© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2249 |
| Gene name | |
| Location | Contig_1524:1510..3358 |
| Strand | + |
| Gene length (bp) | 1848 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 2.4E-28 | 69 | 498 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C8V329|FCY2_EMENI | Purine-cytosine permease fcyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fcyB PE=1 SV=1 | 18 | 519 | 4.0E-76 |
| sp|P53099|TPN1_YEAST | Vitamin B6 transporter TPN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPN1 PE=1 SV=1 | 4 | 519 | 6.0E-75 |
| sp|Q874L4|TPN1_YEASX | Vitamin B6 transporter TPN1 OS=Saccharomyces cerevisiae GN=TPN1 PE=3 SV=1 | 4 | 519 | 9.0E-75 |
| sp|P17064|FCY2_YEAST | Purine-cytosine permease FCY2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FCY2 PE=1 SV=2 | 3 | 519 | 1.0E-65 |
| sp|Q12119|FCY22_YEAST | Purine-cytosine permease FCY22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FCY22 PE=3 SV=1 | 17 | 519 | 4.0E-63 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C8V329|FCY2_EMENI | Purine-cytosine permease fcyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fcyB PE=1 SV=1 | 18 | 519 | 4.0E-76 |
| sp|P53099|TPN1_YEAST | Vitamin B6 transporter TPN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPN1 PE=1 SV=1 | 4 | 519 | 6.0E-75 |
| sp|Q874L4|TPN1_YEASX | Vitamin B6 transporter TPN1 OS=Saccharomyces cerevisiae GN=TPN1 PE=3 SV=1 | 4 | 519 | 9.0E-75 |
| sp|P17064|FCY2_YEAST | Purine-cytosine permease FCY2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FCY2 PE=1 SV=2 | 3 | 519 | 1.0E-65 |
| sp|Q12119|FCY22_YEAST | Purine-cytosine permease FCY22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FCY22 PE=3 SV=1 | 17 | 519 | 4.0E-63 |
| sp|P40039|FCY21_YEAST | Purine-cytosine permease FCY21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FCY21 PE=1 SV=2 | 18 | 519 | 6.0E-62 |
