© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2259 |
| Gene name | |
| Location | Contig_1529:822..2509 |
| Strand | - |
| Gene length (bp) | 1687 |
| Transcript length (bp) | 1254 |
| Coding sequence length (bp) | 1254 |
| Protein length (aa) | 418 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00557 | Peptidase_M24 | Metallopeptidase family M24 | 2.0E-07 | 20 | 135 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09184|CDB4_SCHPO | Curved DNA-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cdb4 PE=1 SV=1 | 7 | 382 | 3.0E-74 |
| sp|M1CZC0|EBP1_SOLTU | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum GN=EBP1 PE=2 SV=1 | 1 | 348 | 1.0E-54 |
| sp|Q9UQ80|PA2G4_HUMAN | Proliferation-associated protein 2G4 OS=Homo sapiens GN=PA2G4 PE=1 SV=3 | 1 | 384 | 8.0E-54 |
| sp|Q6AYD3|PA2G4_RAT | Proliferation-associated protein 2G4 OS=Rattus norvegicus GN=Pa2g4 PE=1 SV=1 | 1 | 384 | 2.0E-53 |
| sp|P50580|PA2G4_MOUSE | Proliferation-associated protein 2G4 OS=Mus musculus GN=Pa2g4 PE=1 SV=3 | 1 | 384 | 3.0E-53 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09184|CDB4_SCHPO | Curved DNA-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cdb4 PE=1 SV=1 | 7 | 382 | 3.0E-74 |
| sp|M1CZC0|EBP1_SOLTU | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum GN=EBP1 PE=2 SV=1 | 1 | 348 | 1.0E-54 |
| sp|Q9UQ80|PA2G4_HUMAN | Proliferation-associated protein 2G4 OS=Homo sapiens GN=PA2G4 PE=1 SV=3 | 1 | 384 | 8.0E-54 |
| sp|Q6AYD3|PA2G4_RAT | Proliferation-associated protein 2G4 OS=Rattus norvegicus GN=Pa2g4 PE=1 SV=1 | 1 | 384 | 2.0E-53 |
| sp|P50580|PA2G4_MOUSE | Proliferation-associated protein 2G4 OS=Mus musculus GN=Pa2g4 PE=1 SV=3 | 1 | 384 | 3.0E-53 |
| sp|Q96327|EBP1_ARATH | ERBB-3 BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=EBP1 PE=2 SV=1 | 1 | 348 | 2.0E-50 |
| sp|Q1ZXG4|PRLA_DICDI | Proliferation-associated protein A OS=Dictyostelium discoideum GN=prlA PE=2 SV=1 | 12 | 382 | 9.0E-45 |
| sp|O60180|ARX1_SCHPO | Probable metalloprotease arx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arx1 PE=3 SV=1 | 18 | 363 | 2.0E-20 |
