACGCTCGGCGTCGCCGCCGTCTCCGGCCTGCCGGGCGTGCTCGACCCCAAGGCCGCCGACTTC
CCGCGCAAGATCGACACCTTCATCCTGACCCCGCTGCTCGTCGGCGCCTCCTTCATCTTCACCGGCTCGCTCATG
CTCGCCCTCGCCTCCCAGGACCGCTGGTACAAGCCGGCCGTCGCCTCCGTCGCCTGGCACGCCTCCTTCGCCAAC
GTCCTGGCCGCCGCCTGCCTGGCCGCCTCGGCCTCGCTCGGCCTCTTCGCCAAGCCGCGCCTGCTGCTGGCCGCC
ACCGCAAACTCCCTCGCCGGCGTCTTCTTCCTCATCGGCGCCCTGCTGCAGTGGTTCGTCGTCATGAAGCTGTTC
CCCCCCAACCCCGACTGA
Transcript >Hirsu2|2276
ATGGACAGCACGGTGGCGTACCGGATGTCGCTGGTGCTGCCGCCGCAGACGCCCGGCGGCGGCGGCCCGCGGTAC
CGGGTGTCGACGAGCGGGCGGCCGGCGACGATGCTGCGGCCGCAGACCTTCTGGCCCGTCGACTGGCCGGCGATG
AGGCAGATGTACGAGTCGGAGCAGACGTCGCAGCCGTTCCCGGACGGGTACGACGGCAAGCCGCTGGCGCTGCCG
ACGGAGACGGAGGTGGCGGCGGAGGAGGACGAGTACGGGCTGGCGGAGGGGGTGCGGCGGATGCTGACCGTGTTC
CCCTACCGCGACGCGTCGTGGGTGCCGGCGATGCTGTTCGTCTTCGGCACCACGGCCATCTTCGTCGCCTCCTTC
TTCAAGCTGATGCCCGTCGTCGACCCCGGGTCCGTGTTCCCGGGCGAGGCCGAGGTGGCGCTGCCGGTGACCATC
GCCGTCGGCGCCGCGGCCCTCATCTCCGGCGGCGGCCTGTCCATCCTGGCCGCCTTCAACGTCAACCGCGGGCCG
GTGCCGGTCGACAAGGCCGGCCGCCCCGTGCCGGGCGCCTACCACCCGGCCCTGCTCGGCAGCCGCGAGTGGGTC
TGGTTCCCGGGCCTGGCCGAGCTCGGCGCCGACTTCCTGCCCAACCTGGCCTTCCGCGGCGGCTTCGTCGCCTGG
TGCGGCGGCATGACGCTCGGCGTCGCCGCCGTCTCCGGCCTGCCGGGCGTGCTCGACCCCAAGGCCGCCGACTTC
CCGCGCAAGATCGACACCTTCATCCTGACCCCGCTGCTCGTCGGCGCCTCCTTCATCTTCACCGGCTCGCTCATG
CTCGCCCTCGCCTCCCAGGACCGCTGGTACAAGCCGGCCGTCGCCTCCGTCGCCTGGCACGCCTCCTTCGCCAAC
GTCCTGGCCGCCGCCTGCCTGGCCGCCTCGGCCTCGCTCGGCCTCTTCGCCAAGCCGCGCCTGCTGCTGGCCGCC
ACCGCAAACTCCCTCGCCGGCGTCTTCTTCCTCATCGGCGCCCTGCTGCAGTGGTTCGTCGTCATGAAGCTGTTC
CCCCCCAACCCCGACTGA
Gene >Hirsu2|2276
ATGGACAGCACGGTGGCGTACCGGATGTCGCTGGTGCTGCCGCCGCAGACGCCCGGCGGCGGCGGCCCGCGGTAC
CGGGTGTCGACGAGCGGGCGGCCGGCGACGATGCTGCGGCCGCAGACCTTCTGGCCCGTCGACTGGCCGGCGATG
AGGCAGATGTACGAGTCGGAGCAGACGTCGCAGCCGTTCCCGGACGGGTACGACGGCAAGCCGCTGGCGCTGCCG
ACGGAGACGGAGGTGGCGGCGGAGGAGGACGAGTACGGGCTGGCGGAGGGGGTGCGGCGGATGCTGACCGTGTTC
CCCTACCGCGACGCGTCGTGGGTGCCGGCGATGCTGTTCGTCTTCGGCACCACGGCCATCTTCGTCGCCTCCTTC
TTCAAGCTGATGCCCGTCGTCGACCCCGGGTCCGTGTTCCCGGGCGAGGCCGAGGTGGCGCTGCCGGTGACCATC
GCCGTCGGCGCCGCGGCCCTCATCTCCGGCGGCGGCCTGTCCATCCTGGCCGCCTTCAACGTCAACCGCGGGCCG
GTGCCGGTCGACAAGGCCGGCCGCCCCGTGCCGGGCGCCTACCACCCGGCCCTGCTCGGCAGCCGCGAGTGGGTC
TGGTTCCCGGGCCTGGCCGAGCTCGGCGCCGACTTCCTGCCCAACCTGGCCTTCCGCGGCGGCTTCGTCGCCTGG
TGCGGCGGCATGACGCTCGGCGTCGCCGCCGTCTCCGGCCTGCCGGGCGTGCTCGACCCCAAGGCCGCCGACTTC
CCGCGCAAGATCGACACCTTCATCCTGACCCCGCTGCTCGTCGGCGCCTCCTTCATCTTCACCGGCTCGCTCATG
CTCGCCCTCGCCTCCCAGGACCGCTGGTACAAGCCGGCCGTCGCCTCCGTCGCCTGGCACGCCTCCTTCGCCAAC
GTCCTGGCCGCCGCCTGCCTGGCCGCCTCGGCCTCGCTCGGCCTCTTCGCCAAGCCGCGCCTGCTGCTGGCCGCC
ACCGCAAACTCCCTCGCCGGCGTCTTCTTCCTCATCGGCGCCCTGCTGCAGTGGTTCGTCGTCATGAAGCTGTTC
CCCCCCAACCCCGACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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