Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2251
Gene name
LocationContig_1525:238..2395
Strand+
Gene length (bp)2157
Transcript length (bp)2097
Coding sequence length (bp)2097
Protein length (aa) 699

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09441 Abp2 ARS binding protein 2 1.3E-78 29 197

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9USY4|ABP2_SCHPO ARS-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=abp2 PE=1 SV=1 29 181 2.0E-28

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2251
MDRPANDAGHAPAAVPSAEPAPALPSVALPPRDVTADSIEDAYVRFIFYCNPALPPDADTDSLREAFRSPPRSGG
KVFHPFTIYQLVTRFYAKEIRTWTELTTLLGVEPPDLTKDESAQKVAQYGVRLKKWMNSMHVRAFFEYLMNMPND
YWTQIPPDPSPIALPVRDGVAIEDDMALRALIPTIRPKRGRKRPELDDATGSSAQKMRVSSPSAAEDRQQAPPSW
PPHAPGDGTTPADADTAQNGAGWRRNDSLQTPLGRWPHSAATPTSRGSFWDDALEPRSAVTPSRTKPSSHRRGAK
NVSSAWKPGGIDSGGKQRGRPPVNRTPVDTPSPAAQAWKWTQDGGNSAETGFAAAPPPAPSQYQHAGQSHMNGQG
ATHAAGGPLGPQDGSRPSRPSISLQVPERQGGSVRAATPPAPYPGVTANGKQTAGGVSKDLGPGAADASAAAAAA
AAAAAAASAGGGTAQQTARQGAPQTKQAPADGWQRFAKEATDAYEQASNVPSNGCDGPENMPEYYFEKMEDRTNV
DALVSYFVRSMSDSEWVDLNGNPDQPASVEESTAIVNAMLQNMYKTSTSPQAFLINLAALAGSMTLVTSRPKCVR
VGENDESYIYKCDWEYRFGHVKGSFTMPQYVPRTMWKKPEQGSGGSGESGEQQQTPLTADDWKRKYQALTEEVDK
RTKELSELRTKVMTSLGREWMEP*
Coding >Hirsu2|2251
ATGGACCGTCCGGCCAACGACGCGGGCCATGCTCCGGCCGCCGTGCCGTCCGCCGAACCCGCCCCGGCCCTGCCG
TCCGTCGCCCTGCCCCCGCGCGACGTCACGGCCGACAGCATCGAGGACGCCTACGTCCGCTTCATCTTCTACTGC
AACCCCGCTCTGCCGCCTGACGCCGACACCGACAGCCTGAGGGAGGCCTTCCGCAGCCCGCCCAGGAGCGGCGGC
AAGGTCTTCCACCCCTTCACCATCTACCAACTTGTCACCAGGTTCTACGCCAAGGAGATCAGGACGTGGACCGAG
CTGACGACGCTTCTCGGCGTCGAGCCCCCCGACCTCACCAAGGACGAGAGCGCCCAAAAGGTGGCCCAGTACGGC
GTCCGCTTAAAGAAATGGATGAACTCGATGCACGTCCGCGCCTTCTTCGAGTACCTCATGAACATGCCCAACGAC
TACTGGACCCAAATCCCGCCGGACCCCAGTCCCATCGCCCTCCCGGTCCGCGACGGCGTCGCCATCGAGGACGAC
ATGGCTCTGCGCGCGCTCATCCCGACCATACGCCCTAAGAGGGGCCGCAAGAGACCCGAGCTGGACGACGCCACC
GGCTCCTCCGCCCAGAAAATGCGAGTGTCGTCTCCTTCTGCGGCAGAAGACCGTCAGCAGGCGCCGCCGTCGTGG
