© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2242 |
| Gene name | |
| Location | Contig_1520:3232..5370 |
| Strand | + |
| Gene length (bp) | 2138 |
| Transcript length (bp) | 2079 |
| Coding sequence length (bp) | 2079 |
| Protein length (aa) | 693 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.7062 | 0.3123 | 0.075 | 0.4042 | 0.1585 | 0.0144 | 0.1614 | 0.1676 | 0.1508 | 0.0964 |
| Orthofinder run ID | 4 |
| Orthogroup | 2002 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2242 MPWKAASGVGSLARPRTGHRSIRGHISGPIPIPAPTADRADDELPMRDPVAAAAVAWHGNEATTNGAPAGSREPG RRQRQHPVDVPFTDSSRADSLRADAHQEARAFADTSHPAQDHQPDSAVHSDTNHARSPMDGPNRKKSTFRSALSR LLGRSKKGSLSHVGGDSLDKSTPAEASAQHHRSDPIGDERPPKTVETKRSASLPITEYDRALRSHSVGPQDVLAI QSARNSLNAEARTPTKRSGASDTASTHLAPARRTEARRSTGLGPRPASSHDRRPRLTDWIEDPSEIGWAITSDAK GLKRRSRSLSAFPSTEGAFTAVTRRRSDEIRHWRESYNPASSMPCLADEAEDAAILATDAPDVTGRPRSSIPPFI FGGVPSVKEASGLKITEAASLDSRVSTLEARMSRLEQIVAGLAESLAGSVPPTDHAAAVPPPAEHGGARESTLAP EGDEDAASGLRHPDATRTMFGGDGITFLDITPRATMMPRHPSPDASRPLSLATVCGAVNTSSVPRNAADVVTTDH YLTLVTLLETERSAREMLESQVRRLGHQVRLATKLGGHAHTGRCDFSAAEGSLGGTSAFDHDDDDDDDDDDDHEK DLINGGARHSPGSFGALPVSSSTMWAHHEDEDDEEEGYTESYATPNEDGDRSAAGDEDHDVASKTAARALSLSRL TLGAPQPSPHQLSPQAI* |
| Coding | >Hirsu2|2242 ATGCCCTGGAAGGCTGCCTCTGGCGTTGGCTCCCTCGCGAGGCCGCGGACCGGCCACCGGTCGATCAGGGGCCAC ATCTCCGGCCCGATCCCGATCCCGGCGCCGACCGCCGACCGCGCCGACGACGAGCTCCCCATGCGCGATCCTGTC GCCGCCGCCGCCGTTGCATGGCATGGTAACGAGGCGACGACAAACGGCGCACCGGCAGGGTCCCGCGAGCCGGGC CGTCGCCAGCGGCAGCACCCCGTCGACGTGCCCTTTACCGACTCGTCCCGCGCAGACTCCCTTCGCGCTGATGCC CATCAGGAAGCGAGGGCCTTCGCCGACACGAGCCACCCGGCCCAGGACCACCAGCCGGACTCGGCCGTCCACTCA GATACCAACCACGCTCGGAGCCCCATGGACGGTCCCAATCGCAAGAAGTCGACCTTCAGGTCCGCCCTGAGCAGG CTGCTCGGACGCAGCAAGAAGGGCAGCCTCTCCCATGTAGGCGGCGACTCGCTCGACAAGTCGACTCCGGCCGAG GCCTCGGCTCAGCATCACCGCAGTGATCCAATCGGCGACGAACGCCCCCCCAAAACCGTCGAGACGAAACGGTCG GCATCTCTGCCCATCACCGAGTACGACCGGGCGCTGCGGTCCCACTCCGTCGGCCCGCAGGACGTGTTGGCCATC