Protein ID | Hirsu2|226 |
Gene name | |
Location | Contig_104:17862..20271 |
Strand | + |
Gene length (bp) | 2409 |
Transcript length (bp) | 1965 |
Coding sequence length (bp) | 1965 |
Protein length (aa) | 655 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Extracellular | Signal peptide | 0.508 | 0.219 | 0.8015 | 0.1745 | 0.1832 | 0.2079 | 0.0656 | 0.1319 | 0.193 | 0.006 |
Orthofinder run ID | 4 |
Orthogroup | 515 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|226 MLGPRDRDQQYGFLTADSDGTAFITLAGDAESIDETLRQLRTGGVEHVYLYEISTAPNMIADAHDREDNYYYFAV GGILWSQVRRFADVDLRREGPEPAAYYWEANEAYDPAWEYYRTSGFHPELSGLDSRNEAWSYWQEEASWTNPRPD FVTRRQELLVFMNGITSDERLRRLLGWQGDFPLIHTDWPGVGIRYNYLDDDADEEGMEMARFPWDAVKIPRHLQR KLKLGRPTGEECRIAIASIALSYWSARAAQGGNRNSKRSLSSRPVNKLDEGQAGSGYCETRPREAICDRNARATA KPGACVELNTLIRKLKGKGAAKPKETPDTAAERPPVSKEAGDCSDFNRLEVRLQLGRGFSGFDGAGTFDKIQIQI GRASFPLADHPASGFDARREIELVKAFGSPIVPVKDVNSFRLYSKKDERTNPDSWELAGLEFFGRCSGTGGRVAK VGKFDDLYAWFNRHGKFSKHPSPAELEGGIGLDDWHWETEDAETKTLAVQPPGQPDACTKFKRLDVRLQLGHGIW GLDGAGTDDDIIIQFAEKNVTLAKAPSRNYDETVRIDLADVFGSDAVAVRDIAAFQVRAVPADGKNAWELKSLTL QGRCSGSAAAAEVVKYQDLNIWIDSLDDEVPRSLDGNLTVSDWHWVRDAYRLAG* |
Coding | >Hirsu2|226 ATGCTCGGGCCGCGAGATCGTGATCAGCAATACGGGTTTTTGACGGCCGACTCCGACGGCACTGCATTCATCACC CTAGCGGGCGACGCCGAAAGCATAGACGAGACGTTGAGGCAACTCAGGACAGGTGGAGTCGAACATGTCTACCTC TATGAGATTTCCACGGCGCCTAATATGATAGCGGACGCCCACGACCGTGAGGATAACTATTACTATTTTGCCGTC GGCGGCATCCTATGGTCGCAAGTACGTAGGTTCGCCGACGTCGACCTGCGACGGGAGGGGCCGGAACCGGCGGCC TACTACTGGGAAGCAAACGAAGCATACGACCCGGCGTGGGAGTACTATCGCACCAGCGGCTTCCACCCCGAGCTT TCCGGGCTCGACTCACGCAACGAGGCCTGGTCCTACTGGCAGGAGGAGGCCAGCTGGACAAACCCACGGCCCGAT TTCGTGACGCGGCGCCAAGAGCTCCTGGTTTTCATGAACGGCATCACGTCCGACGAGCGACTCAGACGACTGCTT GGCTGGCAAGGCGACTTCCCCTTGATCCACACCGATTGGCCGGGCGTCGGCATCCGGTATAACTATCTCGACGAT GACGCAGACGAGGAGGGCATGGAGATGGCGCGCTTCCCATGGGACGCCGTGAAAATCCCCCGCCATCTGCAAAGG AAGCTCAAGCTCGGCCGTCCTACCGGCGAGGAATGCAGAATCGCCATCGCTTCCATAGCGCTCTCCTACTGGTCA