© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|2262 |
| Gene name | |
| Location | Contig_153:5511..8131 |
| Strand | + |
| Gene length (bp) | 2620 |
| Transcript length (bp) | 2319 |
| Coding sequence length (bp) | 2319 |
| Protein length (aa) | 773 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.2515 | 0.1687 | 0.596 | 0.2388 | 0.4731 | 0.454 | 0.1261 | 0.1352 | 0.1994 | 0.0512 |
| Orthofinder run ID | 4 |
| Orthogroup | 4987 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2262 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|9560 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2262 MLFGSPGAIAGVSQPAVPRPEESLPLSFEEIHAAAGEIIQALGKVYPEGKVVVIGGLAVAKHLPGRRATRDVDIC LVSGFRPNSSEMKETLIKKDSRFYIRQTVSYDRNRLIHPNLFFKNADGKSFEIDLPGKYMLKFDPTSAQVLKDIP AGEVPYLSPAELVLTKIDASRTRVDVAKRAVDAGDAKALLEKYPDSKWETEAETQLVDGFIKEVCGGRKRDLCLQ RPSGLKPAGEPAPETPPKVGEEFTKDLEEVMLKETDILARQTFEFGIKRFGVGSLFKSPSSPDAVSALFAAQKAG FRGYESLSTSVNPTSTLKRLKSSTKGAILAVGIVFWAYDVHNALTTNMSSIDRAAVVTSILPIVGCSVQDWADRD KGEDNTETTALCIVSDVLLFTPAWPLGAMIKVGQFLGNLLSKNAELWDDLDRDQLRAHFLEGWNTICQDQKATIE SEEFKRELEAQLALRQSEIIYKASELRASLRVAAKHLPENDSTAAPIEPEALKKAEDDLMKMTCDQLEATRNQLG DEIIDRFSTSFVHNAAARYKIRFSEYHEHRIGNEALVSGGLERLAELVHDYDILRLSNSTDDVVESIDNVLRPMF WGLPKQECATANFWGPAEIEVSPAKTTTPEGPPAKTTTPEGSPAKTTTPEGPPAKTTTPEGPPAKTTMPEGPPAK TTMPEGPKKDERPALTPNPDCQEPCSAPRAGFKETITFEHIHYEDKGFFGCQTRTEHGMTIVESAPGCCAFKELK REQTKFGNRHCKGIEDPSECAM* |
| Coding | >Hirsu2|2262 ATGCTCTTTGGCTCTCCGGGTGCCATTGCCGGCGTATCACAGCCAGCGGTTCCCCGGCCCGAAGAGTCCCTGCCA CTTTCGTTCGAGGAGATTCACGCGGCCGCCGGTGAGATTATCCAAGCCCTCGGGAAGGTCTATCCCGAAGGCAAG GTTGTCGTCATCGGCGGGTTGGCGGTCGCGAAACACCTCCCAGGCCGCAGGGCTACCAGGGATGTCGATATATGT CTGGTGTCTGGTTTCCGCCCCAACAGTTCGGAGATGAAGGAAACGTTGATCAAGAAGGATAGCCGGTTCTACATC AGGCAGACCGTTTCATACGATCGCAACAGACTGATCCATCCAAATCTCTTTTTCAAGAATGCAGACGGCAAGAGT TTCGAGATCGACCTTCCTGGCAAATATATGCTCAAGTTTGATCCGACCTCGGCGCAGGTTCTTAAGGACATACCC GCCGGCGAGGTGCCTTACTTGTCGCCGGCCGAGCTTGTCCTCACCAAGATCGACGCGAGCAGAACTCGCGTCGAC GTCGCCAAGCGAGCCGTCGACGCCGGAGATGCAAAGGCGCTGCTCGAGAAGTATCCCGACTCCAAATGGGAGACC GAGGCCGAGACCCAGCTGGTCGACGGCTTCATTAAAGAGGTCTGTGGTGGACGCAAGAGGGACCTGTGCCTCCAG AGGCCGAGCGGGCTCAAGCCGGCGGGCGAGCCGGCACCGGAGACGCCCCCCAAGGTCGGGGAGGAGTTTACCAAG