Protein ID | Hirsu2|2215 |
Gene name | |
Location | Contig_1514:40..2033 |
Strand | - |
Gene length (bp) | 1993 |
Transcript length (bp) | 1266 |
Coding sequence length (bp) | 1266 |
Protein length (aa) | 422 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Signal peptide|Transmembrane domain | 0.1373 | 0.1287 | 0.1375 | 0.6243 | 0.0846 | 0.0071 | 0.4227 | 0.4901 | 0.2914 | 0.0076 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
2 | 60 | 82 | 22 |
3 | 122 | 144 | 22 |
4 | 159 | 181 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 7517 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|2215 (this protein) |
Ophiocordyceps subramaniannii | Hirsu2|6000 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2215 MDLDVSLLYLITFFGIACLALILWTLKLLIRNPAIYYARYVRYPLLVNFRWLRATRLESAMFIVFLLINFGAILI PSFFPGWRQVQTRAALMAIVNTAPLCMGGRAPIVDALNIPRNWYLMLHSWIGVVAITEAATHSIIALSLRPRPGS LTQTGWANVILSAKGMGIVGILPLALHLALRRKHDDRIRDRMQQISVEDMDLWKQAKDSSGNSDLLTRRRSTLAE ERAGLSREYLNRDSAKKVIIFWSLEANSQMEWVKDQVKSLQNLDPANKLLIMWCGYPRPREGFKPFKDSRFWMCL DTGAVLSFDELIVSKIKEERARLPGNMGVIVCGDWSFCNKMRKGTIDSMKGSSISFMETEYHPRRIGSQDIKMEQ LAGRFNDRGRLRRRKNDEEEELRDMANHLSDARTYSVVSSLYSEAA* |
Coding | >Hirsu2|2215 ATGGACCTTGATGTGAGCTTGCTGTACCTCATTACCTTCTTTGGCATTGCCTGTCTAGCTCTGATCCTTTGGACA CTTAAACTTCTGATTCGCAACCCAGCAATCTACTATGCCAGATACGTTCGGTACCCTCTCCTGGTCAACTTCAGG TGGCTACGCGCGACCCGCCTCGAATCAGCGATGTTCATAGTCTTCCTCCTCATTAACTTCGGCGCTATTCTCATA CCTTCGTTCTTCCCCGGATGGAGGCAGGTTCAAACGAGAGCAGCCTTAATGGCTATCGTGAATACCGCCCCTCTC TGCATGGGTGGTCGGGCGCCTATTGTCGACGCATTGAATATTCCACGCAACTGGTATCTTATGCTACACTCCTGG ATCGGTGTGGTTGCTATCACGGAAGCTGCCACACATTCCATTATTGCTCTGAGCTTAAGGCCAAGGCCAGGCTCT TTGACTCAGACTGGCTGGGCAAATGTTATTCTATCGGCAAAGGGCATGGGCATTGTCGGCATTCTTCCTTTAGCC CTGCACTTGGCATTACGACGGAAACACGACGATCGGATCCGCGACAGAATGCAACAAATTAGCGTGGAAGACATG GATCTGTGGAAACAGGCAAAGGATTCTTCTGGCAACAGTGACTTACTGACTCGGCGGAGAAGCACGTTAGCCGAG GAGCGTGCGGGTCTTTCTCGAGAATATCTTAACCGAGACTCTGCAAAAAAAGTTATTATATTTTGGTCTCTTGAG