CCGCCCCACGCTCCAGGAGACGGCACGACGCCCGCGGACGCGGACACGGCGCAGAACGGCGCGGGGTGGCGGCGG
AACGACTCGCTGCAGACACCCCTGGGCCGGTGGCCGCATTCGGCCGCGACGCCGACGTCGAGGGGCTCGTTCTGG
GACGACGCCCTTGAGCCCCGGTCTGCGGTAACGCCATCCCGAACGAAGCCCTCCAGTCACAGGCGGGGGGCCAAG
AACGTGTCGTCTGCCTGGAAGCCTGGCGGGATCGACTCCGGCGGCAAGCAGCGCGGGCGCCCGCCCGTCAATCGC
ACGCCGGTCGACACGCCCAGCCCTGCCGCGCAGGCGTGGAAGTGGACACAAGACGGTGGCAACTCGGCCGAGACT
GGCTTCGCCGCGGCGCCGCCTCCCGCCCCGAGCCAGTATCAGCACGCAGGCCAGTCTCACATGAACGGACAGGGG
GCGACGCACGCGGCCGGCGGTCCCCTCGGGCCACAAGATGGCTCAAGACCCTCCCGGCCGAGCATCTCGCTGCAA
GTCCCGGAGCGTCAGGGAGGCTCCGTGCGGGCAGCGACGCCTCCGGCGCCCTATCCTGGCGTGACGGCCAATGGG
AAGCAAACGGCCGGCGGAGTGAGTAAGGATTTGGGTCCCGGAGCCGCCGATGCTTCTGCCGCTGCCGCTGCCGCC
GCCGCCGCCGCCGCCGCCGCGTCCGCCGGCGGCGGCACGGCTCAGCAAACCGCAAGGCAAGGCGCCCCGCAGACG
AAGCAGGCACCGGCCGACGGTTGGCAGCGGTTCGCGAAGGAGGCGACGGACGCCTACGAGCAAGCAAGCAACGTG
CCGAGCAACGGGTGCGACGGACCGGAGAACATGCCCGAGTACTACTTCGAGAAGATGGAGGACCGAACCAACGTG
GACGCGCTCGTGTCGTACTTTGTCCGATCCATGTCCGACTCGGAGTGGGTAGACCTCAACGGCAACCCGGACCAG
CCGGCGTCGGTGGAGGAGTCGACGGCGATTGTCAACGCGATGCTGCAGAACATGTACAAGACGTCGACGTCGCCG
CAGGCGTTCCTCATCAACCTGGCGGCGCTGGCGGGCTCCATGACGCTGGTGACGAGTCGGCCCAAGTGCGTGCGG
GTGGGGGAAAACGACGAGTCGTACATCTACAAGTGCGACTGGGAGTACCGGTTCGGGCATGTCAAGGGCAGCTTC
ACGATGCCGCAGTACGTGCCGCGGACCATGTGGAAGAAGCCGGAGCAGGGCAGCGGCGGCAGCGGCGAGTCGGGC
GAACAACAGCAGACGCCGCTGACGGCGGACGACTGGAAGAGGAAGTACCAGGCGCTGACGGAAGAAGTGGACAAG
CGCACCAAGGAGCTGTCGGAACTCCGAACCAAGGTGATGACGTCTCTGGGGCGTGAGTGGATGGAGCCGTAA
Transcript >Hirsu2|2251
ATGGACCGTCCGGCCAACGACGCGGGCCATGCTCCGGCCGCCGTGCCGTCCGCCGAACCCGCCCCGGCCCTGCCG
TCCGTCGCCCTGCCCCCGCGCGACGTCACGGCCGACAGCATCGAGGACGCCTACGTCCGCTTCATCTTCTACTGC
AACCCCGCTCTGCCGCCTGACGCCGACACCGACAGCCTGAGGGAGGCCTTCCGCAGCCCGCCCAGGAGCGGCGGC
AAGGTCTTCCACCCCTTCACCATCTACCAACTTGTCACCAGGTTCTACGCCAAGGAGATCAGGACGTGGACCGAG
CTGACGACGCTTCTCGGCGTCGAGCCCCCCGACCTCACCAAGGACGAGAGCGCCCAAAAGGTGGCCCAGTACGGC
GTCCGCTTAAAGAAATGGATGAACTCGATGCACGTCCGCGCCTTCTTCGAGTACCTCATGAACATGCCCAACGAC
TACTGGACCCAAATCCCGCCGGACCCCAGTCCCATCGCCCTCCCGGTCCGCGACGGCGTCGCCATCGAGGACGAC