GACCTCGAAGAGGTCATGCTGAAGGAGACGGACATTCTCGCACGCCAGACGTTTGAATTCGGCATCAAGCGCTTC GGGGTCGGCAGCCTATTCAAGTCGCCGTCCTCGCCCGATGCGGTGAGCGCGCTCTTCGCCGCCCAGAAGGCTGGC TTCCGGGGCTACGAGTCGCTCTCCACCTCCGTCAACCCGACGTCGACATTGAAGCGGCTCAAGAGCAGCACCAAA GGAGCGATACTCGCCGTCGGCATTGTCTTCTGGGCCTACGATGTGCACAATGCCCTCACGACAAACATGAGCAGC ATCGACCGCGCCGCCGTCGTCACCTCGATCCTGCCGATCGTCGGCTGCTCCGTCCAGGACTGGGCAGATAGAGAC AAGGGCGAGGACAATACGGAGACCACGGCGCTCTGCATCGTCAGCGACGTGCTCCTCTTCACCCCGGCCTGGCCA CTTGGCGCCATGATCAAGGTCGGCCAGTTTCTCGGCAATCTGCTGTCGAAGAATGCCGAGCTCTGGGACGATCTT GACCGGGACCAGCTACGTGCCCACTTCCTCGAGGGCTGGAATACCATCTGCCAGGACCAGAAGGCGACCATCGAG TCGGAAGAGTTCAAGCGCGAGCTAGAAGCCCAACTCGCGCTCCGGCAGAGCGAGATCATCTACAAGGCCTCGGAG CTACGGGCCAGCCTGCGCGTGGCGGCCAAGCACCTACCAGAGAACGACTCCACGGCGGCCCCGATCGAGCCAGAG GCATTGAAAAAGGCCGAGGATGATCTCATGAAGATGACCTGCGACCAACTCGAGGCCACGCGCAACCAGCTCGGC GACGAAATCATCGATCGATTCTCTACCTCCTTCGTCCACAACGCTGCCGCGCGCTACAAGATCCGCTTTTCTGAG TATCATGAGCATCGGATCGGCAACGAGGCGTTGGTGTCGGGCGGCCTCGAGCGCCTGGCGGAACTGGTCCATGAC TACGATATCCTTCGCCTGTCTAACAGCACAGATGATGTCGTCGAAAGCATCGACAATGTCCTGCGGCCCATGTTC TGGGGTCTGCCGAAACAAGAGTGCGCGACAGCCAACTTTTGGGGGCCTGCCGAGATTGAGGTGTCGCCGGCGAAG ACAACGACGCCGGAGGGGCCGCCGGCGAAGACAACGACGCCGGAGGGGTCGCCGGCGAAGACAACGACGCCGGAG GGGCCACCGGCGAAGACAACGACGCCGGAGGGGCCACCGGCGAAGACAACGATGCCGGAGGGGCCACCGGCGAAG ACAACGATGCCGGAGGGGCCAAAGAAGGACGAAAGGCCCGCCTTGACGCCCAACCCCGACTGCCAGGAGCCGTGC AGCGCGCCGCGGGCCGGTTTCAAGGAGACGATCACGTTCGAGCACATCCACTACGAAGACAAGGGCTTCTTCGGA TGCCAGACCCGGACCGAGCACGGCATGACCATCGTCGAGTCTGCGCCCGGCTGCTGTGCCTTCAAGGAGCTCAAG CGTGAGCAGACCAAGTTCGGCAATCGTCACTGCAAGGGCATCGAGGATCCGTCGGAATGTGCTATGTAA |
| Transcript | >Hirsu2|2262 ATGCTCTTTGGCTCTCCGGGTGCCATTGCCGGCGTATCACAGCCAGCGGTTCCCCGGCCCGAAGAGTCCCTGCCA CTTTCGTTCGAGGAGATTCACGCGGCCGCCGGTGAGATTATCCAAGCCCTCGGGAAGGTCTATCCCGAAGGCAAG GTTGTCGTCATCGGCGGGTTGGCGGTCGCGAAACACCTCCCAGGCCGCAGGGCTACCAGGGATGTCGATATATGT CTGGTGTCTGGTTTCCGCCCCAACAGTTCGGAGATGAAGGAAACGTTGATCAAGAAGGATAGCCGGTTCTACATC AGGCAGACCGTTTCATACGATCGCAACAGACTGATCCATCCAAATCTCTTTTTCAAGAATGCAGACGGCAAGAGT TTCGAGATCGACCTTCCTGGCAAATATATGCTCAAGTTTGATCCGACCTCGGCGCAGGTTCTTAAGGACATACCC GCCGGCGAGGTGCCTTACTTGTCGCCGGCCGAGCTTGTCCTCACCAAGATCGACGCGAGCAGAACTCGCGTCGAC GTCGCCAAGCGAGCCGTCGACGCCGGAGATGCAAAGGCGCTGCTCGAGAAGTATCCCGACTCCAAATGGGAGACC