| sp|P94369|YXLA_BACSU | Putative purine-cytosine permease YxlA OS=Bacillus subtilis (strain 168) GN=yxlA PE=3 SV=1 | 59 | 515 | 2.0E-18 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lysosome/Vacuole|Golgi apparatus | Signal peptide|Transmembrane domain | 0.1193 | 0.095 | 0.1112 | 0.3055 | 0.2155 | 0.0037 | 0.3129 | 0.7042 | 0.7028 | 0.0237 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 92 | 111 | 19 |
| 2 | 115 | 137 | 22 |
| 3 | 158 | 177 | 19 |
| 4 | 192 | 214 | 22 |
| 5 | 221 | 240 | 19 |
| 6 | 260 | 282 | 22 |
| 7 | 303 | 325 | 22 |
| 8 | 345 | 367 | 22 |
| 9 | 387 | 404 | 17 |
| 10 | 409 | 431 | 22 |
| 11 | 452 | 474 | 22 |
| 12 | 487 | 509 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 2004 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2249 MAIRRTSTASPGATVAAELLDDKGAVLSTTPSAEDEEAAVPAPSRLRALNARIEALAGLEARGITRVLPEERRPA SLSDDLQVAIMWFSANISLNNLAAGMLGPLLLGLGFVDCALLAVAGAFVGSLTTAYMSIWGPQSGNRTMVVLRFF MGYWPSKIPCLLNVVLMVGYATIDGIIGGQVLSAVSGGHMSIIVGIVVVSVVCWVVAVFGMALFHKYERYSWLPQ VLALFVLIGVAGPHFDASSRSKASGALLAAQRLSFFNVCLYVPNSWAAAASDFYVYYPERTSRPKIFCLTLAGLW TAFCLVYLLGAGLGTGVAAGVPAWAAANDVSSGALVVAAYEPLAGFGRVCAVVVALGVIANSIPSTYSAALGCQT LGGRRAKAVPRWLWSSLLVLVELVLAVAGREHLFLIFQNFLALMGYWVMVMVVIVLEEHLLFRRAAGFDWARWED RAYLPAGWAAAAAFLLGCAGAVLGMSQAWYVGPLARLSATADVGLWVGCGFTLLAFAPLRRLELRLIGR* |
| Coding | >Hirsu2|2249 ATGGCGATCCGACGGACGTCGACGGCCTCGCCCGGTGCTACCGTGGCGGCCGAGCTGCTGGACGACAAGGGCGCG GTGCTGAGCACGACGCCGTCGGCCGAGGACGAGGAGGCGGCCGTGCCGGCGCCGTCGCGGCTGCGGGCCCTCAAC GCCCGGATCGAGGCCCTGGCCGGGCTCGAGGCCCGCGGCATCACGCGCGTGCTGCCCGAGGAGCGCCGGCCGGCC AGCCTGTCCGACGACCTGCAGGTGGCCATCATGTGGTTCAGCGCCAACATCTCGCTCAACAACCTGGCGGCCGGC ATGCTGGGCCCGCTGCTGCTCGGTCTCGGCTTCGTCGACTGCGCCCTGCTGGCCGTGGCCGGCGCCTTTGTCGGC AGCCTGACGACGGCCTACATGAGCATCTGGGGCCCGCAGAGCGGCAACCGGACCATGGTTGTGCTGCGCTTCTTC ATGGGCTACTGGCCCTCCAAGATCCCGTGCCTCCTCAACGTCGTCCTCATGGTCGGCTACGCCACCATCGACGGT ATTATTGGCGGGCAGGTCCTGTCCGCCGTCAGCGGCGGGCACATGAGCATCATCGTCGGCATCGTCGTCGTCTCC GTCGTCTGCTGGGTCGTTGCCGTCTTCGGCATGGCCCTCTTTCACAAATACGAACGATACTCGTGGCTCCCGCAA GTGCTGGCGCTCTTCGTCCTGATCGGCGTGGCCGGGCCGCACTTCGACGCGTCGTCGCGGTCCAAGGCGTCGGGC GCGCTGCTGGCGGCGCAGCGGCTGTCCTTCTTCAACGTCTGCCTGTACGTGCCCAACTCGTGGGCGGCGGCGGCG TCCGACTTCTACGTCTACTACCCGGAGCGGACGTCGCGGCCCAAGATCTTCTGCCTGACGCTGGCCGGCCTCTGG