GCCCGTGCGGCACAGGGCGGCAACAGAAACAGCAAGAGGTCGCTTTCAAGCCGTCCTGTCAATAAGCTCGATGAA GGACAAGCCGGTTCAGGATACTGCGAAACACGCCCGAGGGAAGCCATCTGCGACCGCAATGCGCGAGCAACGGCA AAGCCAGGAGCCTGCGTCGAACTGAATACCTTGATACGCAAGCTGAAGGGGAAGGGCGCTGCCAAGCCCAAGGAA ACGCCCGACACTGCCGCAGAGCGGCCTCCGGTCTCGAAAGAAGCAGGCGACTGCTCTGATTTCAACCGCCTCGAG GTTCGCTTGCAGCTCGGCAGGGGCTTCTCGGGCTTCGACGGGGCCGGGACGTTCGACAAGATCCAGATCCAGATC GGGAGGGCGTCCTTCCCGCTTGCCGATCACCCCGCCAGCGGCTTCGACGCGAGGCGGGAAATCGAGCTTGTCAAG GCGTTCGGGTCCCCGATAGTCCCCGTGAAAGACGTCAACTCCTTCCGGCTCTATTCCAAGAAGGACGAGCGGACG AACCCCGACTCGTGGGAGCTCGCAGGCCTCGAATTCTTCGGACGCTGCTCCGGTACCGGCGGCCGGGTCGCCAAG GTCGGCAAGTTTGACGACCTCTACGCGTGGTTCAACCGCCACGGCAAGTTCTCCAAACACCCGTCCCCGGCCGAG CTCGAGGGCGGGATCGGCCTCGACGACTGGCACTGGGAGACGGAGGACGCCGAGACGAAGACGCTGGCCGTGCAG CCTCCCGGCCAGCCCGACGCCTGCACCAAGTTCAAGAGGCTCGACGTTCGTCTGCAGCTGGGCCACGGCATATGG GGTCTCGACGGCGCCGGGACGGACGACGACATCATCATCCAGTTTGCGGAGAAGAACGTGACGCTTGCCAAGGCC CCTTCGAGGAACTACGACGAGACGGTGCGCATCGACCTGGCCGACGTCTTCGGCTCCGACGCCGTCGCCGTCCGG GACATCGCGGCCTTCCAGGTCCGCGCGGTCCCGGCCGACGGCAAGAACGCGTGGGAACTGAAAAGTCTCACCCTC CAAGGCCGGTGCAGCGGCTCGGCGGCCGCGGCCGAGGTCGTCAAGTACCAAGACCTCAACATCTGGATCGACAGC CTGGACGACGAGGTGCCGCGCAGCCTGGACGGCAACCTGACCGTCAGCGACTGGCACTGGGTCAGGGACGCGTAT CGTTTGGCAGGATAG |
Transcript | >Hirsu2|226 ATGCTCGGGCCGCGAGATCGTGATCAGCAATACGGGTTTTTGACGGCCGACTCCGACGGCACTGCATTCATCACC CTAGCGGGCGACGCCGAAAGCATAGACGAGACGTTGAGGCAACTCAGGACAGGTGGAGTCGAACATGTCTACCTC TATGAGATTTCCACGGCGCCTAATATGATAGCGGACGCCCACGACCGTGAGGATAACTATTACTATTTTGCCGTC GGCGGCATCCTATGGTCGCAAGTACGTAGGTTCGCCGACGTCGACCTGCGACGGGAGGGGCCGGAACCGGCGGCC TACTACTGGGAAGCAAACGAAGCATACGACCCGGCGTGGGAGTACTATCGCACCAGCGGCTTCCACCCCGAGCTT TCCGGGCTCGACTCACGCAACGAGGCCTGGTCCTACTGGCAGGAGGAGGCCAGCTGGACAAACCCACGGCCCGAT TTCGTGACGCGGCGCCAAGAGCTCCTGGTTTTCATGAACGGCATCACGTCCGACGAGCGACTCAGACGACTGCTT GGCTGGCAAGGCGACTTCCCCTTGATCCACACCGATTGGCCGGGCGTCGGCATCCGGTATAACTATCTCGACGAT