GAGGCCGAGACCCAGCTGGTCGACGGCTTCATTAAAGAGGTCTGTGGTGGACGCAAGAGGGACCTGTGCCTCCAG AGGCCGAGCGGGCTCAAGCCGGCGGGCGAGCCGGCACCGGAGACGCCCCCCAAGGTCGGGGAGGAGTTTACCAAG GACCTCGAAGAGGTCATGCTGAAGGAGACGGACATTCTCGCACGCCAGACGTTTGAATTCGGCATCAAGCGCTTC GGGGTCGGCAGCCTATTCAAGTCGCCGTCCTCGCCCGATGCGGTGAGCGCGCTCTTCGCCGCCCAGAAGGCTGGC TTCCGGGGCTACGAGTCGCTCTCCACCTCCGTCAACCCGACGTCGACATTGAAGCGGCTCAAGAGCAGCACCAAA GGAGCGATACTCGCCGTCGGCATTGTCTTCTGGGCCTACGATGTGCACAATGCCCTCACGACAAACATGAGCAGC ATCGACCGCGCCGCCGTCGTCACCTCGATCCTGCCGATCGTCGGCTGCTCCGTCCAGGACTGGGCAGATAGAGAC AAGGGCGAGGACAATACGGAGACCACGGCGCTCTGCATCGTCAGCGACGTGCTCCTCTTCACCCCGGCCTGGCCA CTTGGCGCCATGATCAAGGTCGGCCAGTTTCTCGGCAATCTGCTGTCGAAGAATGCCGAGCTCTGGGACGATCTT GACCGGGACCAGCTACGTGCCCACTTCCTCGAGGGCTGGAATACCATCTGCCAGGACCAGAAGGCGACCATCGAG TCGGAAGAGTTCAAGCGCGAGCTAGAAGCCCAACTCGCGCTCCGGCAGAGCGAGATCATCTACAAGGCCTCGGAG CTACGGGCCAGCCTGCGCGTGGCGGCCAAGCACCTACCAGAGAACGACTCCACGGCGGCCCCGATCGAGCCAGAG GCATTGAAAAAGGCCGAGGATGATCTCATGAAGATGACCTGCGACCAACTCGAGGCCACGCGCAACCAGCTCGGC GACGAAATCATCGATCGATTCTCTACCTCCTTCGTCCACAACGCTGCCGCGCGCTACAAGATCCGCTTTTCTGAG TATCATGAGCATCGGATCGGCAACGAGGCGTTGGTGTCGGGCGGCCTCGAGCGCCTGGCGGAACTGGTCCATGAC TACGATATCCTTCGCCTGTCTAACAGCACAGATGATGTCGTCGAAAGCATCGACAATGTCCTGCGGCCCATGTTC TGGGGTCTGCCGAAACAAGAGTGCGCGACAGCCAACTTTTGGGGGCCTGCCGAGATTGAGGTGTCGCCGGCGAAG ACAACGACGCCGGAGGGGCCGCCGGCGAAGACAACGACGCCGGAGGGGTCGCCGGCGAAGACAACGACGCCGGAG GGGCCACCGGCGAAGACAACGACGCCGGAGGGGCCACCGGCGAAGACAACGATGCCGGAGGGGCCACCGGCGAAG ACAACGATGCCGGAGGGGCCAAAGAAGGACGAAAGGCCCGCCTTGACGCCCAACCCCGACTGCCAGGAGCCGTGC AGCGCGCCGCGGGCCGGTTTCAAGGAGACGATCACGTTCGAGCACATCCACTACGAAGACAAGGGCTTCTTCGGA TGCCAGACCCGGACCGAGCACGGCATGACCATCGTCGAGTCTGCGCCCGGCTGCTGTGCCTTCAAGGAGCTCAAG CGTGAGCAGACCAAGTTCGGCAATCGTCACTGCAAGGGCATCGAGGATCCGTCGGAATGTGCTATGTAA |
| Gene | >Hirsu2|2262 ATGCTCTTTGGCTCTCCGGGTGCCATTGCCGGCGTATCACAGCCAGCGGTTCCCCGGCCCGAAGAGTCCCTGCCA CTTTCGTTCGAGGAGATTCACGCGGCCGCCGGTGAGATTATCCAAGCCCTCGGGAAGGTCTATCCCGAAGGCAAG GTTGTCGTCATCGGCGGGTTGGCGGTCGCGAAACACCTCCCAGGCCGCAGGGCTACCAGGGTTGGTTCACCTCTC GGCTCGTCACGTCTGCCCTCATTGAGACTGACGTGACCCCCTCCCAAGGATGTCGATATATGTCTGGTGTCTGGT TTCCGCCCCAACAGTTCGGAGATGAAGGAAACGTTGATCAAGAAGGATAGCCGGTTCTACATCAGGCAGACCGTT TCATACGATCGCAACAGACTGATCCATCCAAATCTCTTTTTCAAGAATGCAGACGGCAAGAGTTTCGAGATCGAC