CAGAGCGCGAGGAACTCGCTCAACGCCGAGGCGAGGACGCCCACCAAGAGGAGCGGCGCCTCCGACACGGCCTCG ACGCATCTTGCCCCCGCCCGCCGGACCGAGGCCCGGAGATCCACCGGCTTGGGCCCGCGCCCGGCGAGCTCCCAC GACCGCCGCCCTCGATTGACGGACTGGATCGAGGATCCGAGCGAGATCGGCTGGGCCATCACGAGCGACGCCAAG GGTCTGAAGCGTCGCTCGAGGAGCTTATCGGCCTTCCCCAGCACCGAAGGCGCCTTCACCGCCGTGACGAGGAGA CGGAGCGACGAGATCCGCCACTGGCGAGAGAGCTACAATCCCGCGTCGTCCATGCCGTGCCTCGCCGACGAGGCC GAAGACGCGGCCATCTTGGCGACCGACGCGCCCGACGTCACCGGCCGACCCCGCTCTTCCATTCCACCGTTCATC TTCGGAGGCGTGCCCTCGGTGAAAGAGGCGTCCGGTCTCAAGATCACCGAGGCGGCCAGCCTGGACTCGCGAGTC AGCACACTCGAGGCTCGGATGAGTCGGCTCGAACAGATTGTCGCCGGATTGGCCGAGTCTCTCGCGGGATCCGTT CCCCCGACAGACCACGCCGCTGCCGTCCCGCCTCCGGCAGAGCATGGCGGCGCGCGGGAGTCTACTCTGGCCCCG GAGGGAGACGAAGATGCGGCGAGCGGGCTGCGCCACCCGGACGCGACCAGGACGATGTTTGGCGGCGATGGTATC ACCTTCCTCGATATCACACCCCGAGCTACCATGATGCCTCGGCATCCAAGCCCAGACGCCAGTCGGCCACTGTCT TTGGCAACGGTGTGCGGCGCCGTCAACACGTCGTCCGTCCCCAGGAATGCCGCCGACGTGGTCACGACGGATCAC TACCTGACCCTGGTGACTTTGCTCGAGACGGAGCGTTCTGCCCGCGAGATGCTGGAATCCCAGGTCAGGAGACTG GGCCACCAGGTCAGACTGGCGACCAAGCTCGGTGGCCATGCTCATACCGGGAGGTGCGACTTCTCTGCGGCCGAG GGCTCCTTGGGCGGGACATCGGCATTCGACCACGACGATGATGACGATGATGACGACGATGACGATCATGAGAAA GACCTTATCAACGGCGGCGCTCGGCACTCCCCCGGCTCATTCGGAGCGCTCCCAGTCTCGTCCTCGACCATGTGG GCTCACCACGAGGATGAAGACGACGAGGAGGAGGGCTATACCGAGTCGTACGCAACGCCAAACGAGGACGGGGAC CGCTCGGCGGCCGGAGACGAGGATCACGACGTGGCCTCGAAGACGGCGGCCCGAGCCCTGTCCCTCTCGCGGCTG ACGCTGGGCGCTCCGCAGCCTTCGCCGCACCAACTTTCGCCGCAAGCCATCTGA |
| Transcript | >Hirsu2|2242 ATGCCCTGGAAGGCTGCCTCTGGCGTTGGCTCCCTCGCGAGGCCGCGGACCGGCCACCGGTCGATCAGGGGCCAC ATCTCCGGCCCGATCCCGATCCCGGCGCCGACCGCCGACCGCGCCGACGACGAGCTCCCCATGCGCGATCCTGTC GCCGCCGCCGCCGTTGCATGGCATGGTAACGAGGCGACGACAAACGGCGCACCGGCAGGGTCCCGCGAGCCGGGC CGTCGCCAGCGGCAGCACCCCGTCGACGTGCCCTTTACCGACTCGTCCCGCGCAGACTCCCTTCGCGCTGATGCC CATCAGGAAGCGAGGGCCTTCGCCGACACGAGCCACCCGGCCCAGGACCACCAGCCGGACTCGGCCGTCCACTCA GATACCAACCACGCTCGGAGCCCCATGGACGGTCCCAATCGCAAGAAGTCGACCTTCAGGTCCGCCCTGAGCAGG