Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2274
Gene name
LocationContig_1531:112..533
Strand+
Gene length (bp)421
Transcript length (bp)342
Coding sequence length (bp)342
Protein length (aa) 114

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.4218 0.7468 0.2862 0.0807 0.1398 0.1231 0.1299 0.1361 0.0913 0.0222

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4988
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4511
Ophiocordyceps camponoti-floridani Ophcf2|03893
Ophiocordyceps camponoti-rufipedis Ophun1|4837
Ophiocordyceps kimflemingae Ophio5|7202
Ophiocordyceps subramaniannii Hirsu2|2274 (this protein)
Ophiocordyceps subramaniannii Hirsu2|256

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2274
MEQESKMEWTPLPASDPQPSAQRVEQRRDKEKTRPSHSSIYEIQPDQAKPSTAAAEAAAAPPETFRVGSSTAEVF
STLFGKSQSRGSVNWVAFEAAMAELGFSVMPKYGSRGT*
Coding >Hirsu2|2274
ATGGAGCAGGAAAGCAAGATGGAGTGGACTCCGCTCCCCGCCTCGGATCCGCAGCCATCGGCGCAGCGAGTAGAG
CAGCGGAGAGACAAGGAAAAGACGCGGCCTTCTCACTCCTCCATTTACGAAATCCAACCAGACCAAGCGAAGCCT
TCGACCGCGGCAGCCGAGGCGGCCGCCGCGCCGCCCGAGACCTTCCGAGTGGGCTCCTCGACAGCCGAGGTCTTC
TCGACGCTGTTCGGCAAGTCGCAGTCACGAGGCTCCGTCAACTGGGTCGCGTTCGAAGCCGCCATGGCGGAGCTG
GGCTTCTCGGTGATGCCCAAGTACGGTTCGAGGGGTACTTGA
Transcript >Hirsu2|2274
ATGGAGCAGGAAAGCAAGATGGAGTGGACTCCGCTCCCCGCCTCGGATCCGCAGCCATCGGCGCAGCGAGTAGAG
CAGCGGAGAGACAAGGAAAAGACGCGGCCTTCTCACTCCTCCATTTACGAAATCCAACCAGACCAAGCGAAGCCT
TCGACCGCGGCAGCCGAGGCGGCCGCCGCGCCGCCCGAGACCTTCCGAGTGGGCTCCTCGACAGCCGAGGTCTTC
TCGACGCTGTTCGGCAAGTCGCAGTCACGAGGCTCCGTCAACTGGGTCGCGTTCGAAGCCGCCATGGCGGAGCTG
GGCTTCTCGGTGATGCCCAAGTACGGTTCGAGGGGTACTTGA
Gene >Hirsu2|2274
ATGGAGCAGGAAAGCAAGATGGAGTGGACTCCGCTCCCCGCCTCGGATCCGCAGCCATCGGCGCAGCGAGTAGAG
CAGCGGAGAGACAAGGAAAAGACGCGGCCTTCTCACTCCTCCATTTACGAAATCCAACCAGACCAAGCGAAGCCT
TCGACCGCGGCAGCCGAGGCGGCCGCCGCGCCGCCCGAGACCTTCCGAGTGGGCTCCTCGACAGCCGAGGTCTTC
TCGACGCTGTTCGGCAAGTCGCAGTCACGAGGCTCCGTCAACTGGGTCGCGTTCGAAGCCGCCATGGCGGAGCTG
GGCTTCTCGGTGATGCCCAAGTACGGTTCGGTATACACTTTCCAGCCGCCTGAATCGTTGACTATCAGAAGACCG
TTCACCGTGCACCGGCCGCACACGTCCCGGATAGAGGGGTACTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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