© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2244 |
| Gene name | |
| Location | Contig_1521:4474..5665 |
| Strand | - |
| Gene length (bp) | 1191 |
| Transcript length (bp) | 897 |
| Coding sequence length (bp) | 897 |
| Protein length (aa) | 299 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6677 | 0.3772 | 0.1089 | 0.019 | 0.5559 | 0.0201 | 0.1566 | 0.49 | 0.2546 | 0.0856 |
| Orthofinder run ID | 4 |
| Orthogroup | 6973 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|01309 |
| Ophiocordyceps kimflemingae | Ophio5|1851 |
| Ophiocordyceps subramaniannii | Hirsu2|2244 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2244 MLPKASVFTSPPAQLMGLLAERLPSSLTILRRLQFALRDESSPQHARIIVGSDRGALGPGPTEPRSYTVAYADFS AGPDAQTVLYSTLEDGQAVGDGGRSEHEQQLACVVDELVRLRSEHGRGWRPPPRLLLGSLHADVRAILERTGRLQ GRSSGIYDKWLFKVRDLPPAEERLPDGMYWGRATFADCRTVVARTDIPRTADFLVKLPNLVIKLQDHTPIAWGFL GVDGGLMSLHCEESYRRKGLARNLAIKLLRESTGYFTDDGGEGWTSADVSKDNSASQAVCRSLNGQTAWVVSW* |
| Coding | >Hirsu2|2244 ATGCTCCCCAAGGCCAGCGTCTTCACCTCGCCTCCCGCCCAGCTGATGGGCCTGCTGGCCGAGCGGCTGCCGTCG TCGCTGACGATCCTGCGCCGGCTGCAGTTCGCGCTGCGCGACGAGTCGTCGCCGCAGCACGCGCGCATCATCGTC GGCTCGGACCGCGGCGCCCTCGGCCCCGGCCCGACCGAGCCGCGGAGCTACACGGTGGCCTACGCCGACTTCTCG GCCGGGCCCGACGCCCAGACGGTTCTGTACTCGACGCTCGAGGACGGGCAGGCCGTCGGCGACGGCGGCCGGTCC GAGCACGAACAGCAGCTGGCCTGCGTCGTCGACGAGCTCGTCCGCCTGCGCAGCGAGCACGGCCGGGGCTGGAGG CCGCCGCCGCGCCTGCTGCTCGGCAGCCTGCACGCCGACGTCAGGGCCATCCTCGAGCGCACCGGCCGGCTGCAG GGCCGGTCCTCCGGCATCTACGACAAGTGGCTCTTCAAGGTCCGCGACCTGCCACCGGCCGAGGAGCGGCTGCCG GACGGGATGTACTGGGGCCGCGCCACGTTTGCGGACTGTCGGACCGTCGTGGCCCGGACGGACATTCCGCGGACC GCCGATTTTCTCGTCAAGCTGCCGAATCTCGTCATCAAGCTCCAAGACCATACGCCGATAGCGTGGGGCTTCCTG GGTGTGGACGGGGGCCTTATGAGTTTGCACTGCGAGGAAAGTTATCGTCGTAAGGGGCTTGCGAGGAACCTGGCC ATCAAACTGCTGAGAGAGAGCACGGGCTACTTCACCGACGATGGCGGCGAGGGATGGACATCAGCGGACGTGTCG AAGGATAACTCAGCAAGTCAGGCCGTCTGCAGAAGCTTGAATGGCCAGACTGCGTGGGTCGTTTCTTGGTAA |
