© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2252 |
| Gene name | |
| Location | Contig_1526:68..1244 |
| Strand | - |
| Gene length (bp) | 1176 |
| Transcript length (bp) | 1029 |
| Coding sequence length (bp) | 1029 |
| Protein length (aa) | 343 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10290 | YJL171C_Tos1_N | Cell wall protein YJL171C/Tos1, N-terminal | 3.1E-20 | 41 | 101 |
| PF10287 | YJL171C_Tos1_C | Cell wall protein YJL171C/Tos1, C-terminal | 5.3E-15 | 277 | 337 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AQ83|PGA52_ARTBC | PGA52-like protein ARB_06390 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06390 PE=3 SV=1 | 7 | 160 | 2.0E-20 |
| sp|Q9P7X4|YH6B_SCHPO | Uncharacterized serine-rich protein P23A10.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP23A10.11c PE=2 SV=1 | 5 | 336 | 2.0E-13 |
| sp|P38288|TOS1_YEAST | Protein TOS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOS1 PE=1 SV=1 | 6 | 142 | 1.0E-12 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 25 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2252 MGPDSLLLLASAGWAAALTQQCSGTAVKDGGNWYCGRVGRILYQGLNGRGGSYKDVTAMDSNGRCDFEDKPYSGP LAPLDEGLSIHFRGPCHIDEVAVYTPSRRRRPGAAAARRARAQRRAKRAPEKEPDMVTAVINGVTVSWRNNWFGP PAATTAPDPPPAVEAPPPSDAPAPVAQGPPRADETPEAPPTDALERYLRHAAFRPAPSPAEATRAREEPWASALS ASDSSPASHTSSPSRPPSEYVPDTSNDVGAGEDWPAEEQGPDEESSSSNGDQWERIAQYNASGQVAENMVFMANY GGGRWPGVFDHSWGNSLTYLNADGTDGTDSPQILNDRGAVRR* |
| Coding | >Hirsu2|2252 ATGGGCCCCGACTCCCTGCTGCTGCTCGCCTCGGCGGGCTGGGCAGCGGCCCTGACACAGCAGTGCTCCGGCACG GCCGTCAAGGACGGCGGGAACTGGTACTGCGGCCGGGTCGGCCGCATCCTCTACCAGGGGCTGAACGGCCGCGGC GGGAGCTACAAGGACGTCACGGCCATGGACTCGAACGGCCGTTGCGACTTCGAGGACAAGCCCTACTCCGGCCCG CTCGCTCCGCTGGACGAGGGTCTCTCGATCCATTTCCGCGGGCCCTGCCACATCGACGAAGTCGCCGTCTACACC CCCTCGCGCAGGAGACGGCCCGGCGCGGCTGCGGCCCGGCGCGCCCGCGCCCAGCGACGCGCGAAGCGGGCGCCC GAGAAGGAGCCGGACATGGTGACGGCCGTCATCAACGGCGTCACCGTCTCGTGGAGGAACAACTGGTTCGGCCCG CCCGCCGCCACCACCGCCCCGGACCCGCCCCCGGCTGTCGAAGCCCCTCCTCCGTCCGATGCTCCCGCGCCTGTT GCCCAGGGCCCGCCTCGCGCCGACGAGACCCCCGAGGCTCCTCCGACTGACGCCCTCGAGCGGTATCTTCGTCAC GCCGCCTTCCGTCCTGCGCCCAGCCCGGCCGAGGCCACTCGCGCTCGTGAAGAACCTTGGGCGAGCGCACTTTCA GCTTCAGACTCTTCTCCCGCCTCTCACACGTCGTCTCCCTCGCGTCCGCCGTCCGAATATGTCCCCGACACGTCC AACGACGTCGGCGCGGGAGAGGACTGGCCTGCCGAGGAGCAAGGGCCGGACGAGGAGTCTTCGTCGTCCAACGGC GACCAATGGGAACGCATCGCGCAGTACAACGCCTCGGGGCAGGTCGCGGAGAACATGGTATTCATGGCCAACTAC GGCGGCGGCCGGTGGCCCGGCGTCTTCGACCACTCGTGGGGAAACTCTTTGACCTACCTCAACGCCGACGGCACC GACGGCACCGACTCGCCTCAGATCCTGAACGACCGCGGAGCCGTGCGACGATGA |
