Protein ID | Hirsu2|2274 |
Gene name | |
Location | Contig_1531:112..533 |
Strand | + |
Gene length (bp) | 421 |
Transcript length (bp) | 342 |
Coding sequence length (bp) | 342 |
Protein length (aa) | 114 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.4218 | 0.7468 | 0.2862 | 0.0807 | 0.1398 | 0.1231 | 0.1299 | 0.1361 | 0.0913 | 0.0222 |
Orthofinder run ID | 4 |
Orthogroup | 4988 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2274 MEQESKMEWTPLPASDPQPSAQRVEQRRDKEKTRPSHSSIYEIQPDQAKPSTAAAEAAAAPPETFRVGSSTAEVF STLFGKSQSRGSVNWVAFEAAMAELGFSVMPKYGSRGT* |
Coding | >Hirsu2|2274 ATGGAGCAGGAAAGCAAGATGGAGTGGACTCCGCTCCCCGCCTCGGATCCGCAGCCATCGGCGCAGCGAGTAGAG CAGCGGAGAGACAAGGAAAAGACGCGGCCTTCTCACTCCTCCATTTACGAAATCCAACCAGACCAAGCGAAGCCT TCGACCGCGGCAGCCGAGGCGGCCGCCGCGCCGCCCGAGACCTTCCGAGTGGGCTCCTCGACAGCCGAGGTCTTC TCGACGCTGTTCGGCAAGTCGCAGTCACGAGGCTCCGTCAACTGGGTCGCGTTCGAAGCCGCCATGGCGGAGCTG GGCTTCTCGGTGATGCCCAAGTACGGTTCGAGGGGTACTTGA |
Transcript | >Hirsu2|2274 ATGGAGCAGGAAAGCAAGATGGAGTGGACTCCGCTCCCCGCCTCGGATCCGCAGCCATCGGCGCAGCGAGTAGAG CAGCGGAGAGACAAGGAAAAGACGCGGCCTTCTCACTCCTCCATTTACGAAATCCAACCAGACCAAGCGAAGCCT TCGACCGCGGCAGCCGAGGCGGCCGCCGCGCCGCCCGAGACCTTCCGAGTGGGCTCCTCGACAGCCGAGGTCTTC TCGACGCTGTTCGGCAAGTCGCAGTCACGAGGCTCCGTCAACTGGGTCGCGTTCGAAGCCGCCATGGCGGAGCTG GGCTTCTCGGTGATGCCCAAGTACGGTTCGAGGGGTACTTGA |
Gene | >Hirsu2|2274 ATGGAGCAGGAAAGCAAGATGGAGTGGACTCCGCTCCCCGCCTCGGATCCGCAGCCATCGGCGCAGCGAGTAGAG CAGCGGAGAGACAAGGAAAAGACGCGGCCTTCTCACTCCTCCATTTACGAAATCCAACCAGACCAAGCGAAGCCT TCGACCGCGGCAGCCGAGGCGGCCGCCGCGCCGCCCGAGACCTTCCGAGTGGGCTCCTCGACAGCCGAGGTCTTC TCGACGCTGTTCGGCAAGTCGCAGTCACGAGGCTCCGTCAACTGGGTCGCGTTCGAAGCCGCCATGGCGGAGCTG GGCTTCTCGGTGATGCCCAAGTACGGTTCGGTATACACTTTCCAGCCGCCTGAATCGTTGACTATCAGAAGACCG TTCACCGTGCACCGGCCGCACACGTCCCGGATAGAGGGGTACTTGA |