Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2246
Gene name
LocationContig_1522:4088..4685
Strand-
Gene length (bp)597
Transcript length (bp)597
Coding sequence length (bp)597
Protein length (aa) 199

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.7162 0.4082 0.3905 0.0292 0.1676 0.0977 0.1276 0.2986 0.3913 0.0218

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6035
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1553
Ophiocordyceps australis 1348a (Ghana) OphauG2|2977
Ophiocordyceps subramaniannii Hirsu2|1376
Ophiocordyceps subramaniannii Hirsu2|2246 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6027

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2246
MICGVAERRRERILLEFQTIVGSIVILQKPLTTFALAQILEVEKRVIDDRLDLLRTVIDVPSSSASPVRLFHLYF
RNFLLDPDNRDSSPFWVDKELTHAALAANCLRVMMKHLRQDMCRVNVPAIKRSDINSDMIQAQLPLELQYACIHW
VCPVHGPAGRADNYEQVYTFLKSHSLHWIESHSLLGHAYEGIHRVRDL*
Coding >Hirsu2|2246
ATGATATGCGGAGTGGCGGAAAGGAGACGCGAGCGCATTCTTCTAGAGTTTCAAACCATTGTCGGCTCCATTGTC
ATTCTTCAAAAACCCCTTACGACATTTGCTCTGGCGCAGATACTCGAGGTCGAAAAGCGCGTCATTGACGATAGG
CTGGACCTGCTACGTACGGTTATTGACGTGCCGTCATCGTCGGCCTCGCCCGTGAGACTTTTCCACCTCTATTTT
CGCAACTTCCTGCTGGACCCCGACAACAGGGACAGCAGTCCTTTCTGGGTAGACAAGGAGCTCACTCACGCAGCC
TTGGCGGCGAACTGTTTGCGTGTCATGATGAAACATCTCCGACAAGACATGTGCCGGGTGAACGTCCCCGCCATC
AAGCGATCGGACATTAACTCCGACATGATCCAAGCCCAGCTCCCGCTGGAGTTGCAGTACGCCTGCATACATTGG
GTCTGTCCTGTTCATGGCCCCGCCGGCCGCGCCGACAACTACGAACAAGTCTACACGTTTCTTAAGTCGCACTCC
CTGCACTGGATAGAATCACATAGTCTCCTGGGCCACGCTTACGAGGGAATTCATCGTGTCAGGGACCTGTAG
Transcript >Hirsu2|2246
ATGATATGCGGAGTGGCGGAAAGGAGACGCGAGCGCATTCTTCTAGAGTTTCAAACCATTGTCGGCTCCATTGTC
ATTCTTCAAAAACCCCTTACGACATTTGCTCTGGCGCAGATACTCGAGGTCGAAAAGCGCGTCATTGACGATAGG
CTGGACCTGCTACGTACGGTTATTGACGTGCCGTCATCGTCGGCCTCGCCCGTGAGACTTTTCCACCTCTATTTT
CGCAACTTCCTGCTGGACCCCGACAACAGGGACAGCAGTCCTTTCTGGGTAGACAAGGAGCTCACTCACGCAGCC
TTGGCGGCGAACTGTTTGCGTGTCATGATGAAACATCTCCGACAAGACATGTGCCGGGTGAACGTCCCCGCCATC
AAGCGATCGGACATTAACTCCGACATGATCCAAGCCCAGCTCCCGCTGGAGTTGCAGTACGCCTGCATACATTGG
GTCTGTCCTGTTCATGGCCCCGCCGGCCGCGCCGACAACTACGAACAAGTCTACACGTTTCTTAAGTCGCACTCC
CTGCACTGGATAGAATCACATAGTCTCCTGGGCCACGCTTACGAGGGAATTCATCGTGTCAGGGACCTGTAG
Gene >Hirsu2|2246
ATGATATGCGGAGTGGCGGAAAGGAGACGCGAGCGCATTCTTCTAGAGTTTCAAACCATTGTCGGCTCCATTGTC
ATTCTTCAAAAACCCCTTACGACATTTGCTCTGGCGCAGATACTCGAGGTCGAAAAGCGCGTCATTGACGATAGG
CTGGACCTGCTACGTACGGTTATTGACGTGCCGTCATCGTCGGCCTCGCCCGTGAGACTTTTCCACCTCTATTTT
CGCAACTTCCTGCTGGACCCCGACAACAGGGACAGCAGTCCTTTCTGGGTAGACAAGGAGCTCACTCACGCAGCC
TTGGCGGCGAACTGTTTGCGTGTCATGATGAAACATCTCCGACAAGACATGTGCCGGGTGAACGTCCCCGCCATC
AAGCGATCGGACATTAACTCCGACATGATCCAAGCCCAGCTCCCGCTGGAGTTGCAGTACGCCTGCATACATTGG
GTCTGTCCTGTTCATGGCCCCGCCGGCCGCGCCGACAACTACGAACAAGTCTACACGTTTCTTAAGTCGCACTCC
CTGCACTGGATAGAATCACATAGTCTCCTGGGCCACGCTTACGAGGGAATTCATCGTGTCAGGGACCTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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