ATGGCTCTGCGCGCGCTCATCCCGACCATACGCCCTAAGAGGGGCCGCAAGAGACCCGAGCTGGACGACGCCACC
GGCTCCTCCGCCCAGAAAATGCGAGTGTCGTCTCCTTCTGCGGCAGAAGACCGTCAGCAGGCGCCGCCGTCGTGG
CCGCCCCACGCTCCAGGAGACGGCACGACGCCCGCGGACGCGGACACGGCGCAGAACGGCGCGGGGTGGCGGCGG
AACGACTCGCTGCAGACACCCCTGGGCCGGTGGCCGCATTCGGCCGCGACGCCGACGTCGAGGGGCTCGTTCTGG
GACGACGCCCTTGAGCCCCGGTCTGCGGTAACGCCATCCCGAACGAAGCCCTCCAGTCACAGGCGGGGGGCCAAG
AACGTGTCGTCTGCCTGGAAGCCTGGCGGGATCGACTCCGGCGGCAAGCAGCGCGGGCGCCCGCCCGTCAATCGC
ACGCCGGTCGACACGCCCAGCCCTGCCGCGCAGGCGTGGAAGTGGACACAAGACGGTGGCAACTCGGCCGAGACT
GGCTTCGCCGCGGCGCCGCCTCCCGCCCCGAGCCAGTATCAGCACGCAGGCCAGTCTCACATGAACGGACAGGGG
GCGACGCACGCGGCCGGCGGTCCCCTCGGGCCACAAGATGGCTCAAGACCCTCCCGGCCGAGCATCTCGCTGCAA
GTCCCGGAGCGTCAGGGAGGCTCCGTGCGGGCAGCGACGCCTCCGGCGCCCTATCCTGGCGTGACGGCCAATGGG
AAGCAAACGGCCGGCGGAGTGAGTAAGGATTTGGGTCCCGGAGCCGCCGATGCTTCTGCCGCTGCCGCTGCCGCC
GCCGCCGCCGCCGCCGCCGCGTCCGCCGGCGGCGGCACGGCTCAGCAAACCGCAAGGCAAGGCGCCCCGCAGACG
AAGCAGGCACCGGCCGACGGTTGGCAGCGGTTCGCGAAGGAGGCGACGGACGCCTACGAGCAAGCAAGCAACGTG
CCGAGCAACGGGTGCGACGGACCGGAGAACATGCCCGAGTACTACTTCGAGAAGATGGAGGACCGAACCAACGTG
GACGCGCTCGTGTCGTACTTTGTCCGATCCATGTCCGACTCGGAGTGGGTAGACCTCAACGGCAACCCGGACCAG
CCGGCGTCGGTGGAGGAGTCGACGGCGATTGTCAACGCGATGCTGCAGAACATGTACAAGACGTCGACGTCGCCG
CAGGCGTTCCTCATCAACCTGGCGGCGCTGGCGGGCTCCATGACGCTGGTGACGAGTCGGCCCAAGTGCGTGCGG
GTGGGGGAAAACGACGAGTCGTACATCTACAAGTGCGACTGGGAGTACCGGTTCGGGCATGTCAAGGGCAGCTTC
ACGATGCCGCAGTACGTGCCGCGGACCATGTGGAAGAAGCCGGAGCAGGGCAGCGGCGGCAGCGGCGAGTCGGGC
GAACAACAGCAGACGCCGCTGACGGCGGACGACTGGAAGAGGAAGTACCAGGCGCTGACGGAAGAAGTGGACAAG
CGCACCAAGGAGCTGTCGGAACTCCGAACCAAGGTGATGACGTCTCTGGGGCGTGAGTGGATGGAGCCGTAA
Gene >Hirsu2|2251
ATGGACCGTCCGGCCAACGACGCGGGCCATGCTCCGGCCGCCGTGCCGTCCGCCGAACCCGCCCCGGCCCTGCCG
TCCGTCGCCCTGCCCCCGCGCGACGTCACGGCCGACAGCATCGAGGACGCCTACGTCCGCTTCATCTTCTACTGC
AACCCCGCTCTGCCGCCTGACGCCGACACCGACAGCCTGAGGGAGGCCTTCCGCAGCCCGCCCAGGAGCGGCGGC
AAGGTCTTCCACCCCTTCACCATCTACCAACTTGTCACCAGGTTCTACGCCAAGGAGATCAGGACGTGGACCGAG
CTGACGACGCTTCTCGGCGTCGAGCCCCCCGACCTCACCAAGGACGAGAGCGCCCAAAAGGTGGCCCAGTACGGC