| sp|Q6CCY2|ARX1_YARLI | Probable metalloprotease ARX1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ARX1 PE=3 SV=1 | 12 | 378 | 2.0E-18 |
| sp|Q6BI90|ARX1_DEBHA | Probable metalloprotease ARX1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ARX1 PE=3 SV=2 | 14 | 301 | 4.0E-16 |
| sp|Q5AI37|ARX1_CANAL | Probable metalloprotease ARX1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ARX1 PE=3 SV=1 | 20 | 235 | 4.0E-14 |
| sp|Q6FL44|ARX1_CANGA | Probable metalloprotease ARX1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ARX1 PE=3 SV=1 | 18 | 205 | 2.0E-11 |
| sp|Q58725|MAP2_METJA | Methionine aminopeptidase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=map PE=3 SV=1 | 24 | 349 | 1.0E-09 |
| sp|Q74ZU6|ARX1_ASHGO | Probable metalloprotease ARX1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ARX1 PE=3 SV=1 | 2 | 205 | 9.0E-08 |
| sp|A4RDI6|MAP2_MAGO7 | Methionine aminopeptidase 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_00966 PE=3 SV=1 | 2 | 344 | 2.0E-07 |
| sp|O27355|MAP2_METTH | Methionine aminopeptidase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=map PE=3 SV=1 | 18 | 352 | 4.0E-07 |
| sp|Q03862|ARX1_YEAST | Probable metalloprotease ARX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARX1 PE=1 SV=1 | 18 | 205 | 3.0E-06 |
| sp|Q6CKB6|ARX1_KLULA | Probable metalloprotease ARX1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ARX1 PE=3 SV=1 | 17 | 205 | 7.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.6342 | 0.6484 | 0.172 | 0.0349 | 0.0492 | 0.0243 | 0.2142 | 0.0165 | 0.1743 | 0.0034 |
| Orthofinder run ID | 4 |
| Orthogroup | 2010 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2259 MSEDKEAVDYSLNNPDTLTKYKTAGQISQKVLAAVAELCVPGAKIVDICQKGDKLIEEEIAKVYRGKKVNKGFSH PTTVSPASYVTPYTPLTSDESEASLEIQPGEPIKIQLGAQIDGFGAIVCDTILANPKDKAQEPVSGRPADLILAT HHANELLLRLMLPPGLLAQGTDEEKAKAAAQKAPTQAKITSLLDKVCESYGCHLVESTTSWLFDRNEIEGSKKIV LAPAEGTKGEGVPETSEVWGVEMGVSLGSGKVKTLDQRATLHRRTTQTYGLKRPTSRKILSEVQKKFGTFPFSLR QLEDERDAKSGVVECVRGNVFRQYELVGDKDSAPVARLLTTIVITKNGITKLGGPPALDESKFKTDKKITDEEVL KILEQPLCRNTGKKKSKAKKKKKPAKKAAGGESDDDSDDSDE* |
