Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2236
Gene name
LocationContig_152:11077..11716
Strand-
Gene length (bp)639
Transcript length (bp)639
Coding sequence length (bp)639
Protein length (aa) 213

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00011 HSP20 Hsp20/alpha crystallin family 2.6E-12 140 211

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P19752|HSP30_NEUCR 30 kDa heat shock protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=hsp30 PE=3 SV=1 1 212 5.0E-67
sp|P40920|HSP30_EMENI 30 kDa heat shock protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hsp30 PE=2 SV=1 15 211 5.0E-42
sp|Q4UJB1|HSPC4_RICFE Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspc4-1 PE=3 SV=1 160 211 1.0E-08
sp|Q76NU5|HSPGC_DICDI Small heat shock protein hspG12 OS=Dictyostelium discoideum GN=hspG12 PE=3 SV=1 49 212 2.0E-08
sp|Q4UKR8|HSPC2_RICFE Small heat shock protein C2 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspC2 PE=3 SV=1 160 211 9.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P19752|HSP30_NEUCR 30 kDa heat shock protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=hsp30 PE=3 SV=1 1 212 5.0E-67
sp|P40920|HSP30_EMENI 30 kDa heat shock protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hsp30 PE=2 SV=1 15 211 5.0E-42
sp|Q4UJB1|HSPC4_RICFE Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspc4-1 PE=3 SV=1 160 211 1.0E-08
sp|Q76NU5|HSPGC_DICDI Small heat shock protein hspG12 OS=Dictyostelium discoideum GN=hspG12 PE=3 SV=1 49 212 2.0E-08
sp|Q4UKR8|HSPC2_RICFE Small heat shock protein C2 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspC2 PE=3 SV=1 160 211 9.0E-08
sp|Q8MMN1|HSPG6_DICDI Small heat shock protein hspG6 OS=Dictyostelium discoideum GN=hspG6 PE=3 SV=2 25 212 5.0E-07
sp|Q8MPA7|HSPG5_DICDI Small heat shock protein hspG5 OS=Dictyostelium discoideum GN=hspG5 PE=2 SV=2 25 212 4.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2236
MAFFPRNFYQPESSFTPLFRLLDDFDHYSRQSGDPHQQGRRTGLPSWQPKFDIRETGDNYELHGELPGMNKDNVH
IEFADPQTMHIRGRVERSYSAGTPPHAGQVEDAPARPAITEGEAAAKNSHQASVEDEDGDGSENQAVVDKAEPHQ
PQKPADKAKYWLTERSIGEFSRSFNFPGRIDQDGVSASFKDGILHIVVPKAKKHESRRIAIN*
Coding >Hirsu2|2236
ATGGCCTTCTTCCCGCGCAACTTCTACCAGCCGGAGTCGTCCTTCACGCCTCTCTTCCGCCTGCTCGACGACTTC
GACCACTACAGCCGCCAGTCGGGCGACCCGCACCAGCAGGGCCGTCGCACGGGCCTGCCCAGCTGGCAGCCCAAG
TTTGACATACGCGAGACGGGCGACAACTACGAGCTCCATGGCGAGCTGCCCGGCATGAACAAGGACAACGTCCAC
ATCGAGTTCGCCGACCCGCAGACGATGCACATCCGCGGCAGGGTCGAGCGCTCCTACTCGGCCGGCACGCCACCC
CACGCCGGCCAGGTCGAGGACGCGCCGGCCCGCCCGGCCATCACCGAGGGCGAGGCGGCGGCCAAAAACTCGCAT
CAGGCCAGCGTCGAGGACGAGGACGGCGACGGCTCGGAGAACCAGGCCGTCGTCGACAAGGCCGAGCCCCACCAG
CCGCAGAAGCCGGCGGACAAGGCCAAGTACTGGCTCACCGAGCGCAGCATCGGCGAGTTCTCGCGCAGCTTCAAC
TTCCCCGGACGCATTGACCAGGATGGTGTCTCGGCCAGCTTCAAGGACGGCATCCTGCATATCGTCGTCCCCAAG
GCCAAGAAGCACGAGTCTCGTCGCATCGCCATCAACTGA
Transcript >Hirsu2|2236
ATGGCCTTCTTCCCGCGCAACTTCTACCAGCCGGAGTCGTCCTTCACGCCTCTCTTCCGCCTGCTCGACGACTTC
GACCACTACAGCCGCCAGTCGGGCGACCCGCACCAGCAGGGCCGTCGCACGGGCCTGCCCAGCTGGCAGCCCAAG
TTTGACATACGCGAGACGGGCGACAACTACGAGCTCCATGGCGAGCTGCCCGGCATGAACAAGGACAACGTCCAC
ATCGAGTTCGCCGACCCGCAGACGATGCACATCCGCGGCAGGGTCGAGCGCTCCTACTCGGCCGGCACGCCACCC
CACGCCGGCCAGGTCGAGGACGCGCCGGCCCGCCCGGCCATCACCGAGGGCGAGGCGGCGGCCAAAAACTCGCAT
CAGGCCAGCGTCGAGGACGAGGACGGCGACGGCTCGGAGAACCAGGCCGTCGTCGACAAGGCCGAGCCCCACCAG
CCGCAGAAGCCGGCGGACAAGGCCAAGTACTGGCTCACCGAGCGCAGCATCGGCGAGTTCTCGCGCAGCTTCAAC
TTCCCCGGACGCATTGACCAGGATGGTGTCTCGGCCAGCTTCAAGGACGGCATCCTGCATATCGTCGTCCCCAAG
GCCAAGAAGCACGAGTCTCGTCGCATCGCCATCAACTGA
Gene >Hirsu2|2236
ATGGCCTTCTTCCCGCGCAACTTCTACCAGCCGGAGTCGTCCTTCACGCCTCTCTTCCGCCTGCTCGACGACTTC
GACCACTACAGCCGCCAGTCGGGCGACCCGCACCAGCAGGGCCGTCGCACGGGCCTGCCCAGCTGGCAGCCCAAG
TTTGACATACGCGAGACGGGCGACAACTACGAGCTCCATGGCGAGCTGCCCGGCATGAACAAGGACAACGTCCAC
ATCGAGTTCGCCGACCCGCAGACGATGCACATCCGCGGCAGGGTCGAGCGCTCCTACTCGGCCGGCACGCCACCC
CACGCCGGCCAGGTCGAGGACGCGCCGGCCCGCCCGGCCATCACCGAGGGCGAGGCGGCGGCCAAAAACTCGCAT
CAGGCCAGCGTCGAGGACGAGGACGGCGACGGCTCGGAGAACCAGGCCGTCGTCGACAAGGCCGAGCCCCACCAG
CCGCAGAAGCCGGCGGACAAGGCCAAGTACTGGCTCACCGAGCGCAGCATCGGCGAGTTCTCGCGCAGCTTCAAC
TTCCCCGGACGCATTGACCAGGATGGTGTCTCGGCCAGCTTCAAGGACGGCATCCTGCATATCGTCGTCCCCAAG
GCCAAGAAGCACGAGTCTCGTCGCATCGCCATCAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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