GACGCAGACGAGGAGGGCATGGAGATGGCGCGCTTCCCATGGGACGCCGTGAAAATCCCCCGCCATCTGCAAAGG AAGCTCAAGCTCGGCCGTCCTACCGGCGAGGAATGCAGAATCGCCATCGCTTCCATAGCGCTCTCCTACTGGTCA GCCCGTGCGGCACAGGGCGGCAACAGAAACAGCAAGAGGTCGCTTTCAAGCCGTCCTGTCAATAAGCTCGATGAA GGACAAGCCGGTTCAGGATACTGCGAAACACGCCCGAGGGAAGCCATCTGCGACCGCAATGCGCGAGCAACGGCA AAGCCAGGAGCCTGCGTCGAACTGAATACCTTGATACGCAAGCTGAAGGGGAAGGGCGCTGCCAAGCCCAAGGAA ACGCCCGACACTGCCGCAGAGCGGCCTCCGGTCTCGAAAGAAGCAGGCGACTGCTCTGATTTCAACCGCCTCGAG GTTCGCTTGCAGCTCGGCAGGGGCTTCTCGGGCTTCGACGGGGCCGGGACGTTCGACAAGATCCAGATCCAGATC GGGAGGGCGTCCTTCCCGCTTGCCGATCACCCCGCCAGCGGCTTCGACGCGAGGCGGGAAATCGAGCTTGTCAAG GCGTTCGGGTCCCCGATAGTCCCCGTGAAAGACGTCAACTCCTTCCGGCTCTATTCCAAGAAGGACGAGCGGACG AACCCCGACTCGTGGGAGCTCGCAGGCCTCGAATTCTTCGGACGCTGCTCCGGTACCGGCGGCCGGGTCGCCAAG GTCGGCAAGTTTGACGACCTCTACGCGTGGTTCAACCGCCACGGCAAGTTCTCCAAACACCCGTCCCCGGCCGAG CTCGAGGGCGGGATCGGCCTCGACGACTGGCACTGGGAGACGGAGGACGCCGAGACGAAGACGCTGGCCGTGCAG CCTCCCGGCCAGCCCGACGCCTGCACCAAGTTCAAGAGGCTCGACGTTCGTCTGCAGCTGGGCCACGGCATATGG GGTCTCGACGGCGCCGGGACGGACGACGACATCATCATCCAGTTTGCGGAGAAGAACGTGACGCTTGCCAAGGCC CCTTCGAGGAACTACGACGAGACGGTGCGCATCGACCTGGCCGACGTCTTCGGCTCCGACGCCGTCGCCGTCCGG GACATCGCGGCCTTCCAGGTCCGCGCGGTCCCGGCCGACGGCAAGAACGCGTGGGAACTGAAAAGTCTCACCCTC CAAGGCCGGTGCAGCGGCTCGGCGGCCGCGGCCGAGGTCGTCAAGTACCAAGACCTCAACATCTGGATCGACAGC CTGGACGACGAGGTGCCGCGCAGCCTGGACGGCAACCTGACCGTCAGCGACTGGCACTGGGTCAGGGACGCGTAT CGTTTGGCAGGATAG |
Gene | >Hirsu2|226 ATGCTCGGGCCGCGAGATCGTGATCAGCAATACGGGTTTTTGACGGCCGACTCCGACGGCACTGCATTCATCACC CTAGCGGGCGACGCCGAAAGCATAGACGAGACGTTGAGGCAACTCAGGACAGGTGGAGTCGAACATGTCTACCTC TATGAGATTTCCACGGCGCCTAATATGATAGCGGACGCCCACGACCGTGAGGATAACTATTACTATTTTGCCGTC GGCGGCATCCTATGGTCGCAAGTACGTAGGTTCGCCGACGTCGACCTGCGACGGGAGGGGCCGGAACCGGCGGCC TACTACTGGGAAGCAAACGAAGCATACGACCCGGCGTGGGAGTACTATCGCACCAGCGGCTTCCACCCCGAGCTT TCCGGGCTCGACTCACGCAACGAGGCCTGGTCCTACTGGCAGGAGGAGGCCAGCTGGACAAACCCACGGCCCGAT TTCGTGACGCGGCGCCAAGAGCTCCTGGTTTTCATGAACGGCATCACGTCCGACGAGCGACTCAGACGACTGCTT