| Coding | >Hirsu2|2259 ATGTCGGAAGACAAGGAAGCCGTTGACTACTCCCTCAACAACCCCGACACGCTCACCAAGTACAAGACGGCCGGC CAGATCTCCCAAAAGGTCCTGGCTGCCGTCGCTGAGCTCTGTGTGCCCGGGGCCAAGATTGTCGACATCTGCCAA AAGGGCGACAAGCTGATCGAGGAGGAGATTGCCAAGGTCTACCGAGGCAAAAAGGTCAACAAAGGCTTCTCCCAC CCCACCACTGTCTCGCCCGCCTCTTATGTCACCCCCTACACCCCCTTGACGTCGGATGAGAGCGAGGCCTCGCTT GAGATCCAGCCGGGCGAACCCATCAAGATCCAGCTGGGGGCCCAGATTGACGGCTTCGGCGCCATTGTCTGTGAC ACCATCCTGGCCAACCCCAAGGACAAGGCCCAGGAGCCCGTCTCGGGCCGCCCTGCCGACCTGATTCTCGCCACT CACCACGCCAACGAGCTGCTCCTGCGGCTCATGCTCCCTCCCGGTCTGCTGGCCCAAGGCACCGACGAGGAAAAG GCCAAGGCGGCGGCGCAGAAGGCTCCCACCCAGGCCAAGATCACGAGCCTGCTGGACAAGGTCTGCGAGAGCTAC GGCTGCCACCTCGTCGAGAGCACCACCTCCTGGCTCTTTGACCGCAACGAGATTGAGGGCTCCAAGAAGATTGTG CTTGCGCCCGCCGAAGGCACCAAGGGCGAGGGCGTGCCCGAGACGTCCGAGGTGTGGGGGGTTGAAATGGGCGTC AGCTTGGGCTCCGGCAAGGTCAAGACGCTCGATCAGCGTGCAACGCTTCATCGCCGCACCACGCAGACGTACGGC TTGAAGCGGCCCACGTCGCGCAAGATCCTGTCCGAAGTGCAGAAGAAGTTTGGCACCTTCCCCTTCAGCCTGAGG CAGCTCGAGGACGAACGGGATGCCAAGTCGGGCGTCGTCGAATGCGTGCGCGGTAACGTTTTCCGCCAGTATGAG CTGGTCGGCGACAAGGACAGTGCTCCTGTCGCCCGGCTCCTGACAACCATTGTCATCACCAAGAACGGCATTACC AAGCTCGGCGGGCCTCCCGCGCTGGATGAGAGCAAGTTCAAGACGGACAAGAAGATCACGGATGAGGAAGTGCTC AAGATTCTCGAGCAGCCCCTGTGCAGAAACACGGGCAAGAAGAAGAGCAAGGCCAAGAAGAAGAAGAAGCCGGCG AAGAAGGCGGCAGGCGGAGAATCGGATGACGATTCGGATGACAGCGACGAGTAG |
| Transcript | >Hirsu2|2259 ATGTCGGAAGACAAGGAAGCCGTTGACTACTCCCTCAACAACCCCGACACGCTCACCAAGTACAAGACGGCCGGC CAGATCTCCCAAAAGGTCCTGGCTGCCGTCGCTGAGCTCTGTGTGCCCGGGGCCAAGATTGTCGACATCTGCCAA AAGGGCGACAAGCTGATCGAGGAGGAGATTGCCAAGGTCTACCGAGGCAAAAAGGTCAACAAAGGCTTCTCCCAC CCCACCACTGTCTCGCCCGCCTCTTATGTCACCCCCTACACCCCCTTGACGTCGGATGAGAGCGAGGCCTCGCTT GAGATCCAGCCGGGCGAACCCATCAAGATCCAGCTGGGGGCCCAGATTGACGGCTTCGGCGCCATTGTCTGTGAC ACCATCCTGGCCAACCCCAAGGACAAGGCCCAGGAGCCCGTCTCGGGCCGCCCTGCCGACCTGATTCTCGCCACT CACCACGCCAACGAGCTGCTCCTGCGGCTCATGCTCCCTCCCGGTCTGCTGGCCCAAGGCACCGACGAGGAAAAG GCCAAGGCGGCGGCGCAGAAGGCTCCCACCCAGGCCAAGATCACGAGCCTGCTGGACAAGGTCTGCGAGAGCTAC GGCTGCCACCTCGTCGAGAGCACCACCTCCTGGCTCTTTGACCGCAACGAGATTGAGGGCTCCAAGAAGATTGTG CTTGCGCCCGCCGAAGGCACCAAGGGCGAGGGCGTGCCCGAGACGTCCGAGGTGTGGGGGGTTGAAATGGGCGTC AGCTTGGGCTCCGGCAAGGTCAAGACGCTCGATCAGCGTGCAACGCTTCATCGCCGCACCACGCAGACGTACGGC TTGAAGCGGCCCACGTCGCGCAAGATCCTGTCCGAAGTGCAGAAGAAGTTTGGCACCTTCCCCTTCAGCCTGAGG