GCCAATTCGCAGATGGAATGGGTGAAAGATCAGGTTAAATCGTTGCAAAATCTCGATCCGGCAAATAAATTGCTT ATCATGTGGTGCGGATATCCTCGTCCGAGAGAAGGATTTAAGCCTTTCAAGGACTCAAGATTTTGGATGTGCTTG GACACAGGAGCAGTTTTGAGCTTTGACGAATTAATTGTCTCCAAGATCAAAGAAGAGCGAGCGCGCCTACCAGGC AATATGGGAGTGATAGTTTGCGGAGACTGGTCATTCTGCAACAAGATGCGCAAGGGTACCATAGACAGTATGAAG GGTAGCTCAATCTCATTTATGGAGACTGAGTATCACCCCCGCAGAATTGGCAGTCAAGACATCAAGATGGAACAA CTTGCAGGCAGATTCAACGATCGGGGAAGACTCAGGCGGAGAAAGAATGACGAGGAAGAGGAGCTTCGGGACATG GCTAATCACTTGTCGGATGCAAGAACGTACTCCGTGGTCTCTAGCCTTTACTCGGAAGCAGCCTAG |
Transcript | >Hirsu2|2215 ATGGACCTTGATGTGAGCTTGCTGTACCTCATTACCTTCTTTGGCATTGCCTGTCTAGCTCTGATCCTTTGGACA CTTAAACTTCTGATTCGCAACCCAGCAATCTACTATGCCAGATACGTTCGGTACCCTCTCCTGGTCAACTTCAGG TGGCTACGCGCGACCCGCCTCGAATCAGCGATGTTCATAGTCTTCCTCCTCATTAACTTCGGCGCTATTCTCATA CCTTCGTTCTTCCCCGGATGGAGGCAGGTTCAAACGAGAGCAGCCTTAATGGCTATCGTGAATACCGCCCCTCTC TGCATGGGTGGTCGGGCGCCTATTGTCGACGCATTGAATATTCCACGCAACTGGTATCTTATGCTACACTCCTGG ATCGGTGTGGTTGCTATCACGGAAGCTGCCACACATTCCATTATTGCTCTGAGCTTAAGGCCAAGGCCAGGCTCT TTGACTCAGACTGGCTGGGCAAATGTTATTCTATCGGCAAAGGGCATGGGCATTGTCGGCATTCTTCCTTTAGCC CTGCACTTGGCATTACGACGGAAACACGACGATCGGATCCGCGACAGAATGCAACAAATTAGCGTGGAAGACATG GATCTGTGGAAACAGGCAAAGGATTCTTCTGGCAACAGTGACTTACTGACTCGGCGGAGAAGCACGTTAGCCGAG GAGCGTGCGGGTCTTTCTCGAGAATATCTTAACCGAGACTCTGCAAAAAAAGTTATTATATTTTGGTCTCTTGAG GCCAATTCGCAGATGGAATGGGTGAAAGATCAGGTTAAATCGTTGCAAAATCTCGATCCGGCAAATAAATTGCTT ATCATGTGGTGCGGATATCCTCGTCCGAGAGAAGGATTTAAGCCTTTCAAGGACTCAAGATTTTGGATGTGCTTG GACACAGGAGCAGTTTTGAGCTTTGACGAATTAATTGTCTCCAAGATCAAAGAAGAGCGAGCGCGCCTACCAGGC AATATGGGAGTGATAGTTTGCGGAGACTGGTCATTCTGCAACAAGATGCGCAAGGGTACCATAGACAGTATGAAG GGTAGCTCAATCTCATTTATGGAGACTGAGTATCACCCCCGCAGAATTGGCAGTCAAGACATCAAGATGGAACAA CTTGCAGGCAGATTCAACGATCGGGGAAGACTCAGGCGGAGAAAGAATGACGAGGAAGAGGAGCTTCGGGACATG GCTAATCACTTGTCGGATGCAAGAACGTACTCCGTGGTCTCTAGCCTTTACTCGGAAGCAGCCTAG |