CTGCTCGGACGCAGCAAGAAGGGCAGCCTCTCCCATGTAGGCGGCGACTCGCTCGACAAGTCGACTCCGGCCGAG GCCTCGGCTCAGCATCACCGCAGTGATCCAATCGGCGACGAACGCCCCCCCAAAACCGTCGAGACGAAACGGTCG GCATCTCTGCCCATCACCGAGTACGACCGGGCGCTGCGGTCCCACTCCGTCGGCCCGCAGGACGTGTTGGCCATC CAGAGCGCGAGGAACTCGCTCAACGCCGAGGCGAGGACGCCCACCAAGAGGAGCGGCGCCTCCGACACGGCCTCG ACGCATCTTGCCCCCGCCCGCCGGACCGAGGCCCGGAGATCCACCGGCTTGGGCCCGCGCCCGGCGAGCTCCCAC GACCGCCGCCCTCGATTGACGGACTGGATCGAGGATCCGAGCGAGATCGGCTGGGCCATCACGAGCGACGCCAAG GGTCTGAAGCGTCGCTCGAGGAGCTTATCGGCCTTCCCCAGCACCGAAGGCGCCTTCACCGCCGTGACGAGGAGA CGGAGCGACGAGATCCGCCACTGGCGAGAGAGCTACAATCCCGCGTCGTCCATGCCGTGCCTCGCCGACGAGGCC GAAGACGCGGCCATCTTGGCGACCGACGCGCCCGACGTCACCGGCCGACCCCGCTCTTCCATTCCACCGTTCATC TTCGGAGGCGTGCCCTCGGTGAAAGAGGCGTCCGGTCTCAAGATCACCGAGGCGGCCAGCCTGGACTCGCGAGTC AGCACACTCGAGGCTCGGATGAGTCGGCTCGAACAGATTGTCGCCGGATTGGCCGAGTCTCTCGCGGGATCCGTT CCCCCGACAGACCACGCCGCTGCCGTCCCGCCTCCGGCAGAGCATGGCGGCGCGCGGGAGTCTACTCTGGCCCCG GAGGGAGACGAAGATGCGGCGAGCGGGCTGCGCCACCCGGACGCGACCAGGACGATGTTTGGCGGCGATGGTATC ACCTTCCTCGATATCACACCCCGAGCTACCATGATGCCTCGGCATCCAAGCCCAGACGCCAGTCGGCCACTGTCT TTGGCAACGGTGTGCGGCGCCGTCAACACGTCGTCCGTCCCCAGGAATGCCGCCGACGTGGTCACGACGGATCAC TACCTGACCCTGGTGACTTTGCTCGAGACGGAGCGTTCTGCCCGCGAGATGCTGGAATCCCAGGTCAGGAGACTG GGCCACCAGGTCAGACTGGCGACCAAGCTCGGTGGCCATGCTCATACCGGGAGGTGCGACTTCTCTGCGGCCGAG GGCTCCTTGGGCGGGACATCGGCATTCGACCACGACGATGATGACGATGATGACGACGATGACGATCATGAGAAA GACCTTATCAACGGCGGCGCTCGGCACTCCCCCGGCTCATTCGGAGCGCTCCCAGTCTCGTCCTCGACCATGTGG GCTCACCACGAGGATGAAGACGACGAGGAGGAGGGCTATACCGAGTCGTACGCAACGCCAAACGAGGACGGGGAC CGCTCGGCGGCCGGAGACGAGGATCACGACGTGGCCTCGAAGACGGCGGCCCGAGCCCTGTCCCTCTCGCGGCTG ACGCTGGGCGCTCCGCAGCCTTCGCCGCACCAACTTTCGCCGCAAGCCATCTGA |