CAGCTCGAGGACGAACGGGATGCCAAGTCGGGCGTCGTCGAATGCGTGCGCGGTAACGTTTTCCGCCAGTATGAG CTGGTCGGCGACAAGGACAGTGCTCCTGTCGCCCGGCTCCTGACAACCATTGTCATCACCAAGAACGGCATTACC AAGCTCGGCGGGCCTCCCGCGCTGGATGAGAGCAAGTTCAAGACGGACAAGAAGATCACGGATGAGGAAGTGCTC AAGATTCTCGAGCAGCCCCTGTGCAGAAACACGGGCAAGAAGAAGAGCAAGGCCAAGAAGAAGAAGAAGCCGGCG AAGAAGGCGGCAGGCGGAGAATCGGATGACGATTCGGATGACAGCGACGAGTAG |
| Gene | >Hirsu2|2259 ATGTCGGAAGACAAGGAAGCCGTTGGTAAGGACTGGCTGCTCTCGTTTTTTTGCTCCCTCGACGACGTCTTTTCG CTACCCCTCTTTCTTCGCTTCTGTGCGCGCTCTCCTTACCCCGCCAAAGCGAGCTTCCCCCGCCTCTCCCCGCCT CTCCCCTCGCCTCCCCTCGCCTCCCCTCGCCTCGCCTCCCCCCCAGCAAGCAGCTCGCCCGGCAGCTCCTTGGAG GCGGATGAGCGCTGCAAGCTGGCGGCCCCCGTGCGCAATGAGCAGGCAGAATCGCCGGATGCCGACGACTCGAGG CTGACGCCCTGCTGACTGCCCGCCAGACTACTCCCTCAACAACCCCGACACGCTCACCAAGTACAAGACGGCCGG CCAGATCTCCCAAAAGGTCCTGGCTGCCGTCGCTGAGCTCTGTGTGCCCGGGGCCAAGATTGTCGACATCTGCCA AAAGGGCGACAAGCTGATCGAGGAGGAGATTGCCAAGGTCTACCGAGGCAAAAAGGTCAACAAAGGTCCGATTGA GCCCCCCCCCTCGGCAGAGGGTGAGAATGCGCAAGACCTGCCGTGCTGACATCTAGGCGGGAAAAAAAAAGGCTT CTCCCACCCCACCACTGTCTCGCCCGCCTCTTATGTCACCCCCTACACCCCCTTGACGTCGGATGAGAGCGAGGC CTCGCTTGAGATCCAGCCGGGCGAACCCATCAAGATCCAGCTGGGGGCCCAGATTGACGGCTTCGGCGCCATTGT CTGTGACACCATCCTGGCCAACCCCAAGGACAAGGCCCAGGAGCCCGTCTCGGGCCGCCCTGCCGACCTGATTCT CGCCACTCACCACGCCAACGAGCTGCTCCTGCGGCTCATGCTCCCTCCCGGTCTGCTGGCCCAAGGCACCGACGA GGAAAAGGCCAAGGCGGCGGCGCAGAAGGCTCCCACCCAGGCCAAGATCACGAGCCTGCTGGACAAGGTCTGCGA GAGCTACGGCTGCCACCTCGTCGAGAGCACCACCTCCTGGCTCTTTGACCGCAACGAGATTGAGGGCTCCAAGAA GATTGTGCTTGCGCCCGCCGAAGGCACCAAGGGCGAGGGCGTGCCCGAGACGTCCGAGGTGTGGGGGGTTGAAAT GGGCGTCAGCTTGGGCTCCGGCAAGGTCAAGACGCTCGATCAGCGTGCAACGCTTCATCGCCGCACCACGCAGAC GTACGGCTTGAAGCGGCCCACGTCGCGCAAGATCCTGTCCGAAGTGCAGAAGAAGTTTGGCACCTTCCCCTTCAG CCTGAGGCAGCTCGAGGACGAACGGGATGCCAAGTCGGGCGTCGTCGAATGCGTGCGCGGTAACGTTTTCCGCCA GTATGAGCTGGTCGGCGACAAGGACAGTGCTCCTGTCGCCCGGCTCCTGACAACCATTGGTGAGTAGGCGGGCCG CGGTCGGGTTGGCGGTGCTAACGAGGGCAAACCAGTCATCACCAAGAACGGCATTACCAAGCTCGGCGGGCCTCC CGCGCTGGATGAGAGCAAGTTCAAGACGGACAAGAAGATCACGGATGAGGAAGTGCTCAAGATTCTCGAGCAGCC CCTGTGCAGAAACACGGGCAAGAAGAAGAGCAAGGCCAAGAAGAAGAAGAAGCCGGCGAAGAAGGCGGCAGGCGG AGAATCGGATGACGATTCGGATGACAGCGACGAGTAG |