Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2261
Gene name
LocationContig_153:346..974
Strand-
Gene length (bp)628
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02492 cobW CobW/HypB/UreG, nucleotide-binding domain 3.9E-37 5 167

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P24203|YJIA_ECOLI Uncharacterized GTP-binding protein YjiA OS=Escherichia coli (strain K12) GN=yjiA PE=1 SV=3 1 166 7.0E-22
sp|O74310|YOG5_SCHPO COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.05 PE=3 SV=1 1 160 6.0E-17
sp|P29937|COBW_PSEDE Protein CobW OS=Pseudomonas denitrificans GN=cobW PE=3 SV=3 4 112 8.0E-16
sp|Q9HZQ2|COBW_PSEAE Protein CobW OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cobW PE=3 SV=1 1 132 1.0E-15
sp|Q869Q0|Y4527_DICDI COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1 4 168 2.0E-15
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Swissprot ID Swissprot Description Start End E-value
sp|P24203|YJIA_ECOLI Uncharacterized GTP-binding protein YjiA OS=Escherichia coli (strain K12) GN=yjiA PE=1 SV=3 1 166 7.0E-22
sp|O74310|YOG5_SCHPO COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.05 PE=3 SV=1 1 160 6.0E-17
sp|P29937|COBW_PSEDE Protein CobW OS=Pseudomonas denitrificans GN=cobW PE=3 SV=3 4 112 8.0E-16
sp|Q9HZQ2|COBW_PSEAE Protein CobW OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cobW PE=3 SV=1 1 132 1.0E-15
sp|Q869Q0|Y4527_DICDI COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1 4 168 2.0E-15
sp|P33030|YEIR_ECOLI Zinc-binding GTPase YeiR OS=Escherichia coli (strain K12) GN=yeiR PE=1 SV=2 7 107 2.0E-14
sp|P94400|YCIC_BACSU Putative metal chaperone YciC OS=Bacillus subtilis (strain 168) GN=yciC PE=2 SV=1 1 170 2.0E-14
sp|Q99MB4|CBWD1_RAT COBW domain-containing protein 1 OS=Rattus norvegicus GN=Cbwd1 PE=2 SV=2 4 168 4.0E-13
sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=1 SV=1 1 168 5.0E-13
sp|Q8IUF1|CBWD2_HUMAN COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1 2 132 2.0E-12
sp|Q9BRT8|CBWD1_HUMAN COBW domain-containing protein 1 OS=Homo sapiens GN=CBWD1 PE=1 SV=1 2 132 3.0E-12
sp|P53729|YN8H_YEAST Uncharacterized protein YNR029C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR029C PE=1 SV=1 4 163 7.0E-12
sp|Q4V339|CBWD6_HUMAN COBW domain-containing protein 6 OS=Homo sapiens GN=CBWD6 PE=3 SV=1 2 167 4.0E-11
sp|Q5JTY5|CBWD3_HUMAN COBW domain-containing protein 3 OS=Homo sapiens GN=CBWD3 PE=2 SV=1 2 167 4.0E-11
sp|P31521|P47K_PSECL 47 kDa protein OS=Pseudomonas chlororaphis PE=3 SV=1 4 132 5.0E-11
sp|Q5RIA9|CBWD5_HUMAN COBW domain-containing protein 5 OS=Homo sapiens GN=CBWD5 PE=2 SV=1 2 167 1.0E-10