CTTCCTGGCAAATATATGGTTCGTCGCCTCGTCCCCCGGATGTCTGCCAACAGAATACCCGGCAATGGTGTCTCG AATGGCAAGGCCGCGCGTGCGCTGATGTGAAATCTGCTTCTAGCTCAAGTTTGATCCGACCTCGGCGCAGGTTCT TAAGGACATACCCGCCGGCGAGGTGCCTTACTTGTCGCCGGCCGAGCTTGTCCTCACCAAGATCGACGCGAGCAG AACTCGCGTCGACGTCGCCAAGCGAGCCGTCGACGCCGGAGATGCAAAGGCGCTGCTCGAGAAGTATCCCGACTC CAAATGGGAGACCGAGGCCGAGACCCAGCTGGTCGACGGCTTCATTAAAGAGGTCTGTGGTGGACGCAAGAGGGA CCTGTGCCTCCAGAGGCCGAGCGGGCTCAAGCCGGCGGGCGAGCCGGCACCGGAGACGCCCCCCAAGGTCGGGGA GGAGTTTACCAAGGACCTCGAAGAGGTCATGCTGAAGGAGACGGACATTCTCGCACGCCAGACGTTTGAATTCGG CATCAAGCGCTTCGGGGTCGGCAGCCTATTCAAGTCGCCGTCCTCGCCCGATGCGGTGAGCGCGCTCTTCGCCGC CCAGAAGGCTGGCTTCCGGGGCTACGAGTCGCTCTCCACCTCCGTCAACCCGACGTCGACATTGAAGCGGCTCAA GAGCAGCACCAAAGGAGCGATACTCGCCGTCGGCATTGTCTTCTGGGCCTACGATGTGCACAATGCCCTCACGAC AAACATGAGCAGCATCGACCGCGCCGCCGTCGTCACCTCGATCCTGCCGATCGTCGGCTGCTCCGTCCAGGACTG GGCAGATAGAGACAAGGGCGAGGACAATACGGAGACCACGGCGCTCTGCATCGTCAGCGACGTGCTCCTCTTCAC CCCGGCCTGGCCACTTGGCGCCATGATCAAGGTCGGCCAGTTTCTCGGCAATCTGCTGTCGAAGAATGCCGAGCT CTGGGACGATCTTGACCGGGACCAGCTACGTGCCCACTTCCTCGAGGGCTGGAATACCATCTGCCAGGACCAGAA GGCGACCATCGAGTCGGAAGAGTTCAAGCGCGAGCTAGAAGCCCAACTCGCGCTCCGGCAGAGCGAGATCATCTA CAAGGCCTCGGAGCTACGGGCCAGCCTGCGCGTGGCGGCCAAGCACCTACCAGAGAACGACTCCACGGCGGCCCC GATCGAGCCAGAGGCATTGAAAAAGGCCGAGGATGATCTCATGAAGATGACCTGCGACCAACTCGAGGCCACGCG CAACCAGCTCGGCGACGAAATCATCGATCGATTCTCTACCTCCTTCGTCCACAACGCTGCCGCGCGCTACAAGAT CCGCTTTTCTGAGTATCATGAGCATCGGATCGGCAACGAGGCGTTGGTGTCGGGCGGCCTCGAGCGCCTGGCGGA ACTGGTCCATGACTACGATATCCTTCGCCTGTCTAACAGCACAGATGATGTCGTCGAAAGCATCGACAATGTCCT GCGGCCCATGTTCTGGGGTCTGCCGAAACAAGAGTGCGCGACAGCCAACTTTTGGGGGCCTGCCGAGATTGAGGT GTCGCCGGCGAAGACAACGACGCCGGAGGGGCCGCCGGCGAAGACAACGACGCCGGAGGGGTCGCCGGCGAAGAC AACGACGCCGGAGGGGCCACCGGCGAAGACAACGACGCCGGAGGGGCCACCGGCGAAGACAACGATGCCGGAGGG GCCACCGGCGAAGACAACGATGCCGGAGGGGCCAAAGAAGGACGAAAGGCCCGCCTTGACGCCCAACCCCGACTG CCAGGAGCCGTGCAGCGCGCCGCGGGCCGGTTTCAAGGAGACGATCACGTTCGAGCACATCCACTACGAAGACAA GGGCTTCTTCGGATGCCAGACCCGGACCGAGCACGGCATGACCATCGTCGAGTCTGCGCCCGGCTGCTGTGCCTT CAAGGAGCTCAAGCGTGAGCAGACCAAGTTCGGCAATCGGTGCGTTCCCCTCGACTTTCAACCACAACAATCACA GGGCGGGGACACCAACGTGCGGGAGGGCCCTGATTCAGGCGAGGGGGTTTCCAAGCCCGTCGAGGATGAAAAACC ATGGTGGGAGAGGTCTCCTATATATAGTCACTGCAAGGGCATCGAGGATCCGTCGGAATGTGCTATGTAA |