Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2272
Gene name
LocationContig_1530:3096..3795
Strand+
Gene length (bp)699
Transcript length (bp)630
Coding sequence length (bp)630
Protein length (aa) 210

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.6968 0.6012 0.2089 0.1202 0.0763 0.0126 0.2389 0.1028 0.1681 0.0192

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2017
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3993
Ophiocordyceps australis map64 (Brazil) OphauB2|7457
Ophiocordyceps camponoti-floridani Ophcf2|06241
Ophiocordyceps camponoti-rufipedis Ophun1|5427
Ophiocordyceps kimflemingae Ophio5|3273
Ophiocordyceps subramaniannii Hirsu2|2272 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2272
MCLTTNQFPEQASDSTVVNKINQVLGREKERLYVGLYVRGSTPKMAGGEDEYHWAFLAGPKQHPKSGSRHIMYHA
KEKLVKSGTPPQIRPEWQYVNDSNRAAMLLVRVLVGKIVDHERLERIFKAVPLRTEDANWNCVLWMEDAFRMMVQ
DGGAITTSVQDWASVRDKAMSYVEQKKAAHRFDGKDPSIVFDPAKPATWDMLTDTEMTP*
Coding >Hirsu2|2272
ATGTGCCTGACCACGAACCAGTTCCCTGAGCAGGCCTCGGACTCTACCGTCGTCAACAAAATCAACCAGGTCCTC
GGCCGCGAGAAGGAGCGGCTCTATGTCGGCCTCTACGTGCGCGGAAGCACTCCCAAGATGGCGGGAGGCGAAGAC
GAGTATCACTGGGCCTTCCTCGCCGGCCCCAAGCAGCACCCCAAGTCGGGCAGCCGCCACATCATGTACCACGCC
AAGGAGAAGCTGGTCAAGTCGGGCACCCCTCCGCAGATCCGACCCGAGTGGCAGTACGTCAACGACTCGAACCGG
GCGGCGATGCTCCTCGTCCGCGTCCTCGTCGGCAAGATCGTCGACCACGAGCGGCTCGAGAGGATCTTCAAGGCG
GTGCCGCTCCGCACCGAGGACGCCAACTGGAACTGCGTGCTCTGGATGGAGGATGCCTTCCGCATGATGGTGCAG
GACGGCGGCGCCATCACGACGAGCGTGCAGGACTGGGCCTCGGTCCGCGACAAGGCCATGAGCTACGTCGAGCAG
AAGAAGGCGGCCCACCGGTTCGACGGCAAGGACCCCAGCATCGTCTTCGACCCGGCCAAGCCGGCGACGTGGGAC
ATGCTCACCGACACGGAGATGACTCCGTAG
Transcript >Hirsu2|2272
ATGTGCCTGACCACGAACCAGTTCCCTGAGCAGGCCTCGGACTCTACCGTCGTCAACAAAATCAACCAGGTCCTC
GGCCGCGAGAAGGAGCGGCTCTATGTCGGCCTCTACGTGCGCGGAAGCACTCCCAAGATGGCGGGAGGCGAAGAC
GAGTATCACTGGGCCTTCCTCGCCGGCCCCAAGCAGCACCCCAAGTCGGGCAGCCGCCACATCATGTACCACGCC
AAGGAGAAGCTGGTCAAGTCGGGCACCCCTCCGCAGATCCGACCCGAGTGGCAGTACGTCAACGACTCGAACCGG
GCGGCGATGCTCCTCGTCCGCGTCCTCGTCGGCAAGATCGTCGACCACGAGCGGCTCGAGAGGATCTTCAAGGCG
GTGCCGCTCCGCACCGAGGACGCCAACTGGAACTGCGTGCTCTGGATGGAGGATGCCTTCCGCATGATGGTGCAG
GACGGCGGCGCCATCACGACGAGCGTGCAGGACTGGGCCTCGGTCCGCGACAAGGCCATGAGCTACGTCGAGCAG
AAGAAGGCGGCCCACCGGTTCGACGGCAAGGACCCCAGCATCGTCTTCGACCCGGCCAAGCCGGCGACGTGGGAC
ATGCTCACCGACACGGAGATGACTCCGTAG
Gene >Hirsu2|2272
ATGTGCCTGACCACGAACCAGTTCCCTGAGCAGGCCTCGGACTCTACCGTCGTCAACAAAATCAACCAGGTCCTC
GGCCGCGAGAAGGAGCGGCTCTATGTCGGCCTCTACGTGCGCGGAAGCACTCCCAAGATGGCGGGAGGCGAAGAC
GAGTGAGTGAGCCCGCCCCCCGATGGCCTGCACGGCGCCGGCAGCGCAGTAACCGCGTCTCGAAAACCTAGGTAT
CACTGGGCCTTCCTCGCCGGCCCCAAGCAGCACCCCAAGTCGGGCAGCCGCCACATCATGTACCACGCCAAGGAG
AAGCTGGTCAAGTCGGGCACCCCTCCGCAGATCCGACCCGAGTGGCAGTACGTCAACGACTCGAACCGGGCGGCG
ATGCTCCTCGTCCGCGTCCTCGTCGGCAAGATCGTCGACCACGAGCGGCTCGAGAGGATCTTCAAGGCGGTGCCG
CTCCGCACCGAGGACGCCAACTGGAACTGCGTGCTCTGGATGGAGGATGCCTTCCGCATGATGGTGCAGGACGGC
GGCGCCATCACGACGAGCGTGCAGGACTGGGCCTCGGTCCGCGACAAGGCCATGAGCTACGTCGAGCAGAAGAAG
GCGGCCCACCGGTTCGACGGCAAGGACCCCAGCATCGTCTTCGACCCGGCCAAGCCGGCGACGTGGGACATGCTC
ACCGACACGGAGATGACTCCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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