Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2225
Gene name
LocationContig_1518:228..846
Strand-
Gene length (bp)618
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11566 PI31_Prot_N PI31 proteasome regulator N-terminal 1.0E-46 27 170

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6521 0.293 0.1996 0.1977 0.3323 0.0528 0.1493 0.2097 0.3185 0.0107

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6059
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|50
Ophiocordyceps australis map64 (Brazil) OphauB2|5913
Ophiocordyceps camponoti-floridani Ophcf2|03083
Ophiocordyceps kimflemingae Ophio5|4113
Ophiocordyceps subramaniannii Hirsu2|2225 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2225
MASPLGAPAVLRRMADALPAHAKGDESSDIASSYELVALLAHAFFCALDFKLCALDEDKPLPATADGRDAAVPER
LPAHWNAVFGSLSFVYSHKQSSMRFVIRVDRMGGKVEVRGLAVGDDHIHRFERPVRDIVRSAALPIRITLTPAGD
EDRSDLPDKLRAAFLTEQAMAGTPPD*
Coding >Hirsu2|2225
ATGGCGTCGCCGCTCGGCGCCCCCGCGGTGCTCCGCCGCATGGCCGACGCCCTGCCCGCCCACGCCAAGGGCGAC
GAGTCGTCCGACATCGCGAGCTCGTACGAGCTCGTCGCCCTGCTCGCCCACGCCTTCTTCTGCGCCCTCGACTTC
AAGCTCTGCGCCCTCGACGAGGATAAGCCCCTTCCCGCCACGGCAGACGGCCGAGATGCTGCCGTGCCCGAGCGC
CTGCCCGCGCACTGGAACGCAGTCTTCGGCTCCCTGAGCTTCGTCTACTCCCACAAGCAGTCGTCGATGCGCTTC
GTCATCCGCGTCGACCGCATGGGCGGCAAGGTCGAGGTCCGCGGCCTCGCCGTCGGCGACGACCACATCCACCGC
TTCGAGCGCCCCGTCCGCGACATCGTCCGCTCCGCCGCCCTGCCCATCCGCATCACCCTGACGCCCGCCGGCGAC
GAGGACCGCTCCGACCTACCCGACAAGCTGCGCGCCGCCTTCCTCACCGAACAGGCCATGGCCGGTACTCCTCCT
GACTAG
Transcript >Hirsu2|2225
ATGGCGTCGCCGCTCGGCGCCCCCGCGGTGCTCCGCCGCATGGCCGACGCCCTGCCCGCCCACGCCAAGGGCGAC
GAGTCGTCCGACATCGCGAGCTCGTACGAGCTCGTCGCCCTGCTCGCCCACGCCTTCTTCTGCGCCCTCGACTTC
AAGCTCTGCGCCCTCGACGAGGATAAGCCCCTTCCCGCCACGGCAGACGGCCGAGATGCTGCCGTGCCCGAGCGC
CTGCCCGCGCACTGGAACGCAGTCTTCGGCTCCCTGAGCTTCGTCTACTCCCACAAGCAGTCGTCGATGCGCTTC
GTCATCCGCGTCGACCGCATGGGCGGCAAGGTCGAGGTCCGCGGCCTCGCCGTCGGCGACGACCACATCCACCGC
TTCGAGCGCCCCGTCCGCGACATCGTCCGCTCCGCCGCCCTGCCCATCCGCATCACCCTGACGCCCGCCGGCGAC
GAGGACCGCTCCGACCTACCCGACAAGCTGCGCGCCGCCTTCCTCACCGAACAGGCCATGGCCGGTACTCCTCCT
GACTAG
Gene >Hirsu2|2225
ATGGCGTCGCCGCTCGGCGCCCCCGCGGTGCTCCGCCGCATGGCCGACGCCCTGCCCGCCCACGCCAAGGGCGAC
GAGTCGTCCGACATCGCGAGCTCGTACGAGCTCGTCGCCCTGCTCGCCCACGCCTTCTTCTGCGCCCTCGACTTC
AAGCTCTGCGCCCTCGACGAGGATAAGCCCCTTCGTACGCCCGCCGTCCTCTCCGCGGCAGTGGCGTCGTGATCA
TGTGCTAAGAGCTCGCCCTCGCCCCGGCCCCCGACCTCTCCTGCAGCCGCCACGGCAGACGGCCGAGATGCTGCC
GTGCCCGAGCGCCTGCCCGCGCACTGGAACGCAGTCTTCGGCTCCCTGAGCTTCGTCTACTCCCACAAGCAGTCG
TCGATGCGCTTCGTCATCCGCGTCGACCGCATGGGCGGCAAGGTCGAGGTCCGCGGCCTCGCCGTCGGCGACGAC
CACATCCACCGCTTCGAGCGCCCCGTCCGCGACATCGTCCGCTCCGCCGCCCTGCCCATCCGCATCACCCTGACG
CCCGCCGGCGACGAGGACCGCTCCGACCTACCCGACAAGCTGCGCGCCGCCTTCCTCACCGAACAGGCCATGGCC
GGTACTCCTCCTGACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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