Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2257
Gene name
Location	Contig_1528:1143..2182
Strand	-
Gene length (bp)	1039
Transcript length (bp)	837
Coding sequence length (bp)	837
Protein length (aa)	279

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09597	IGR	IGR protein motif	4.4E-23	67	122

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q75EY2\|FYV4_ASHGO	Protein FYV4, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FYV4 PE=3 SV=1	56	136	2.0E-10
sp\|Q6FW13\|FYV4_CANGA	Protein FYV4, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FYV4 PE=3 SV=1	56	123	1.0E-08
sp\|Q6C3R3\|FYV4_YARLI	Protein FYV4, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=FYV4 PE=3 SV=2	67	123	1.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2257 MDKDGTSRSAMRAEQLRPCLRLLLARGGVGGGAGQTTTTTTTTTRGLHKTRPPPTVPAPRPFVPDVQTFLTLIGR GMNKHTAKFPTWESLFSLTSPELKALGVEPARSRRYLLQWLDRYRAGDLGPGGDFQHVRDGLALLKVALPPASVP SSARWVVNVPLERGEAAAATATAETAAAAAAETTTTAAAGTTAATPLPPKVVRPGGYVVRGLRTIVGPYATQLPG SGGATVKVREGMWEFRRGRKIDGGERRRTEIRFKRRSAERREEREAEAGFGAV*
Coding	>Hirsu2\|2257 ATGGATAAGGACGGCACCTCTAGATCAGCCATGAGAGCAGAACAGCTGCGGCCGTGCCTGCGACTGCTGCTGGCA CGGGGGGGCGTCGGCGGCGGCGCGGGCCAGACGACGACGACGACGACGACGACGACGAGAGGGCTTCACAAGACG CGACCGCCCCCGACGGTGCCGGCGCCGCGGCCGTTCGTGCCCGATGTGCAGACCTTCCTCACGCTCATCGGGCGG GGCATGAACAAGCACACGGCCAAGTTCCCGACGTGGGAGTCGCTCTTCTCCCTCACGTCGCCCGAGCTCAAGGCG CTCGGGGTCGAGCCGGCGCGGAGCCGGCGGTACCTGCTGCAGTGGCTGGACCGGTACCGGGCCGGCGACTTGGGC CCCGGCGGCGACTTCCAGCACGTCAGGGACGGGCTGGCCTTGCTCAAGGTGGCGTTGCCGCCGGCGTCGGTGCCC AGCAGCGCCAGGTGGGTGGTCAATGTGCCGCTCGAGCGGGGCGAGGCGGCGGCGGCTACGGCGACGGCGGAGACG GCGGCGGCGGCTGCGGCGGAGACGACGACGACGGCTGCGGCGGGGACGACGGCCGCGACGCCGCTGCCGCCCAAG GTCGTGCGGCCGGGCGGGTACGTCGTCAGGGGCCTCAGGACCATCGTCGGGCCGTACGCGACGCAGCTGCCGGGC TCGGGCGGCGCCACCGTCAAGGTCAGAGAGGGCATGTGGGAGTTCCGACGCGGACGCAAGATCGATGGCGGCGAG CGGCGCCGCACCGAGATCCGGTTCAAGAGGCGCTCTGCCGAGCGCAGGGAGGAGCGCGAGGCCGAGGCGGGGTTC GGCGCCGTGTAA