GTCCGCTTAAAGGTACGTCGAGGGCCGTCGCCCCCGTCCTGCCGCTGCGCCAGCCGCTAAAAGCAGGTCCAGAAA
TGGATGAACTCGATGCACGTCCGCGCCTTCTTCGAGTACCTCATGAACATGCCCAACGACTACTGGACCCAAATC
CCGCCGGACCCCAGTCCCATCGCCCTCCCGGTCCGCGACGGCGTCGCCATCGAGGACGACATGGCTCTGCGCGCG
CTCATCCCGACCATACGCCCTAAGAGGGGCCGCAAGAGACCCGAGCTGGACGACGCCACCGGCTCCTCCGCCCAG
AAAATGCGAGTGTCGTCTCCTTCTGCGGCAGAAGACCGTCAGCAGGCGCCGCCGTCGTGGCCGCCCCACGCTCCA
GGAGACGGCACGACGCCCGCGGACGCGGACACGGCGCAGAACGGCGCGGGGTGGCGGCGGAACGACTCGCTGCAG
ACACCCCTGGGCCGGTGGCCGCATTCGGCCGCGACGCCGACGTCGAGGGGCTCGTTCTGGGACGACGCCCTTGAG
CCCCGGTCTGCGGTAACGCCATCCCGAACGAAGCCCTCCAGTCACAGGCGGGGGGCCAAGAACGTGTCGTCTGCC
TGGAAGCCTGGCGGGATCGACTCCGGCGGCAAGCAGCGCGGGCGCCCGCCCGTCAATCGCACGCCGGTCGACACG
CCCAGCCCTGCCGCGCAGGCGTGGAAGTGGACACAAGACGGTGGCAACTCGGCCGAGACTGGCTTCGCCGCGGCG
CCGCCTCCCGCCCCGAGCCAGTATCAGCACGCAGGCCAGTCTCACATGAACGGACAGGGGGCGACGCACGCGGCC
GGCGGTCCCCTCGGGCCACAAGATGGCTCAAGACCCTCCCGGCCGAGCATCTCGCTGCAAGTCCCGGAGCGTCAG
GGAGGCTCCGTGCGGGCAGCGACGCCTCCGGCGCCCTATCCTGGCGTGACGGCCAATGGGAAGCAAACGGCCGGC
GGAGTGAGTAAGGATTTGGGTCCCGGAGCCGCCGATGCTTCTGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCGCC
GCCGCGTCCGCCGGCGGCGGCACGGCTCAGCAAACCGCAAGGCAAGGCGCCCCGCAGACGAAGCAGGCACCGGCC
GACGGTTGGCAGCGGTTCGCGAAGGAGGCGACGGACGCCTACGAGCAAGCAAGCAACGTGCCGAGCAACGGGTGC
GACGGACCGGAGAACATGCCCGAGTACTACTTCGAGAAGATGGAGGACCGAACCAACGTGGACGCGCTCGTGTCG
TACTTTGTCCGATCCATGTCCGACTCGGAGTGGGTAGACCTCAACGGCAACCCGGACCAGCCGGCGTCGGTGGAG
GAGTCGACGGCGATTGTCAACGCGATGCTGCAGAACATGTACAAGACGTCGACGTCGCCGCAGGCGTTCCTCATC
AACCTGGCGGCGCTGGCGGGCTCCATGACGCTGGTGACGAGTCGGCCCAAGTGCGTGCGGGTGGGGGAAAACGAC
GAGTCGTACATCTACAAGTGCGACTGGGAGTACCGGTTCGGGCATGTCAAGGGCAGCTTCACGATGCCGCAGTAC
GTGCCGCGGACCATGTGGAAGAAGCCGGAGCAGGGCAGCGGCGGCAGCGGCGAGTCGGGCGAACAACAGCAGACG
CCGCTGACGGCGGACGACTGGAAGAGGAAGTACCAGGCGCTGACGGAAGAAGTGGACAAGCGCACCAAGGAGCTG
TCGGAACTCCGAACCAAGGTGATGACGTCTCTGGGGCGTGAGTGGATGGAGCCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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