Protein ID | Hirsu2|2211 |
Gene name | |
Location | Contig_1512:5667..6117 |
Strand | - |
Gene length (bp) | 450 |
Transcript length (bp) | 450 |
Coding sequence length (bp) | 450 |
Protein length (aa) | 150 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13622 | 4HBT_3 | Thioesterase-like superfamily | 1.1E-21 | 2 | 130 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Peroxisome | Peroxisomal targeting signal | 0.2239 | 0.3868 | 0.0812 | 0.0558 | 0.173 | 0.0304 | 0.494 | 0.037 | 0.1589 | 0.7517 |
Orthofinder run ID | 4 |
Orthogroup | 752 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2211 MWMCLASGERITQAALAYVVDSFPFDMHTFLASPEARAALLRPPPRDADDGAEKEDEAEAARRHAERARMWLPTV VLNLEVKTALPPTGVDWLAMRATSKQIKDGRFDLDILVRDPDGELVALSHHVALILGMDRNLASRASSKSRAAL* |
Coding | >Hirsu2|2211 ATGTGGATGTGCCTGGCGAGCGGGGAGCGCATCACGCAGGCCGCGCTGGCCTACGTCGTCGACTCGTTCCCCTTC GACATGCACACCTTCCTGGCCTCGCCCGAGGCCCGCGCCGCCCTGCTCCGGCCGCCGCCGCGGGATGCCGACGAC GGGGCCGAGAAGGAGGACGAGGCCGAGGCCGCGCGCAGACACGCCGAGCGCGCCCGCATGTGGCTCCCCACCGTC GTGCTGAACCTCGAGGTCAAGACGGCCCTGCCGCCGACGGGCGTCGACTGGCTGGCCATGCGGGCGACGTCGAAG CAGATCAAGGACGGCAGATTCGATCTCGACATCCTCGTCCGCGACCCGGACGGGGAGCTGGTAGCCTTGAGCCAT CACGTTGCCCTGATCCTCGGCATGGACCGCAACCTGGCCAGTCGGGCCTCGAGCAAGAGCAGGGCCGCGTTGTGA |
Transcript | >Hirsu2|2211 ATGTGGATGTGCCTGGCGAGCGGGGAGCGCATCACGCAGGCCGCGCTGGCCTACGTCGTCGACTCGTTCCCCTTC GACATGCACACCTTCCTGGCCTCGCCCGAGGCCCGCGCCGCCCTGCTCCGGCCGCCGCCGCGGGATGCCGACGAC GGGGCCGAGAAGGAGGACGAGGCCGAGGCCGCGCGCAGACACGCCGAGCGCGCCCGCATGTGGCTCCCCACCGTC GTGCTGAACCTCGAGGTCAAGACGGCCCTGCCGCCGACGGGCGTCGACTGGCTGGCCATGCGGGCGACGTCGAAG CAGATCAAGGACGGCAGATTCGATCTCGACATCCTCGTCCGCGACCCGGACGGGGAGCTGGTAGCCTTGAGCCAT CACGTTGCCCTGATCCTCGGCATGGACCGCAACCTGGCCAGTCGGGCCTCGAGCAAGAGCAGGGCCGCGTTGTGA |
Gene | >Hirsu2|2211 ATGTGGATGTGCCTGGCGAGCGGGGAGCGCATCACGCAGGCCGCGCTGGCCTACGTCGTCGACTCGTTCCCCTTC GACATGCACACCTTCCTGGCCTCGCCCGAGGCCCGCGCCGCCCTGCTCCGGCCGCCGCCGCGGGATGCCGACGAC GGGGCCGAGAAGGAGGACGAGGCCGAGGCCGCGCGCAGACACGCCGAGCGCGCCCGCATGTGGCTCCCCACCGTC GTGCTGAACCTCGAGGTCAAGACGGCCCTGCCGCCGACGGGCGTCGACTGGCTGGCCATGCGGGCGACGTCGAAG CAGATCAAGGACGGCAGATTCGATCTCGACATCCTCGTCCGCGACCCGGACGGGGAGCTGGTAGCCTTGAGCCAT CACGTTGCCCTGATCCTCGGCATGGACCGCAACCTGGCCAGTCGGGCCTCGAGCAAGAGCAGGGCCGCGTTGTGA |