Transcript	>Hirsu2\|2257 ATGGATAAGGACGGCACCTCTAGATCAGCCATGAGAGCAGAACAGCTGCGGCCGTGCCTGCGACTGCTGCTGGCA CGGGGGGGCGTCGGCGGCGGCGCGGGCCAGACGACGACGACGACGACGACGACGACGAGAGGGCTTCACAAGACG CGACCGCCCCCGACGGTGCCGGCGCCGCGGCCGTTCGTGCCCGATGTGCAGACCTTCCTCACGCTCATCGGGCGG GGCATGAACAAGCACACGGCCAAGTTCCCGACGTGGGAGTCGCTCTTCTCCCTCACGTCGCCCGAGCTCAAGGCG CTCGGGGTCGAGCCGGCGCGGAGCCGGCGGTACCTGCTGCAGTGGCTGGACCGGTACCGGGCCGGCGACTTGGGC CCCGGCGGCGACTTCCAGCACGTCAGGGACGGGCTGGCCTTGCTCAAGGTGGCGTTGCCGCCGGCGTCGGTGCCC AGCAGCGCCAGGTGGGTGGTCAATGTGCCGCTCGAGCGGGGCGAGGCGGCGGCGGCTACGGCGACGGCGGAGACG GCGGCGGCGGCTGCGGCGGAGACGACGACGACGGCTGCGGCGGGGACGACGGCCGCGACGCCGCTGCCGCCCAAG GTCGTGCGGCCGGGCGGGTACGTCGTCAGGGGCCTCAGGACCATCGTCGGGCCGTACGCGACGCAGCTGCCGGGC TCGGGCGGCGCCACCGTCAAGGTCAGAGAGGGCATGTGGGAGTTCCGACGCGGACGCAAGATCGATGGCGGCGAG CGGCGCCGCACCGAGATCCGGTTCAAGAGGCGCTCTGCCGAGCGCAGGGAGGAGCGCGAGGCCGAGGCGGGGTTC GGCGCCGTGTAA
Gene	>Hirsu2\|2257 ATGGATAAGGACGGGTAGGGTGGGGCCGAAGAAGCGCCACAGCCTCGCTTACTAACGCCACTAAGACGTCGAAAA TTCGCGACTCTGCTGCTGCTACATCGCGCAACGGCCTCGTCAGAAGGTCATGTTGGCAGCTGTGCCGGCCCAGCA CCTCTAGATCAGGTAAGCTTCGAACCAATGGCGACGAGACTCCACGCGCAAAGAGCACACCTTACTGACGGCGGG ATAAGCCATGAGAGCAGAACAGCTGCGGCCGTGCCTGCGACTGCTGCTGGCACGGGGGGGCGTCGGCGGCGGCGC GGGCCAGACGACGACGACGACGACGACGACGACGAGAGGGCTTCACAAGACGCGACCGCCCCCGACGGTGCCGGC GCCGCGGCCGTTCGTGCCCGATGTGCAGACCTTCCTCACGCTCATCGGGCGGGGCATGAACAAGCACACGGCCAA GTTCCCGACGTGGGAGTCGCTCTTCTCCCTCACGTCGCCCGAGCTCAAGGCGCTCGGGGTCGAGCCGGCGCGGAG CCGGCGGTACCTGCTGCAGTGGCTGGACCGGTACCGGGCCGGCGACTTGGGCCCCGGCGGCGACTTCCAGCACGT CAGGGACGGGCTGGCCTTGCTCAAGGTGGCGTTGCCGCCGGCGTCGGTGCCCAGCAGCGCCAGGTGGGTGGTCAA TGTGCCGCTCGAGCGGGGCGAGGCGGCGGCGGCTACGGCGACGGCGGAGACGGCGGCGGCGGCTGCGGCGGAGAC GACGACGACGGCTGCGGCGGGGACGACGGCCGCGACGCCGCTGCCGCCCAAGGTCGTGCGGCCGGGCGGGTACGT CGTCAGGGGCCTCAGGACCATCGTCGGGCCGTACGCGACGCAGCTGCCGGGCTCGGGCGGCGCCACCGTCAAGGT CAGAGAGGGCATGTGGGAGTTCCGACGCGGACGCAAGATCGATGGCGGCGAGCGGCGCCGCACCGAGATCCGGTT CAAGAGGCGCTCTGCCGAGCGCAGGGAGGAGCGCGAGGCCGAGGCGGGGTTCGGCGCCGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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