Gene | >Hirsu2|2215 ATGGACCTTGATGTGAGCTTGCTGTACCTCATTACCTTCTTTGGCATTGCCTGTCTAGCTCTGATCCTTTGGACA CTTAAACTTCTGATTCGCAACCCAGCAATCTACTATGCCAGATACGTTCGGTACCCTCTCCTGGTCAACTTCAGG TGGCTACGCGCGACCCGCCTCGAATCAGCGATGTTCATAGTCTTCCTCCTCATTAACTTCGGCGCTATTCTCATA CCTTCGTTCTTCCCCGGATGGAGGCAGGTTCAAACGAGAGCAGCCTTAATGGCTATCGTGAATACCGCCCCTCTC TGCATGGGTGGTCGGGCGCCTATTGTCGACGCATTGAATATTCCACGCAACTGGTATCTTATGCTACACTCCTGG ATCGGTGTGGTTGCTATCACGGAAGCTGCCACACATTCCATTATTGCTCTGAGCTTAAGGCCAAGGCCAGGCTCT TTGACTCAGACTGGCTGGGCAGTAAGTTTTCGTCTAGCGCTCTTGACACCACCTTCTTGCTCAAATTTGAAGACT TTTGGTTTAATATTAGGCGCACCTCTCACCGCTTTTCCGCTGATCAAGCGGGCTCTTGGAAAGTGGTTTCTCTGG ACGCACAGGGCAGTATCGCTATGTGCACTCTCACTGCTCTTGAACCACGTACTCAATGCTCCATCTACACGATCC AGGGTTCTAATCGGAAGCTCGTGTGGGTTCTGGCTGGCCACAACTGCCTTCCGAGTCGTAAGAATCATATACTAC TGGCATACTGCAGAGATTATCGAGATCTCGGCGACTGCCGATACCGTGCAATTGGAAGTTTATCTCAATCGCCCC ATTCGCCTTCATGCGGGTTGCCACTTCCATATTTTTTTCCCATTTACTTGGTATCCCATGAAAAAAATGATGAAG TACAATCTGATGCATAGCTTCACTGGCGTTGCGTTCTGGCATCCTGCCTATGACAAGTCCCAGTCGGTCTCAAGC TTGAAGTTTTTGCTTTCGCGGCACGGAAGCCATAGAAGTGCAATTTCAAGATTGAAAGAGGGCCAATCGATTCTT TTAGATGGTCCGTATGGACAAGATCTAAACCTGCAAAATTTCCAGAATGTTATTCTATCGGCAAAGGGCATGGGC ATTGTCGGCATTCTTCCTTTAGCCCTGCACTTGGCATTACGACGGAAACACGACGATCGGATCCGCGACAGAATG CAACAAATTAGCGTGGAAGACATGGATCTGTGGAAACAGGCAAAGGATTCTTCTGGCAACAGTGACTTACTGACT CGGCGGAGAAGCACGTTAGCCGAGGAGCGTGCGGGTCTTTCTCGAGAATATCTTAACCGAGACTCTGCAAAAAAA GTTATTATATTTTGGTCTCTTGAGGCCAATTCGCAGATGGAATGGGTGAAAGATCAGGTTAAATCGTTGCAAAAT CTCGATCCGGCAAATGTGAGTGGACTCCAAAATGGCTGTTCGGACATTCAATCATCTAATATCTGGCTAGAAATT GCTTATCATGTGGTGCGGATATCCTCGTCCGAGAGAAGGATTTAAGCCTTTCAAGGACTCAAGATTTTGGATGTG CTTGGACACAGGAGCAGTTTTGAGCTTTGACGAATTAATTGTCTCCAAGATCAAAGAAGAGCGAGCGCGCCTACC AGGCAATATGGGAGTGATAGGTACGTGTATCGGCTTCCACTTACCTGGTCAATCATTCATGCTCGTAGTTTGCGG AGACTGGTCATTCTGCAACAAGATGCGCAAGGGTACCATAGACAGTATGAAGGGTAGCTCAATCTCATTTATGGA GACTGAGTATCACCCCCGCAGAATTGGCAGTCAAGACATCAAGATGGAACAACTTGCAGGCAGATTCAACGATCG GGGAAGACTCAGGCGGAGAAAGAATGACGAGGAAGAGGAGCTTCGGGACATGGCTAATCACTTGTCGGATGCAAG AACGTACTCCGTGGTCTCTAGCCTTTACTCGGAAGCAGCCTAG |