ACCGCCTTCTGCCTCGTCTACCTGCTCGGGGCCGGGCTCGGGACCGGGGTGGCGGCCGGGGTGCCGGCGTGGGCG GCCGCCAACGACGTCAGCTCGGGCGCGCTCGTCGTGGCCGCCTACGAGCCGCTGGCCGGCTTCGGCCGCGTCTGC GCCGTCGTCGTCGCCCTCGGCGTCATCGCCAACTCCATCCCCAGCACCTACTCGGCCGCGCTCGGCTGCCAGACG CTGGGCGGCCGCCGCGCCAAGGCCGTCCCGCGCTGGCTCTGGTCCTCGCTGCTGGTCCTGGTCGAGCTGGTCCTG GCCGTGGCCGGCCGCGAGCACCTGTTCCTCATCTTCCAGAACTTCCTCGCCCTCATGGGCTACTGGGTCATGGTC ATGGTCGTCATCGTCCTCGAGGAGCACCTGCTCTTCCGCCGCGCCGCCGGCTTCGACTGGGCCCGCTGGGAGGAC CGGGCTTATCTGCCGGCCGGCTGGGCCGCCGCCGCCGCCTTCCTGCTCGGCTGCGCCGGCGCCGTCCTCGGCATG AGCCAGGCCTGGTACGTCGGCCCGCTGGCCCGCCTGTCCGCCACCGCCGACGTCGGTCTTTGGGTCGGCTGCGGC TTCACTCTGCTTGCCTTCGCGCCGCTGCGCCGCCTCGAGCTGCGCCTCATCGGCCGCTGA |
| Transcript | >Hirsu2|2249 ATGGCGATCCGACGGACGTCGACGGCCTCGCCCGGTGCTACCGTGGCGGCCGAGCTGCTGGACGACAAGGGCGCG GTGCTGAGCACGACGCCGTCGGCCGAGGACGAGGAGGCGGCCGTGCCGGCGCCGTCGCGGCTGCGGGCCCTCAAC GCCCGGATCGAGGCCCTGGCCGGGCTCGAGGCCCGCGGCATCACGCGCGTGCTGCCCGAGGAGCGCCGGCCGGCC AGCCTGTCCGACGACCTGCAGGTGGCCATCATGTGGTTCAGCGCCAACATCTCGCTCAACAACCTGGCGGCCGGC ATGCTGGGCCCGCTGCTGCTCGGTCTCGGCTTCGTCGACTGCGCCCTGCTGGCCGTGGCCGGCGCCTTTGTCGGC AGCCTGACGACGGCCTACATGAGCATCTGGGGCCCGCAGAGCGGCAACCGGACCATGGTTGTGCTGCGCTTCTTC ATGGGCTACTGGCCCTCCAAGATCCCGTGCCTCCTCAACGTCGTCCTCATGGTCGGCTACGCCACCATCGACGGT ATTATTGGCGGGCAGGTCCTGTCCGCCGTCAGCGGCGGGCACATGAGCATCATCGTCGGCATCGTCGTCGTCTCC GTCGTCTGCTGGGTCGTTGCCGTCTTCGGCATGGCCCTCTTTCACAAATACGAACGATACTCGTGGCTCCCGCAA GTGCTGGCGCTCTTCGTCCTGATCGGCGTGGCCGGGCCGCACTTCGACGCGTCGTCGCGGTCCAAGGCGTCGGGC GCGCTGCTGGCGGCGCAGCGGCTGTCCTTCTTCAACGTCTGCCTGTACGTGCCCAACTCGTGGGCGGCGGCGGCG TCCGACTTCTACGTCTACTACCCGGAGCGGACGTCGCGGCCCAAGATCTTCTGCCTGACGCTGGCCGGCCTCTGG ACCGCCTTCTGCCTCGTCTACCTGCTCGGGGCCGGGCTCGGGACCGGGGTGGCGGCCGGGGTGCCGGCGTGGGCG GCCGCCAACGACGTCAGCTCGGGCGCGCTCGTCGTGGCCGCCTACGAGCCGCTGGCCGGCTTCGGCCGCGTCTGC GCCGTCGTCGTCGCCCTCGGCGTCATCGCCAACTCCATCCCCAGCACCTACTCGGCCGCGCTCGGCTGCCAGACG CTGGGCGGCCGCCGCGCCAAGGCCGTCCCGCGCTGGCTCTGGTCCTCGCTGCTGGTCCTGGTCGAGCTGGTCCTG GCCGTGGCCGGCCGCGAGCACCTGTTCCTCATCTTCCAGAACTTCCTCGCCCTCATGGGCTACTGGGTCATGGTC ATGGTCGTCATCGTCCTCGAGGAGCACCTGCTCTTCCGCCGCGCCGCCGGCTTCGACTGGGCCCGCTGGGAGGAC CGGGCTTATCTGCCGGCCGGCTGGGCCGCCGCCGCCGCCTTCCTGCTCGGCTGCGCCGGCGCCGTCCTCGGCATG AGCCAGGCCTGGTACGTCGGCCCGCTGGCCCGCCTGTCCGCCACCGCCGACGTCGGTCTTTGGGTCGGCTGCGGC TTCACTCTGCTTGCCTTCGCGCCGCTGCGCCGCCTCGAGCTGCGCCTCATCGGCCGCTGA |
