Protein ID | Hirsu2|2257 |
Gene name | |
Location | Contig_1528:1143..2182 |
Strand | - |
Gene length (bp) | 1039 |
Transcript length (bp) | 837 |
Coding sequence length (bp) | 837 |
Protein length (aa) | 279 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09597 | IGR | IGR protein motif | 4.4E-23 | 67 | 122 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q75EY2|FYV4_ASHGO | Protein FYV4, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FYV4 PE=3 SV=1 | 56 | 136 | 2.0E-10 |
sp|Q6FW13|FYV4_CANGA | Protein FYV4, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FYV4 PE=3 SV=1 | 56 | 123 | 1.0E-08 |
sp|Q6C3R3|FYV4_YARLI | Protein FYV4, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=FYV4 PE=3 SV=2 | 67 | 123 | 1.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.1286 | 0.1828 | 0.086 | 0.0748 | 0.9556 | 0.0312 | 0.0384 | 0.0256 | 0.0233 | 0.0193 |
Orthofinder run ID | 4 |
Orthogroup | 2009 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2257 MDKDGTSRSAMRAEQLRPCLRLLLARGGVGGGAGQTTTTTTTTTRGLHKTRPPPTVPAPRPFVPDVQTFLTLIGR GMNKHTAKFPTWESLFSLTSPELKALGVEPARSRRYLLQWLDRYRAGDLGPGGDFQHVRDGLALLKVALPPASVP SSARWVVNVPLERGEAAAATATAETAAAAAAETTTTAAAGTTAATPLPPKVVRPGGYVVRGLRTIVGPYATQLPG SGGATVKVREGMWEFRRGRKIDGGERRRTEIRFKRRSAERREEREAEAGFGAV* |
Coding | >Hirsu2|2257 ATGGATAAGGACGGCACCTCTAGATCAGCCATGAGAGCAGAACAGCTGCGGCCGTGCCTGCGACTGCTGCTGGCA CGGGGGGGCGTCGGCGGCGGCGCGGGCCAGACGACGACGACGACGACGACGACGACGAGAGGGCTTCACAAGACG CGACCGCCCCCGACGGTGCCGGCGCCGCGGCCGTTCGTGCCCGATGTGCAGACCTTCCTCACGCTCATCGGGCGG GGCATGAACAAGCACACGGCCAAGTTCCCGACGTGGGAGTCGCTCTTCTCCCTCACGTCGCCCGAGCTCAAGGCG CTCGGGGTCGAGCCGGCGCGGAGCCGGCGGTACCTGCTGCAGTGGCTGGACCGGTACCGGGCCGGCGACTTGGGC CCCGGCGGCGACTTCCAGCACGTCAGGGACGGGCTGGCCTTGCTCAAGGTGGCGTTGCCGCCGGCGTCGGTGCCC AGCAGCGCCAGGTGGGTGGTCAATGTGCCGCTCGAGCGGGGCGAGGCGGCGGCGGCTACGGCGACGGCGGAGACG GCGGCGGCGGCTGCGGCGGAGACGACGACGACGGCTGCGGCGGGGACGACGGCCGCGACGCCGCTGCCGCCCAAG GTCGTGCGGCCGGGCGGGTACGTCGTCAGGGGCCTCAGGACCATCGTCGGGCCGTACGCGACGCAGCTGCCGGGC TCGGGCGGCGCCACCGTCAAGGTCAGAGAGGGCATGTGGGAGTTCCGACGCGGACGCAAGATCGATGGCGGCGAG CGGCGCCGCACCGAGATCCGGTTCAAGAGGCGCTCTGCCGAGCGCAGGGAGGAGCGCGAGGCCGAGGCGGGGTTC GGCGCCGTGTAA |