| Transcript | >Hirsu2|2244 ATGCTCCCCAAGGCCAGCGTCTTCACCTCGCCTCCCGCCCAGCTGATGGGCCTGCTGGCCGAGCGGCTGCCGTCG TCGCTGACGATCCTGCGCCGGCTGCAGTTCGCGCTGCGCGACGAGTCGTCGCCGCAGCACGCGCGCATCATCGTC GGCTCGGACCGCGGCGCCCTCGGCCCCGGCCCGACCGAGCCGCGGAGCTACACGGTGGCCTACGCCGACTTCTCG GCCGGGCCCGACGCCCAGACGGTTCTGTACTCGACGCTCGAGGACGGGCAGGCCGTCGGCGACGGCGGCCGGTCC GAGCACGAACAGCAGCTGGCCTGCGTCGTCGACGAGCTCGTCCGCCTGCGCAGCGAGCACGGCCGGGGCTGGAGG CCGCCGCCGCGCCTGCTGCTCGGCAGCCTGCACGCCGACGTCAGGGCCATCCTCGAGCGCACCGGCCGGCTGCAG GGCCGGTCCTCCGGCATCTACGACAAGTGGCTCTTCAAGGTCCGCGACCTGCCACCGGCCGAGGAGCGGCTGCCG GACGGGATGTACTGGGGCCGCGCCACGTTTGCGGACTGTCGGACCGTCGTGGCCCGGACGGACATTCCGCGGACC GCCGATTTTCTCGTCAAGCTGCCGAATCTCGTCATCAAGCTCCAAGACCATACGCCGATAGCGTGGGGCTTCCTG GGTGTGGACGGGGGCCTTATGAGTTTGCACTGCGAGGAAAGTTATCGTCGTAAGGGGCTTGCGAGGAACCTGGCC ATCAAACTGCTGAGAGAGAGCACGGGCTACTTCACCGACGATGGCGGCGAGGGATGGACATCAGCGGACGTGTCG AAGGATAACTCAGCAAGTCAGGCCGTCTGCAGAAGCTTGAATGGCCAGACTGCGTGGGTCGTTTCTTGGTAA |
| Gene | >Hirsu2|2244 ATGCTCCCCAAGGCCAGCGTCTTCACCTCGCCTCCCGCCCAGCTGATGGGCCTGCTGGCCGAGCGGCTGCCGTCG TCGCTGACGATCCTGCGCCGGCTGCAGTTCGCGCTGCGCGACGAGTCGTCGCCGCAGCACGCGCGCATCATCGTC GGCTCGGACCGCGGCGCCCTCGGCCCCGGCCCGACCGAGCCGCGGAGCTACACGGTGGCCTACGCCGACTTCTCG GCCGGGCCCGACGCCCAGACGGTTCTGTACTCGACGCTCGAGGACGGGCAGGCCGTCGGCGACGGCGGCCGGTCC GAGCACGAACAGCAGCTGGCCTGCGTCGTCGACGAGCTCGTCCGCCTGCGCAGCGAGCACGGCCGGGGCTGGAGG CCGCCGCCGCGCCTGCTGCTCGGCAGCCTGCACGCCGACGTCAGGGCCATCCTCGAGCGCACCGGCCGGCTGCAG GGCCGGTCCTCCGGCATCTACGACAAGTGGCTCTTCAAGGTCCGCGACCTGCCACCGGCCGAGGAGCGGCTGCCG GACGGGATGTACTGGGGCCGCGCCACGTTTGCGGACTGTCGGACCGTCGTGGCCCGGACGGACATTCCGCGGACC GCGTAAGCATCCAGTCGTCTATCCCCCCTCCCGGGCGTGATCTTGGGGCCTTTCCCGCGTGTTGTGTCTGACTTC GCGCTGCGCTGGACTCCGTTGAACAGCGATTTTCTCGTCAAGCTGCCGAATCTCGTCATCAAGCTCCAAGACCAT ACGCCGATAGCGTGGGGCTTCCTGGGTAAGGTCTGGCCCTGTATCGAGTCCTCTAGAGAGCTAACACAACGACGG TCATAAGGTGTGGACGGGGGCCTTATGAGTTTGCACTGCGAGGTACGTAGTCATCTCGAGGAAGCATACACCTCC TCATCACGCTGCCCGCCATCCTCACTCCATCCTGGTCATTCGTCGAACCACCGCTGTTCCTCAACACGAGCTGAA CTTTTCCACCGCTGGCTCTCCCCGCTCTAGGAAAGTTATCGTCGTAAGGGGCTTGCGAGGAACCTGGCCATCAAA CTGCTGAGAGAGAGCACGGGCTACTTCACCGACGATGGCGGCGAGGGATGGACATCAGCGGACGTGTCGAAGGAT AACTCAGCAAGTCAGGCCGTCTGCAGAAGCTTGAATGGCCAGACTGCGTGGGTCGTTTCTTGGTAA |