| Gene | >Hirsu2|2242 ATGCCCTGGAAGGCTGCCTCTGGCGTTGGCTCCCTCGCGAGGCCGCGGACCGGCCACCGGTCGATCAGGGGCCAC ATCTCCGGCCCGATCCCGATCCCGGCGCCGACCGCCGACCGCGCCGACGACGAGCTCCCCATGCGCGATCCTGTC GCCGCCGCCGCCGTTGCATGGCATGGTAACGAGGCGACGACAAACGGCGCACCGGCAGGGTCCCGCGAGCCGGGC CGTCGCCAGCGGCAGCACCCCGTCGACGTGCCCTTTACCGACTCGTCCCGCGCAGACTCCCTTCGCGCTGATGCC CATCAGGAAGCGAGGGCCTTCGCCGACACGAGCCACCCGGCCCAGGACCACCAGCCGGACTCGGCCGTCCACTCA GATACCAACCACGCTCGGAGCCCCATGGACGGTCCCAATCGCAAGAAGTCGACCTTCAGGTCCGCCCTGAGCAGG CTGCTCGGACGCAGCAAGAAGGGCAGCCTCTCCCATGTAGGCGGCGACTCGCTCGACAAGTCGACTCCGGCCGAG GCCTCGGCTCAGCATCACCGCAGTGTAAGTGCCCCTTCCCCCACGGCCCTTCGTCGGCAGGGAGCTCATGGCCAG GTGTATAGGATCCAATCGGCGACGAACGCCCCCCCAAAACCGTCGAGACGAAACGGTCGGCATCTCTGCCCATCA CCGAGTACGACCGGGCGCTGCGGTCCCACTCCGTCGGCCCGCAGGACGTGTTGGCCATCCAGAGCGCGAGGAACT CGCTCAACGCCGAGGCGAGGACGCCCACCAAGAGGAGCGGCGCCTCCGACACGGCCTCGACGCATCTTGCCCCCG CCCGCCGGACCGAGGCCCGGAGATCCACCGGCTTGGGCCCGCGCCCGGCGAGCTCCCACGACCGCCGCCCTCGAT TGACGGACTGGATCGAGGATCCGAGCGAGATCGGCTGGGCCATCACGAGCGACGCCAAGGGTCTGAAGCGTCGCT CGAGGAGCTTATCGGCCTTCCCCAGCACCGAAGGCGCCTTCACCGCCGTGACGAGGAGACGGAGCGACGAGATCC GCCACTGGCGAGAGAGCTACAATCCCGCGTCGTCCATGCCGTGCCTCGCCGACGAGGCCGAAGACGCGGCCATCT TGGCGACCGACGCGCCCGACGTCACCGGCCGACCCCGCTCTTCCATTCCACCGTTCATCTTCGGAGGCGTGCCCT CGGTGAAAGAGGCGTCCGGTCTCAAGATCACCGAGGCGGCCAGCCTGGACTCGCGAGTCAGCACACTCGAGGCTC GGATGAGTCGGCTCGAACAGATTGTCGCCGGATTGGCCGAGTCTCTCGCGGGATCCGTTCCCCCGACAGACCACG CCGCTGCCGTCCCGCCTCCGGCAGAGCATGGCGGCGCGCGGGAGTCTACTCTGGCCCCGGAGGGAGACGAAGATG CGGCGAGCGGGCTGCGCCACCCGGACGCGACCAGGACGATGTTTGGCGGCGATGGTATCACCTTCCTCGATATCA CACCCCGAGCTACCATGATGCCTCGGCATCCAAGCCCAGACGCCAGTCGGCCACTGTCTTTGGCAACGGTGTGCG GCGCCGTCAACACGTCGTCCGTCCCCAGGAATGCCGCCGACGTGGTCACGACGGATCACTACCTGACCCTGGTGA CTTTGCTCGAGACGGAGCGTTCTGCCCGCGAGATGCTGGAATCCCAGGTCAGGAGACTGGGCCACCAGGTCAGAC TGGCGACCAAGCTCGGTGGCCATGCTCATACCGGGAGGTGCGACTTCTCTGCGGCCGAGGGCTCCTTGGGCGGGA CATCGGCATTCGACCACGACGATGATGACGATGATGACGACGATGACGATCATGAGAAAGACCTTATCAACGGCG GCGCTCGGCACTCCCCCGGCTCATTCGGAGCGCTCCCAGTCTCGTCCTCGACCATGTGGGCTCACCACGAGGATG AAGACGACGAGGAGGAGGGCTATACCGAGTCGTACGCAACGCCAAACGAGGACGGGGACCGCTCGGCGGCCGGAG ACGAGGATCACGACGTGGCCTCGAAGACGGCGGCCCGAGCCCTGTCCCTCTCGCGGCTGACGCTGGGCGCTCCGC AGCCTTCGCCGCACCAACTTTCGCCGCAAGCCATCTGA |