| Transcript | >Hirsu2|2252 ATGGGCCCCGACTCCCTGCTGCTGCTCGCCTCGGCGGGCTGGGCAGCGGCCCTGACACAGCAGTGCTCCGGCACG GCCGTCAAGGACGGCGGGAACTGGTACTGCGGCCGGGTCGGCCGCATCCTCTACCAGGGGCTGAACGGCCGCGGC GGGAGCTACAAGGACGTCACGGCCATGGACTCGAACGGCCGTTGCGACTTCGAGGACAAGCCCTACTCCGGCCCG CTCGCTCCGCTGGACGAGGGTCTCTCGATCCATTTCCGCGGGCCCTGCCACATCGACGAAGTCGCCGTCTACACC CCCTCGCGCAGGAGACGGCCCGGCGCGGCTGCGGCCCGGCGCGCCCGCGCCCAGCGACGCGCGAAGCGGGCGCCC GAGAAGGAGCCGGACATGGTGACGGCCGTCATCAACGGCGTCACCGTCTCGTGGAGGAACAACTGGTTCGGCCCG CCCGCCGCCACCACCGCCCCGGACCCGCCCCCGGCTGTCGAAGCCCCTCCTCCGTCCGATGCTCCCGCGCCTGTT GCCCAGGGCCCGCCTCGCGCCGACGAGACCCCCGAGGCTCCTCCGACTGACGCCCTCGAGCGGTATCTTCGTCAC GCCGCCTTCCGTCCTGCGCCCAGCCCGGCCGAGGCCACTCGCGCTCGTGAAGAACCTTGGGCGAGCGCACTTTCA GCTTCAGACTCTTCTCCCGCCTCTCACACGTCGTCTCCCTCGCGTCCGCCGTCCGAATATGTCCCCGACACGTCC AACGACGTCGGCGCGGGAGAGGACTGGCCTGCCGAGGAGCAAGGGCCGGACGAGGAGTCTTCGTCGTCCAACGGC GACCAATGGGAACGCATCGCGCAGTACAACGCCTCGGGGCAGGTCGCGGAGAACATGGTATTCATGGCCAACTAC GGCGGCGGCCGGTGGCCCGGCGTCTTCGACCACTCGTGGGGAAACTCTTTGACCTACCTCAACGCCGACGGCACC GACGGCACCGACTCGCCTCAGATCCTGAACGACCGCGGAGCCGTGCGACGATGA |
| Gene | >Hirsu2|2252 ATGGGCCCCGACTCCCTGCTGCTGCTCGCCTCGGCGGGCTGGGCAGCGGCCCTGACACAGCAGTGCTCCGGCACG GCCGTCAAGGACGGCGGGAACTGGTACTGCGGCCGGGTCGGCCGCATCCTCTACCAGGGGCTGAACGGCCGCGGC GGGAGCTACAAGGACGTCACGGCCATGGACTCGAACGGCCGTTGCGACTTCGAGGACAAGCCCTACTCCGGCCCG CTCGCTCCGCTGGACGAGGGTGTAAGAGAAGCCCTCCTCCGGCGTGGCCCCGTCGTCTGACACGCCGCAGCTCTC GATCCATTTCCGCGGGCCCTGCCACATCGACGAAGTCGCCGTCTACACCCCCTCGCGCAGGAGACGGCCCGGCGC GGCTGCGGCCCGGCGCGCCCGCGCCCAGCGACGCGCGAAGCGGGCGCCCGAGAAGGAGCCGGACATGGTGACGGC CGTCATCAACGGCGTCACCGTCTCGTGGAGGAACAACTGGTTCGGCCCGCCCGCCGCCACCACCGCCCCGGACCC GCCCCCGGCTGTCGAAGCCCCTCCTCCGTCCGATGCTCCCGCGCCTGTTGCCCAGGGCCCGCCTCGCGCCGACGA GACCCCCGAGGCTCCTCCGACTGACGCCCTCGAGCGGTATCTTCGTCACGCCGCCTTCCGTCCTGCGCCCAGCCC GGCCGAGGCCACTCGCGCTCGTGAAGAACCTTGGGCGAGCGCACTTTCAGCTTCAGACTCTTCTCCCGCCTCTCA CACGTCGTCTCCCTCGCGTCCGCCGTCCGAATATGTCCCCGACACGTCCAACGACGTCGGCGCGGGAGAGGACTG GCCTGCCGAGGAGCAAGGGCCGGACGAGGAGTCTTCGTCGTCCAACGGCGACCAATGGGAACGCATCGCGCAGTA CAACGCCTCGGGGCAGGTCGCGGAGAACATGGTATTCATGGCCAACTACGGCGGCGGCCGGTGGCCCGGCGTCTT CGACCAGTAAGGCCCCGTCCCGTCACTCTCGGCCTCCTCCGTATACTGACGGCACGGCGGCGGCAGCTCGTGGGG AAACTCTTTGACCTACCTCAACGCCGACGGCACCGACGGCACCGACTCGCCTCAGATCCTGAACGACGTCTTCAT CCCGTCCGGCAAGGAGTTGTCCATCTTCAGCGCGGAGCCGTGCGACGATGA |