GGCTGGCAAGGCGACTTCCCCTTGATCCACACCGATTGGCCGGGCGTCGGCATCCGGTATAACTATCTCGACGAT GACGCAGACGAGGAGGGCATGGAGATGGCGCGCTTCCCATGGGACGCCGTGAAAATCCCCCGCCATCTGCAAAGG AAGCTCAAGCTCGGCCGTCCTACCGGCGAGGAATGCAGAATCGCCATCGCTTCCATAGCGCTCTCCTACTGGTCA GCCCGTGCGGCACAGGGCGGCAACAGAAACAGCAAGAGGTCGCTTTCAAGCCGTCCTGTCAATAAGCTCGATGAA GGTGTGTTACTTTCTGCCTGTCGCAAACCCGATCCTCACTGGTCTCGGCACGAGAGGCCAAGCTTTGGATTCATA GGTCAAGGCGCGGGTGATGAGGCAAAGCGGAGCTGAGAAGGCGTGGTGGCCTTGAGAGGTGAAGCCTCTCTGTAT GCTGTCCTGATAACGTGGCGGGCACATGTGACCGGTGGCCGGTCCAACACTACCTAATGCCGACCGTTGATCCTG CCCGCACTCCCTACAGACGTCTAAAGCTCCGAGCGAAGAAAGGAGTGCTTTCGAGGTCGAGGCTGACAGGACGCA TCAGGACAAGCCGGTTCAGGATACTGCGAAACACGCCCGAGGGAAGCCATCTGCGACCGCAATGCGCGAGCAACG GCAAAGCCAGGAGCCTGCGTCGAACTGAATACCTTGATACGCAAGCTGAAGGGGAAGGGCGCTGCCAAGCCCAAG GAAACGCCCGACACTGCCGCAGAGCGGCCTCCGGTCTCGAAAGAAGCAGGCGACTGCTCTGATTTCAACCGCCTC GAGGTTCGCTTGCAGCTCGGCAGGGGCTTCTCGGGCTTCGACGGGGCCGGGACGTTCGACAAGATCCAGATCCAG ATCGGGAGGGCGTCCTTCCCGCTTGCCGATCACCCCGCCAGCGGCTTCGACGCGAGGCGGGAAATCGAGCTTGTC AAGGCGTTCGGGTCCCCGATAGTCCCCGTGAAAGACGTCAACTCCTTCCGGCTCTATTCCAAGAAGGACGAGCGG ACGAACCCCGACTCGTGGGAGCTCGCAGGTAAGCCACCGCCGTACTTTCTCTCTTTCCCAGTCGACGATGTTGAT TATCCGCCTCAGGCCTCGAATTCTTCGGACGCTGCTCCGGTACCGGCGGCCGGGTCGCCAAGGTCGGCAAGTTTG ACGACCTCTACGCGTGGTTCAACCGCCACGGCAAGTTCTCCAAACACCCGTCCCCGGCCGAGCTCGAGGGCGGGA TCGGCCTCGACGACTGGCACTGGGAGACGGAGGACGCCGAGACGAAGACGCTGGCCGTGCAGCCTCCCGGCCAGC CCGACGCCTGCACCAAGTTCAAGAGGCTCGACGTTCGTCTGCAGCTGGGCCACGGCATATGGGGTCTCGACGGCG CCGGGACGGACGACGACATCATCATCCAGTTTGCGGAGAAGAACGTGACGCTTGCCAAGGCCCCTTCGAGGAACT ACGACGAGACGGTGCGCATCGACCTGGCCGACGTCTTCGGCTCCGACGCCGTCGCCGTCCGGGACATCGCGGCCT TCCAGGTCCGCGCGGTCCCGGCCGACGGCAAGAACGCGTGGGAACTGAAAAGTACGTCATCTTCCTCCCCCGGAG CTCGAAAAGAGCGCGGCTCGGATCTAACTCGGGCGTGGCGAACCCGGGCGTGGGGCAGGTCTCACCCTCCAAGGC CGGTGCAGCGGCTCGGCGGCCGCGGCCGAGGTCGTCAAGTACCAAGACCTCAACATCTGGATCGACAGCCTGGAC GACGAGGTGCCGCGCAGCCTGGACGGCAACCTGACCGTCAGCGACTGGCACTGGGTCAGGGACGCGTATCGTTTG GCAGGATAG |