| Gene | >Hirsu2|2249 ATGGCGATCCGACGGACGTCGACGGCCTCGCCCGGTGCTACCGTGGCGGCCGAGCTGCTGGACGACAAGGGCGCG GTGCTGAGCACGACGCCGTCGGCCGAGGACGAGGAGGCGGCCGTGCCGGCGCCGTCGCGGCTGCGGGCCCTCAAC GCCCGGATCGAGGCCCTGGCCGGGCTCGAGGCCCGCGGCATCACGCGCGTGCTGCCCGAGGAGCGCCGGCCGGCC AGCCTGTCCGACGACCTGCAGGTGGCCATCATGTGGTTCAGCGCCAACATCTCGCTCAACAACCTGGCGGCCGGC ATGCTGGGCCCGCTGCTGCTCGGTCTCGGCTTCGTCGACTGCGCCCTGCTGGCCGTGGCCGGCGCCTTTGTCGGC AGCCTGACGACGGCCTACATGAGCATCTGGGGCCCGCAGAGCGGCAACCGGACCATGGTCAGTATTCATCCGAGC CGTCCCCTCTTCCAGTCTTTCTCCTTCTCTCTCTCCGGGAAAGGACCGGGTCGGTGCCAGGCTGACCTCGCCGTT GTGTAGGTTGTGCTGCGCTTCTTCATGGGCTACTGGCCCTCCAAGATCCCGTGCCTCCTCAACGTCGTCCTCATG GTCGGCTACGCCACCATCGACGGTATTATTGGCGGGCAGGTCCTGTCCGCCGTCAGCGGCGGGCACATGAGCATC ATCGTCGGCATCGTCGTCGTCTCCGTCGTCTGCTGGGTCGTTGCCGTCTTCGGCATGGCCCTCTTTCACAAATAC GAACGGTATGCTGATTCCTGTTTCTCTCCCCCCTCCCCCTCGTCAGCAGAGCTGTTTTCCTGTCTTGTCTCCGTC GCCGGTATTATCAGTGTTGGTCTTGTCTGCTTGCCTGGAGAGACATGGTCTCTTGTTGTTGAATAGGAGAGAAAG AGGCACAGAGAGAGGCTGACGAGTGGATGATGCGGAATCGGCAGATACTCGTGGCTCCCGCAAGTGCTGGCGCTC TTCGTCCTGATCGGCGTGGCCGGGCCGCACTTCGACGCGTCGTCGCGGTCCAAGGCGTCGGGCGCGCTGCTGGCG GCGCAGCGGCTGTCCTTCTTCAACGTCTGCCTGTACGTGCCCAACTCGTGGGCGGCGGCGGCGTCCGACTTCTAC GTCTACTACCCGGAGCGGACGTCGCGGCCCAAGATCTTCTGCCTGACGCTGGCCGGCCTCTGGACCGCCTTCTGC CTCGTCTACCTGCTCGGGGCCGGGCTCGGGACCGGGGTGGCGGCCGGGGTGCCGGCGTGGGCGGCCGCCAACGAC GTCAGCTCGGGCGCGCTCGTCGTGGCCGCCTACGAGCCGCTGGCCGGCTTCGGCCGCGTCTGCGCCGTCGTCGTC GCCCTCGGCGTCATCGCCAACTCCATCCCCAGCACCTACTCGGCCGCGCTCGGCTGCCAGACGCTGGGCGGCCGC CGCGCCAAGGCCGTCCCGCGCTGGCTCTGGTCCTCGCTGCTGGTCCTGGTCGAGCTGGTCCTGGCCGTGGCCGGC CGCGAGCACCTGTTCCTCATCTTCCAGAACTTCCTCGCCCTCATGGGCTACTGGGTCATGGTCATGGTCGTCATC GTCCTCGAGGAGCACCTGCTCTTCCGCCGCGCCGCCGGCTTCGACTGGGCCCGCTGGGAGGACCGGGCTTATCTG CCGGCCGGCTGGGCCGCCGCCGCCGCCTTCCTGCTCGGCTGCGCCGGCGCCGTCCTCGGCATGAGCCAGGCCTGG TACGTCGGCCCGCTGGCCCGCCTGTCCGCCACCGCCGACGTCGGTCTTTGGGTCGGCTGCGGCTTCACTCTGCTT GCCTTCGCGCCGCTGCGCCGCCTCGAGCTGCGCCTCATCGGCCGCTGA |