© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2231 |
| Gene name | |
| Location | Contig_1519:5710..6113 |
| Strand | + |
| Gene length (bp) | 403 |
| Transcript length (bp) | 294 |
| Coding sequence length (bp) | 294 |
| Protein length (aa) | 98 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.4165 | 0.8056 | 0.0519 | 0.0975 | 0.1578 | 0.0326 | 0.0875 | 0.0851 | 0.0658 | 0.1107 |
| Orthofinder run ID | 4 |
| Orthogroup | 9015 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2231 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2231 MEGDAPDSQPGAGTPPRDFANSVLGSISRQARTSRRPLDSQAGGSDEDMIEEGDETEGDEGVVFERPRIVEMKRP MMDPKQQAGLLTELGSKVKKWR* |
| Coding | >Hirsu2|2231 ATGGAGGGCGACGCCCCGGACTCGCAGCCCGGCGCCGGCACGCCCCCGCGCGACTTCGCGAACAGCGTCCTCGGG AGCATCAGCCGCCAGGCCCGGACGTCGCGACGGCCCTTGGACTCCCAGGCGGGGGGCTCCGACGAGGACATGATC GAAGAGGGCGACGAGACCGAGGGCGACGAGGGCGTCGTCTTCGAGCGGCCGCGGATCGTCGAAATGAAGCGGCCA ATGATGGACCCCAAGCAGCAAGCCGGCCTCCTGACCGAGCTCGGCTCCAAGGTCAAGAAGTGGAGGTGA |
| Transcript | >Hirsu2|2231 ATGGAGGGCGACGCCCCGGACTCGCAGCCCGGCGCCGGCACGCCCCCGCGCGACTTCGCGAACAGCGTCCTCGGG AGCATCAGCCGCCAGGCCCGGACGTCGCGACGGCCCTTGGACTCCCAGGCGGGGGGCTCCGACGAGGACATGATC GAAGAGGGCGACGAGACCGAGGGCGACGAGGGCGTCGTCTTCGAGCGGCCGCGGATCGTCGAAATGAAGCGGCCA ATGATGGACCCCAAGCAGCAAGCCGGCCTCCTGACCGAGCTCGGCTCCAAGGTCAAGAAGTGGAGGTGA |
| Gene | >Hirsu2|2231 ATGGAGGGCGACGCCCCGGACTCGCAGCCCGGCGCCGGCACGCCCCCGCGCGACTTCGCGAACAGCGTCCTCGGG AGCATCAGCCGCCAGGCCCGGACGTCGCGACGGCCCTTGGACTCCCAGGCGGGGGGCTCCGACGAGGACATGATC GAAGAGGGCGACGAGACCGAGGGCGACGAGGGCGTCGTCTTCGAGCGGCCGCGGATCGTCGAAATGAAGCGGCCA ATGATGGACCCCAAGCAGCAAGCCGGCCTCCTGACCGAGCTCGGCTCCAAGGTCAAGAAGTACGAGGGAAGCGAC TCCGAGGGCGACGGCGTCACGACAGGCCCCTCCCACCCGAGCATGGAGTCGTCGTCCACGCCCCTCACCCCCGCC GACGGCGAAACGCCCAAGGTGGAGGTGA |