Transcript | >Hirsu2|2257 ATGGATAAGGACGGCACCTCTAGATCAGCCATGAGAGCAGAACAGCTGCGGCCGTGCCTGCGACTGCTGCTGGCA CGGGGGGGCGTCGGCGGCGGCGCGGGCCAGACGACGACGACGACGACGACGACGACGAGAGGGCTTCACAAGACG CGACCGCCCCCGACGGTGCCGGCGCCGCGGCCGTTCGTGCCCGATGTGCAGACCTTCCTCACGCTCATCGGGCGG GGCATGAACAAGCACACGGCCAAGTTCCCGACGTGGGAGTCGCTCTTCTCCCTCACGTCGCCCGAGCTCAAGGCG CTCGGGGTCGAGCCGGCGCGGAGCCGGCGGTACCTGCTGCAGTGGCTGGACCGGTACCGGGCCGGCGACTTGGGC CCCGGCGGCGACTTCCAGCACGTCAGGGACGGGCTGGCCTTGCTCAAGGTGGCGTTGCCGCCGGCGTCGGTGCCC AGCAGCGCCAGGTGGGTGGTCAATGTGCCGCTCGAGCGGGGCGAGGCGGCGGCGGCTACGGCGACGGCGGAGACG GCGGCGGCGGCTGCGGCGGAGACGACGACGACGGCTGCGGCGGGGACGACGGCCGCGACGCCGCTGCCGCCCAAG GTCGTGCGGCCGGGCGGGTACGTCGTCAGGGGCCTCAGGACCATCGTCGGGCCGTACGCGACGCAGCTGCCGGGC TCGGGCGGCGCCACCGTCAAGGTCAGAGAGGGCATGTGGGAGTTCCGACGCGGACGCAAGATCGATGGCGGCGAG CGGCGCCGCACCGAGATCCGGTTCAAGAGGCGCTCTGCCGAGCGCAGGGAGGAGCGCGAGGCCGAGGCGGGGTTC GGCGCCGTGTAA |
Gene | >Hirsu2|2257 ATGGATAAGGACGGGTAGGGTGGGGCCGAAGAAGCGCCACAGCCTCGCTTACTAACGCCACTAAGACGTCGAAAA TTCGCGACTCTGCTGCTGCTACATCGCGCAACGGCCTCGTCAGAAGGTCATGTTGGCAGCTGTGCCGGCCCAGCA CCTCTAGATCAGGTAAGCTTCGAACCAATGGCGACGAGACTCCACGCGCAAAGAGCACACCTTACTGACGGCGGG ATAAGCCATGAGAGCAGAACAGCTGCGGCCGTGCCTGCGACTGCTGCTGGCACGGGGGGGCGTCGGCGGCGGCGC GGGCCAGACGACGACGACGACGACGACGACGACGAGAGGGCTTCACAAGACGCGACCGCCCCCGACGGTGCCGGC GCCGCGGCCGTTCGTGCCCGATGTGCAGACCTTCCTCACGCTCATCGGGCGGGGCATGAACAAGCACACGGCCAA GTTCCCGACGTGGGAGTCGCTCTTCTCCCTCACGTCGCCCGAGCTCAAGGCGCTCGGGGTCGAGCCGGCGCGGAG CCGGCGGTACCTGCTGCAGTGGCTGGACCGGTACCGGGCCGGCGACTTGGGCCCCGGCGGCGACTTCCAGCACGT CAGGGACGGGCTGGCCTTGCTCAAGGTGGCGTTGCCGCCGGCGTCGGTGCCCAGCAGCGCCAGGTGGGTGGTCAA TGTGCCGCTCGAGCGGGGCGAGGCGGCGGCGGCTACGGCGACGGCGGAGACGGCGGCGGCGGCTGCGGCGGAGAC GACGACGACGGCTGCGGCGGGGACGACGGCCGCGACGCCGCTGCCGCCCAAGGTCGTGCGGCCGGGCGGGTACGT CGTCAGGGGCCTCAGGACCATCGTCGGGCCGTACGCGACGCAGCTGCCGGGCTCGGGCGGCGCCACCGTCAAGGT CAGAGAGGGCATGTGGGAGTTCCGACGCGGACGCAAGATCGATGGCGGCGAGCGGCGCCGCACCGAGATCCGGTT CAAGAGGCGCTCTGCCGAGCGCAGGGAGGAGCGCGAGGCCGAGGCGGGGTTCGGCGCCGTGTAA |