sp|P22042|YTR2_SPIAU Uncharacterized protein in trpE 3'region (Fragment) OS=Spirochaeta aurantia PE=4 SV=1 5 56 4.0E-09
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6669 0.2393 0.373 0.0093 0.2057 0.15 0.3169 0.1982 0.2276 0.0252

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2012
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1345
Ophiocordyceps australis map64 (Brazil) OphauB2|6020
Ophiocordyceps camponoti-floridani Ophcf2|05377
Ophiocordyceps camponoti-rufipedis Ophun1|4327
Ophiocordyceps kimflemingae Ophio5|2351
Ophiocordyceps subramaniannii Hirsu2|2261 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2261
MAPIPITIVTGFLGSGKTTLILGLARQLRARNPGYRLALLKNEFGDVAVDSELAGSSAVAGVRELLGGCICCNLV
GGLGAALEELAAGAAPDRVVVETSGSAFPATLALEVNRLARETGGRYALDGVVSVVDVENWAGYDDTSYTARIQA
RYTDLVVLNKWEAAGEDRYED*
Coding >Hirsu2|2261
ATGGCGCCGATCCCCATCACCATCGTCACCGGCTTCCTCGGCTCGGGCAAGACGACGCTGATCCTGGGGCTGGCG
CGGCAGCTGCGGGCGCGCAACCCGGGGTACCGGCTGGCACTGCTGAAAAACGAGTTCGGCGACGTGGCCGTCGAC
TCGGAGCTGGCGGGCAGCTCGGCGGTGGCGGGCGTGCGCGAGCTACTGGGCGGCTGCATCTGCTGCAACCTGGTG
GGCGGGCTGGGCGCGGCGCTCGAGGAGCTGGCGGCGGGCGCGGCGCCGGACCGGGTCGTGGTCGAGACGAGCGGC
TCGGCCTTCCCGGCGACGCTGGCGCTCGAGGTCAACCGGCTGGCGCGCGAGACGGGCGGGCGGTACGCGCTGGAC
GGCGTCGTCAGCGTCGTCGACGTCGAGAACTGGGCCGGCTACGACGACACCAGCTACACGGCCCGGATCCAGGCC
CGCTACACCGACCTCGTCGTCCTCAACAAGTGGGAGGCCGCCGGCGAGGACCGCTACGAGGACTGA
Transcript >Hirsu2|2261
ATGGCGCCGATCCCCATCACCATCGTCACCGGCTTCCTCGGCTCGGGCAAGACGACGCTGATCCTGGGGCTGGCG
CGGCAGCTGCGGGCGCGCAACCCGGGGTACCGGCTGGCACTGCTGAAAAACGAGTTCGGCGACGTGGCCGTCGAC
TCGGAGCTGGCGGGCAGCTCGGCGGTGGCGGGCGTGCGCGAGCTACTGGGCGGCTGCATCTGCTGCAACCTGGTG
GGCGGGCTGGGCGCGGCGCTCGAGGAGCTGGCGGCGGGCGCGGCGCCGGACCGGGTCGTGGTCGAGACGAGCGGC
TCGGCCTTCCCGGCGACGCTGGCGCTCGAGGTCAACCGGCTGGCGCGCGAGACGGGCGGGCGGTACGCGCTGGAC
GGCGTCGTCAGCGTCGTCGACGTCGAGAACTGGGCCGGCTACGACGACACCAGCTACACGGCCCGGATCCAGGCC
CGCTACACCGACCTCGTCGTCCTCAACAAGTGGGAGGCCGCCGGCGAGGACCGCTACGAGGACTGA
Gene >Hirsu2|2261
ATGGCGCCGATCCCCATCACCATCGTCACCGGCTTCCTCGGCTCGGGCAAGACGACGCTGATCCTGGGGCTGGCG
CGGCAGCTGCGGGCGCGCAACCCGGGGTACCGGCTGGCACTGCTGAAAAACGAGTTCGGCGACGTGGCCGTCGAC
TCGGAGCTGGCGGGCAGCTCGGCGGTGGCGGGCGTGCGCGAGCTACTGGGCGGCTGCATCTGCTGCAACCTGGTG
GGCGGGCTGGGCGCGGCGCTCGAGGAGCTGGCGGCGGGCGCGGCGCCGGACCGGGTCGTGGTCGAGACGAGCGGC
TCGGCCTTCCCGGCGACGCTGGCGCTCGAGGTCAACCGGCTGGCGCGCGAGACGGGCGGGCGGTACGCGCTGGAC
GGCGTCGTCAGCGTCGTCGACGTCGAGAACTGGGCCGGCTACGACGACACCAGCTACACGGCCCGGATCCAGGCC
CGCTACACCGACCTCGTCGTCCTCAACAAGTGGGAGGCCGCCGGCGAGGACCGCTACGAGGAGTGCCTCGACCGC
CTCGGCGACCTCGAAGTCGACGTCGCCCGCGTCCGGAGCGACCGCGGCCGCGTCGACGCCGACCTCGTCTTCGGC
ATCGACGGCGCCCTGGCCCGCCAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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